Protein ID | Ani_SJS100_1|g1026.t1 |
Gene name | |
Location | scaffold_003:633773..636173 |
Strand | - |
Gene length (bp) | 2400 |
Transcript length (bp) | 2307 |
Coding sequence length (bp) | 2307 |
Protein length (aa) | 769 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF08733 | PalH | PalH/RIM21 | 8.1E-111 | 28 | 385 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 12 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 86 | 108 | 22 |
2 | 227 | 246 | 19 |
3 | 268 | 290 | 22 |
4 | 303 | 325 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g1026.t1 MGEPAHLTPRQIWAQPTTTTTRTYEADCTPFLLPSSGYVYLNRSYSIALTENAIYDPICTGTGTATATAHAVAAL DVTDPFYSSVTPALYAMGCTTVVSYLLVIILLITPRTFYVGGPGGGANFLGRHGMISGSYSGNSSVVGVGGRPWL QKVAALLVAVSLTIATVDSFRVAEQQYYYGYSDAEALADEVIDGMEIRVVRIISSTFLWLAQIQTLIRLFPRHKE KIMIKWAGFALIVFDTTFSILDKFLVKTDTVHPRLYEDAIPALSYLFELALNLLYAAWVIFYSLSKHRFAFFHPK MRNICLVALLSLCAILIPVVFFVLDIAKPKIAGWGTYVRWVGSAAASVVVWEWVERIEALERDERKDGILGREIF DGDEMLEVTPSEEVDWPRYNPDGHDRGGGGGTSSGWGGMMGLAHRPLRTRVGRNWQSNLENQQHNIPMDPRRRRM APRPTPPPAAITPVSRADTTSAASTVYNIHYHPVSSPTPPVAMPHMEEEDEDIDETVAAKEMTTEGQQAGLAHDV LAQQQTREQSPQIVHVDKRWRALLNPFKRRRASLPREVASAQAEEEGNPAGAQVELQRHSLDDSDDEHSLQHRHD FRFGFHRRLRPGSGRQGSDSPLPVTVIPARRRGQQTWSPQQYHEPSSRTTTSNQRVPPGRDDLPVRVIQPQTRTA APWSAADGQGFSHGNYELRYDPEAAALVEPGENCTESQPALDADGSVSEPTRGPAGRQQPEQEFDPMEGAPLSPA QPFPDEVPEDSRGSHGQQ* |
Coding | >Ani_SJS100_1|g1026.t1 ATGGGGGAACCCGCTCATCTAACGCCTCGCCAAATTTGGGCTCAACCGACGACAACGACCACCAGGACCTATGAA GCTGACTGCACGCCGTTTCTATTACCCAGCTCTGGTTACGTCTATTTGAATCGCTCCTACTCCATCGCCTTGACC GAAAATGCCATCTACGATCCCATCTGTACGGGCACGGGCACAGCGACTGCCACGGCTCATGCGGTCGCCGCGCTC GATGTCACCGACCCTTTTTATTCCTCCGTGACCCCGGCGTTGTATGCCATGGGCTGTACGACCGTTGTCAGCTAT CTTCTCGTTATTATTCTTCTCATCACGCCGCGTACGTTTTATGTTGGAGGTCCTGGTGGGGGTGCGAACTTTCTC GGACGTCATGGTATGATTAGCGGTTCGTATAGTGGTAATTCGTCGGTGGTCGGCGTTGGTGGTCGCCCGTGGTTG CAGAAGGTCGCAGCCTTGTTAGTCGCGGTATCGCTCACCATCGCGACTGTGGACTCCTTCCGTGTGGCTGAACAG CAATACTATTATGGTTACTCCGATGCCGAAGCGCTGGCCGACGAGGTCATCGACGGTATGGAGATCCGGGTGGTC AGAATCATTTCCAGCACCTTTTTGTGGCTGGCCCAGATTCAGACTTTGATTCGGCTATTCCCTCGACATAAGGAG AAAATAATGATCAAATGGGCAGGGTTCGCGTTAATCGTGTTCGATACGACATTTAGTATCCTCGACAAGTTCTTG GTCAAAACCGATACCGTTCACCCACGGCTCTATGAAGACGCGATTCCCGCTCTCAGCTATCTGTTCGAACTTGCA CTCAACCTATTGTACGCCGCTTGGGTCATCTTCTATTCGCTTTCGAAACATCGCTTCGCCTTCTTCCATCCGAAA ATGAGGAACATCTGCTTGGTGGCCTTGCTATCGTTATGTGCGATCCTTATACCCGTTGTGTTTTTTGTCCTGGAT ATCGCAAAACCGAAAATCGCCGGATGGGGTACTTATGTCAGGTGGGTTGGTTCGGCTGCAGCAAGTGTCGTGGTT TGGGAATGGGTGGAGCGGATCGAAGCATTGGAACGCGATGAGAGGAAGGATGGGATTCTTGGACGCGAAATATTT GATGGAGATGAGATGTTGGAAGTGACCCCTTCGGAAGAAGTCGATTGGCCGCGCTACAATCCTGACGGCCATGAT CGAGGCGGAGGCGGTGGAACGTCTTCAGGATGGGGAGGCATGATGGGACTGGCTCATCGTCCTTTACGTACGAGG GTGGGTCGCAATTGGCAGTCGAACCTGGAGAACCAGCAACACAACATTCCCATGGACCCTCGGCGCCGGCGCATG GCACCCCGACCAACTCCTCCCCCAGCAGCTATAACGCCTGTTAGTCGGGCCGACACAACCAGCGCGGCCAGTACG GTATACAACATACATTATCATCCGGTGTCTAGTCCAACTCCACCGGTGGCCATGCCTCATATGGAGGAAGAGGAC GAAGACATAGACGAAACGGTGGCTGCGAAGGAGATGACAACCGAAGGTCAGCAAGCTGGCCTAGCTCATGATGTG CTGGCACAACAACAGACCCGGGAACAATCCCCTCAGATTGTGCACGTGGATAAAAGATGGCGAGCGCTGCTGAAT CCTTTCAAACGAAGGCGTGCATCTTTGCCAAGAGAAGTCGCGTCTGCACAGGCCGAGGAAGAAGGGAATCCCGCA GGTGCTCAAGTGGAACTGCAACGCCATTCTCTGGATGATAGCGACGATGAGCACAGCTTACAGCACAGGCACGAT TTTCGGTTTGGCTTCCATCGAAGATTGCGACCCGGTTCTGGACGACAAGGCTCCGACTCGCCCTTGCCAGTCACG GTCATTCCTGCTAGACGCCGTGGTCAACAGACCTGGTCGCCGCAGCAATATCATGAGCCTAGTTCACGAACAACA ACTTCGAATCAGCGTGTTCCGCCTGGCCGTGATGACCTGCCTGTAAGGGTGATTCAGCCGCAAACGCGAACTGCT GCTCCATGGAGCGCAGCCGATGGGCAAGGGTTCAGTCATGGCAACTATGAGCTGCGCTATGACCCTGAAGCTGCG GCACTTGTGGAACCTGGTGAGAATTGCACTGAATCTCAGCCGGCGCTGGACGCCGATGGCTCGGTCAGCGAGCCT ACTCGGGGGCCGGCTGGGCGCCAACAACCCGAGCAGGAATTCGACCCGATGGAAGGAGCACCTCTATCACCGGCT CAACCTTTTCCTGACGAGGTCCCCGAAGATTCACGAGGGTCACATGGCCAGCAGTGA |
Transcript | >Ani_SJS100_1|g1026.t1 ATGGGGGAACCCGCTCATCTAACGCCTCGCCAAATTTGGGCTCAACCGACGACAACGACCACCAGGACCTATGAA GCTGACTGCACGCCGTTTCTATTACCCAGCTCTGGTTACGTCTATTTGAATCGCTCCTACTCCATCGCCTTGACC GAAAATGCCATCTACGATCCCATCTGTACGGGCACGGGCACAGCGACTGCCACGGCTCATGCGGTCGCCGCGCTC GATGTCACCGACCCTTTTTATTCCTCCGTGACCCCGGCGTTGTATGCCATGGGCTGTACGACCGTTGTCAGCTAT CTTCTCGTTATTATTCTTCTCATCACGCCGCGTACGTTTTATGTTGGAGGTCCTGGTGGGGGTGCGAACTTTCTC GGACGTCATGGTATGATTAGCGGTTCGTATAGTGGTAATTCGTCGGTGGTCGGCGTTGGTGGTCGCCCGTGGTTG CAGAAGGTCGCAGCCTTGTTAGTCGCGGTATCGCTCACCATCGCGACTGTGGACTCCTTCCGTGTGGCTGAACAG CAATACTATTATGGTTACTCCGATGCCGAAGCGCTGGCCGACGAGGTCATCGACGGTATGGAGATCCGGGTGGTC AGAATCATTTCCAGCACCTTTTTGTGGCTGGCCCAGATTCAGACTTTGATTCGGCTATTCCCTCGACATAAGGAG AAAATAATGATCAAATGGGCAGGGTTCGCGTTAATCGTGTTCGATACGACATTTAGTATCCTCGACAAGTTCTTG GTCAAAACCGATACCGTTCACCCACGGCTCTATGAAGACGCGATTCCCGCTCTCAGCTATCTGTTCGAACTTGCA CTCAACCTATTGTACGCCGCTTGGGTCATCTTCTATTCGCTTTCGAAACATCGCTTCGCCTTCTTCCATCCGAAA ATGAGGAACATCTGCTTGGTGGCCTTGCTATCGTTATGTGCGATCCTTATACCCGTTGTGTTTTTTGTCCTGGAT ATCGCAAAACCGAAAATCGCCGGATGGGGTACTTATGTCAGGTGGGTTGGTTCGGCTGCAGCAAGTGTCGTGGTT TGGGAATGGGTGGAGCGGATCGAAGCATTGGAACGCGATGAGAGGAAGGATGGGATTCTTGGACGCGAAATATTT GATGGAGATGAGATGTTGGAAGTGACCCCTTCGGAAGAAGTCGATTGGCCGCGCTACAATCCTGACGGCCATGAT CGAGGCGGAGGCGGTGGAACGTCTTCAGGATGGGGAGGCATGATGGGACTGGCTCATCGTCCTTTACGTACGAGG GTGGGTCGCAATTGGCAGTCGAACCTGGAGAACCAGCAACACAACATTCCCATGGACCCTCGGCGCCGGCGCATG GCACCCCGACCAACTCCTCCCCCAGCAGCTATAACGCCTGTTAGTCGGGCCGACACAACCAGCGCGGCCAGTACG GTATACAACATACATTATCATCCGGTGTCTAGTCCAACTCCACCGGTGGCCATGCCTCATATGGAGGAAGAGGAC GAAGACATAGACGAAACGGTGGCTGCGAAGGAGATGACAACCGAAGGTCAGCAAGCTGGCCTAGCTCATGATGTG CTGGCACAACAACAGACCCGGGAACAATCCCCTCAGATTGTGCACGTGGATAAAAGATGGCGAGCGCTGCTGAAT CCTTTCAAACGAAGGCGTGCATCTTTGCCAAGAGAAGTCGCGTCTGCACAGGCCGAGGAAGAAGGGAATCCCGCA GGTGCTCAAGTGGAACTGCAACGCCATTCTCTGGATGATAGCGACGATGAGCACAGCTTACAGCACAGGCACGAT TTTCGGTTTGGCTTCCATCGAAGATTGCGACCCGGTTCTGGACGACAAGGCTCCGACTCGCCCTTGCCAGTCACG GTCATTCCTGCTAGACGCCGTGGTCAACAGACCTGGTCGCCGCAGCAATATCATGAGCCTAGTTCACGAACAACA ACTTCGAATCAGCGTGTTCCGCCTGGCCGTGATGACCTGCCTGTAAGGGTGATTCAGCCGCAAACGCGAACTGCT GCTCCATGGAGCGCAGCCGATGGGCAAGGGTTCAGTCATGGCAACTATGAGCTGCGCTATGACCCTGAAGCTGCG GCACTTGTGGAACCTGGTGAGAATTGCACTGAATCTCAGCCGGCGCTGGACGCCGATGGCTCGGTCAGCGAGCCT ACTCGGGGGCCGGCTGGGCGCCAACAACCCGAGCAGGAATTCGACCCGATGGAAGGAGCACCTCTATCACCGGCT CAACCTTTTCCTGACGAGGTCCCCGAAGATTCACGAGGGTCACATGGCCAGCAGTGA |
Gene | >Ani_SJS100_1|g1026.t1 ATGGGGGAACCCGCTCATCTAACGCCTCGCCAAATTTGGGCTCAACCGACGACAACGACCACCAGGACCTATGAA GCTGACTGCACGCCGTTTCTATTACCCAGCTCTGGTATGTGGATTTGTGCTGGGCCCAATGCGGGCCGTCAAGCA ACTCGCTTCCGTATGGTTACACTGACGCGGCGCTTCGGTGGGTGCTTTGCAGGTTACGTCTATTTGAATCGCTCC TACTCCATCGCCTTGACCGAAAATGCCATCTACGATCCCATCTGTACGGGCACGGGCACAGCGACTGCCACGGCT CATGCGGTCGCCGCGCTCGATGTCACCGACCCTTTTTATTCCTCCGTGACCCCGGCGTTGTATGCCATGGGCTGT ACGACCGTTGTCAGCTATCTTCTCGTTATTATTCTTCTCATCACGCCGCGTACGTTTTATGTTGGAGGTCCTGGT GGGGGTGCGAACTTTCTCGGACGTCATGGTATGATTAGCGGTTCGTATAGTGGTAATTCGTCGGTGGTCGGCGTT GGTGGTCGCCCGTGGTTGCAGAAGGTCGCAGCCTTGTTAGTCGCGGTATCGCTCACCATCGCGACTGTGGACTCC TTCCGTGTGGCTGAACAGCAATACTATTATGGTTACTCCGATGCCGAAGCGCTGGCCGACGAGGTCATCGACGGT ATGGAGATCCGGGTGGTCAGAATCATTTCCAGCACCTTTTTGTGGCTGGCCCAGATTCAGACTTTGATTCGGCTA TTCCCTCGACATAAGGAGAAAATAATGATCAAATGGGCAGGGTTCGCGTTAATCGTGTTCGATACGACATTTAGT ATCCTCGACAAGTTCTTGGTCAAAACCGATACCGTTCACCCACGGCTCTATGAAGACGCGATTCCCGCTCTCAGC TATCTGTTCGAACTTGCACTCAACCTATTGTACGCCGCTTGGGTCATCTTCTATTCGCTTTCGAAACATCGCTTC GCCTTCTTCCATCCGAAAATGAGGAACATCTGCTTGGTGGCCTTGCTATCGTTATGTGCGATCCTTATACCCGTT GTGTTTTTTGTCCTGGATATCGCAAAACCGAAAATCGCCGGATGGGGTACTTATGTCAGGTGGGTTGGTTCGGCT GCAGCAAGTGTCGTGGTTTGGGAATGGGTGGAGCGGATCGAAGCATTGGAACGCGATGAGAGGAAGGATGGGATT CTTGGACGCGAAATATTTGATGGAGATGAGATGTTGGAAGTGACCCCTTCGGAAGAAGTCGATTGGCCGCGCTAC AATCCTGACGGCCATGATCGAGGCGGAGGCGGTGGAACGTCTTCAGGATGGGGAGGCATGATGGGACTGGCTCAT CGTCCTTTACGTACGAGGGTGGGTCGCAATTGGCAGTCGAACCTGGAGAACCAGCAACACAACATTCCCATGGAC CCTCGGCGCCGGCGCATGGCACCCCGACCAACTCCTCCCCCAGCAGCTATAACGCCTGTTAGTCGGGCCGACACA ACCAGCGCGGCCAGTACGGTATACAACATACATTATCATCCGGTGTCTAGTCCAACTCCACCGGTGGCCATGCCT CATATGGAGGAAGAGGACGAAGACATAGACGAAACGGTGGCTGCGAAGGAGATGACAACCGAAGGTCAGCAAGCT GGCCTAGCTCATGATGTGCTGGCACAACAACAGACCCGGGAACAATCCCCTCAGATTGTGCACGTGGATAAAAGA TGGCGAGCGCTGCTGAATCCTTTCAAACGAAGGCGTGCATCTTTGCCAAGAGAAGTCGCGTCTGCACAGGCCGAG GAAGAAGGGAATCCCGCAGGTGCTCAAGTGGAACTGCAACGCCATTCTCTGGATGATAGCGACGATGAGCACAGC TTACAGCACAGGCACGATTTTCGGTTTGGCTTCCATCGAAGATTGCGACCCGGTTCTGGACGACAAGGCTCCGAC TCGCCCTTGCCAGTCACGGTCATTCCTGCTAGACGCCGTGGTCAACAGACCTGGTCGCCGCAGCAATATCATGAG CCTAGTTCACGAACAACAACTTCGAATCAGCGTGTTCCGCCTGGCCGTGATGACCTGCCTGTAAGGGTGATTCAG CCGCAAACGCGAACTGCTGCTCCATGGAGCGCAGCCGATGGGCAAGGGTTCAGTCATGGCAACTATGAGCTGCGC TATGACCCTGAAGCTGCGGCACTTGTGGAACCTGGTGAGAATTGCACTGAATCTCAGCCGGCGCTGGACGCCGAT GGCTCGGTCAGCGAGCCTACTCGGGGGCCGGCTGGGCGCCAACAACCCGAGCAGGAATTCGACCCGATGGAAGGA GCACCTCTATCACCGGCTCAACCTTTTCCTGACGAGGTCCCCGAAGATTCACGAGGGTCACATGGCCAGCAGTGA |