Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g10254.t1
Gene name
Locationscaffold_110:65339..67430
Strand+
Gene length (bp)2091
Transcript length (bp)1983
Coding sequence length (bp)1983
Protein length (aa) 661

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00505 HMG_box HMG (high mobility group) box 2.0E-22 112 180
PF09011 HMG_box_2 HMG-box domain 4.8E-08 114 179

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 68 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
HMG

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g10254.t1
MNDDVAKVSMMDRHLDTAALSGHRRFTDTLPPVHLTSLNRSKVALNKVASNAASAIETPKPTNFLATKAIPLRER
SSLSERSSSSSPIKSSNAPTPRESATQFCLCQPDPKIPRPRNAFILYRQHYQAAVVAQNPGLANPEISKIIGEQW
RGLPQETKDEWKALAEEEKARHQQQYPEYRYQPRRYGRDGNLRSGASGISHNPPGSTVCSRCGGRVMNPPVSPET
PYTPRASFFGGKSAPGEVFSARSNQCRAKDLDRAPNVIKLIPNGNGESRLPRQHFVESRSRSPDNKRRRLGPLGP
YDIRERSPDSSYPASPYTPRSAVADSRGLYQPLQQPRPGRNFKEYTPPDPSLKLPPLQTATHVPGTITPTTPYSH
DGPSIEATVMTIPFLNKIKVLAKISPPLTPAYHDGSSFRRGAVIAVDGQDPVLVKIMVEFLNNTLQKEGRYHTQI
FGGPEIRSRESYSESEQMGDATVDYLNIISSWHRISDEIVSFVKPSRASSESKSVDEESTPGVSPRTIIPKTADL
QINSPEQLSDNSSVSTVSTGLGSITMPVPVALVPRYQLTTADAFACSVPIGDSYAPLDHWQWMASLWRACVGPDI
TVYIRECEKDELERLGGSPVEVRLHDARTIVVRRLASSPSELEEKSLKRVGFEIEDFLTQ*
Coding >Ani_SJS100_1|g10254.t1
ATGAATGACGATGTCGCTAAAGTGTCTATGATGGACCGTCATCTGGACACTGCTGCTTTAAGTGGTCATCGTCGA
TTCACTGACACACTGCCTCCGGTACATCTGACCTCTCTGAATCGAAGCAAGGTAGCTCTCAACAAAGTCGCCTCC
AACGCTGCCTCTGCTATTGAAACCCCGAAGCCCACGAACTTTCTAGCTACAAAGGCTATTCCTCTTCGTGAACGC
TCATCTTTGTCAGAACGTTCGTCGTCATCTAGTCCAATCAAGTCATCCAATGCTCCCACCCCAAGGGAGTCGGCC
ACACAGTTCTGCCTCTGTCAGCCGGATCCGAAGATCCCTAGGCCTCGAAATGCGTTCATCTTATACCGCCAACAT
TACCAAGCTGCAGTGGTCGCGCAGAACCCAGGCCTTGCCAATCCTGAAATCTCCAAAATTATTGGGGAGCAATGG
AGAGGGCTTCCACAGGAGACAAAGGATGAGTGGAAAGCACTGGCAGAGGAGGAGAAAGCTCGGCACCAACAACAA
TACCCGGAGTATCGCTATCAGCCTCGTCGCTACGGTCGGGATGGGAATCTCCGGAGCGGAGCATCTGGCATCAGC
CATAACCCTCCAGGCTCTACAGTCTGCAGCCGATGTGGAGGCCGTGTGATGAACCCTCCAGTATCACCGGAGACT
CCTTATACACCCAGGGCCTCCTTTTTCGGTGGAAAATCGGCACCTGGGGAGGTCTTTTCAGCACGCAGTAACCAG
TGTCGCGCCAAAGATCTGGACCGTGCTCCTAATGTCATCAAGCTTATCCCCAATGGTAATGGGGAATCACGCTTG
CCTCGTCAGCATTTTGTGGAAAGCAGAAGCCGATCACCGGATAATAAGCGCAGGCGGTTGGGACCGCTTGGTCCT
TACGATATCCGTGAAAGAAGCCCGGATTCTTCATATCCTGCATCTCCATACACTCCTCGCTCGGCAGTAGCAGAC
TCACGAGGTCTGTACCAGCCGCTACAGCAGCCACGGCCCGGCCGAAATTTCAAGGAGTATACCCCGCCGGATCCC
AGCTTGAAACTTCCACCGCTACAAACAGCTACTCATGTCCCCGGAACTATCACCCCAACGACTCCATATTCGCAT
GATGGACCTAGCATCGAAGCCACCGTCATGACAATCCCGTTTCTCAACAAGATAAAGGTCTTGGCTAAGATCTCC
CCGCCCTTGACGCCGGCATACCATGATGGATCGTCGTTCCGACGTGGGGCTGTGATAGCCGTGGATGGACAAGAT
CCTGTTCTTGTTAAAATAATGGTCGAATTTTTGAACAATACATTACAGAAGGAGGGTAGGTATCATACCCAAATC
TTCGGAGGACCTGAGATTCGGTCTCGTGAGAGCTACTCCGAATCCGAGCAAATGGGTGATGCAACTGTCGACTAC
CTCAATATCATCTCCTCATGGCACCGCATCTCCGACGAAATAGTCAGCTTCGTGAAGCCTTCACGAGCATCATCG
GAGTCAAAGTCAGTTGACGAAGAATCCACGCCAGGAGTGTCGCCACGGACTATTATACCCAAGACTGCTGATTTA
CAGATCAACTCTCCCGAGCAATTGAGCGATAATAGCTCTGTTTCGACAGTCTCCACCGGATTGGGTTCCATTACG
ATGCCCGTGCCTGTCGCACTTGTTCCCCGATACCAACTAACGACCGCGGATGCTTTTGCTTGCTCCGTCCCGATC
GGGGATTCGTATGCACCACTTGACCACTGGCAGTGGATGGCATCTCTGTGGAGGGCGTGCGTAGGACCGGACATA
ACCGTGTACATCCGAGAATGCGAGAAGGACGAACTAGAGCGTCTTGGAGGCAGCCCCGTGGAAGTTCGTCTTCAT
GATGCACGAACCATTGTGGTTCGAAGACTGGCATCCTCACCAAGCGAACTGGAGGAAAAGTCACTTAAGAGAGTC
GGCTTCGAGATTGAGGACTTTCTCACCCAATGA
Transcript >Ani_SJS100_1|g10254.t1
ATGAATGACGATGTCGCTAAAGTGTCTATGATGGACCGTCATCTGGACACTGCTGCTTTAAGTGGTCATCGTCGA
TTCACTGACACACTGCCTCCGGTACATCTGACCTCTCTGAATCGAAGCAAGGTAGCTCTCAACAAAGTCGCCTCC
AACGCTGCCTCTGCTATTGAAACCCCGAAGCCCACGAACTTTCTAGCTACAAAGGCTATTCCTCTTCGTGAACGC
TCATCTTTGTCAGAACGTTCGTCGTCATCTAGTCCAATCAAGTCATCCAATGCTCCCACCCCAAGGGAGTCGGCC
ACACAGTTCTGCCTCTGTCAGCCGGATCCGAAGATCCCTAGGCCTCGAAATGCGTTCATCTTATACCGCCAACAT
TACCAAGCTGCAGTGGTCGCGCAGAACCCAGGCCTTGCCAATCCTGAAATCTCCAAAATTATTGGGGAGCAATGG
AGAGGGCTTCCACAGGAGACAAAGGATGAGTGGAAAGCACTGGCAGAGGAGGAGAAAGCTCGGCACCAACAACAA
TACCCGGAGTATCGCTATCAGCCTCGTCGCTACGGTCGGGATGGGAATCTCCGGAGCGGAGCATCTGGCATCAGC
CATAACCCTCCAGGCTCTACAGTCTGCAGCCGATGTGGAGGCCGTGTGATGAACCCTCCAGTATCACCGGAGACT
CCTTATACACCCAGGGCCTCCTTTTTCGGTGGAAAATCGGCACCTGGGGAGGTCTTTTCAGCACGCAGTAACCAG
TGTCGCGCCAAAGATCTGGACCGTGCTCCTAATGTCATCAAGCTTATCCCCAATGGTAATGGGGAATCACGCTTG
CCTCGTCAGCATTTTGTGGAAAGCAGAAGCCGATCACCGGATAATAAGCGCAGGCGGTTGGGACCGCTTGGTCCT
TACGATATCCGTGAAAGAAGCCCGGATTCTTCATATCCTGCATCTCCATACACTCCTCGCTCGGCAGTAGCAGAC
TCACGAGGTCTGTACCAGCCGCTACAGCAGCCACGGCCCGGCCGAAATTTCAAGGAGTATACCCCGCCGGATCCC
AGCTTGAAACTTCCACCGCTACAAACAGCTACTCATGTCCCCGGAACTATCACCCCAACGACTCCATATTCGCAT
GATGGACCTAGCATCGAAGCCACCGTCATGACAATCCCGTTTCTCAACAAGATAAAGGTCTTGGCTAAGATCTCC
CCGCCCTTGACGCCGGCATACCATGATGGATCGTCGTTCCGACGTGGGGCTGTGATAGCCGTGGATGGACAAGAT
CCTGTTCTTGTTAAAATAATGGTCGAATTTTTGAACAATACATTACAGAAGGAGGGTAGGTATCATACCCAAATC
TTCGGAGGACCTGAGATTCGGTCTCGTGAGAGCTACTCCGAATCCGAGCAAATGGGTGATGCAACTGTCGACTAC
CTCAATATCATCTCCTCATGGCACCGCATCTCCGACGAAATAGTCAGCTTCGTGAAGCCTTCACGAGCATCATCG
GAGTCAAAGTCAGTTGACGAAGAATCCACGCCAGGAGTGTCGCCACGGACTATTATACCCAAGACTGCTGATTTA
CAGATCAACTCTCCCGAGCAATTGAGCGATAATAGCTCTGTTTCGACAGTCTCCACCGGATTGGGTTCCATTACG
ATGCCCGTGCCTGTCGCACTTGTTCCCCGATACCAACTAACGACCGCGGATGCTTTTGCTTGCTCCGTCCCGATC
GGGGATTCGTATGCACCACTTGACCACTGGCAGTGGATGGCATCTCTGTGGAGGGCGTGCGTAGGACCGGACATA
ACCGTGTACATCCGAGAATGCGAGAAGGACGAACTAGAGCGTCTTGGAGGCAGCCCCGTGGAAGTTCGTCTTCAT
GATGCACGAACCATTGTGGTTCGAAGACTGGCATCCTCACCAAGCGAACTGGAGGAAAAGTCACTTAAGAGAGTC
GGCTTCGAGATTGAGGACTTTCTCACCCAATGA
Gene >Ani_SJS100_1|g10254.t1
ATGAATGACGATGTCGCTAAAGTGTCTATGATGGACCGTCATCTGGACACTGCTGCTTTAAGTGGTCATCGTCGA
TTCACTGACACACTGCCTCCGGTACATCTGACCTCTCTGAATCGAAGCAAGGTAGCTCTCAACAAAGTCGCCTCC
AACGCTGCCTCTGCTATTGAAACCCCGAAGCCCACGAACTTTCTAGCTACAAAGGCTATTCCTCTTCGTGAACGC
TCATCTTTGTCAGAACGTTCGTCGTCATCTAGTCCAATCAAGTCATCCAATGCTCCCACCCCAAGGGAGTCGGCC
ACACAGTTCTGCCTCTGTCAGCCGGATCCGAAGATCCCTAGGCCTCGAAATGGTATGCAAGCTTGAAATCTGCTC
GATTTGTTTCTTGAGCTGACAAACAGGTTAAAGCGTTCATCTTATACCGCCAACATTACCAAGCTGCAGTGGTCG
CGCAGAACCCAGGCCTTGCCAATCCTGAAATCTCCAAAATTATTGGGGAGCAATGGAGAGGGCTTCCACAGGAGA
CAAAGGATGAGTGGAAAGCACTGGCAGAGGTAAGTGCATGTACTGTATCTATCTTTGAGTGGACCACCTAACTCT
TGACAGGAGGAGAAAGCTCGGCACCAACAACAATACCCGGAGTATCGCTATCAGCCTCGTCGCTACGGTCGGGAT
GGGAATCTCCGGAGCGGAGCATCTGGCATCAGCCATAACCCTCCAGGCTCTACAGTCTGCAGCCGATGTGGAGGC
CGTGTGATGAACCCTCCAGTATCACCGGAGACTCCTTATACACCCAGGGCCTCCTTTTTCGGTGGAAAATCGGCA
CCTGGGGAGGTCTTTTCAGCACGCAGTAACCAGTGTCGCGCCAAAGATCTGGACCGTGCTCCTAATGTCATCAAG
CTTATCCCCAATGGTAATGGGGAATCACGCTTGCCTCGTCAGCATTTTGTGGAAAGCAGAAGCCGATCACCGGAT
AATAAGCGCAGGCGGTTGGGACCGCTTGGTCCTTACGATATCCGTGAAAGAAGCCCGGATTCTTCATATCCTGCA
TCTCCATACACTCCTCGCTCGGCAGTAGCAGACTCACGAGGTCTGTACCAGCCGCTACAGCAGCCACGGCCCGGC
CGAAATTTCAAGGAGTATACCCCGCCGGATCCCAGCTTGAAACTTCCACCGCTACAAACAGCTACTCATGTCCCC
GGAACTATCACCCCAACGACTCCATATTCGCATGATGGACCTAGCATCGAAGCCACCGTCATGACAATCCCGTTT
CTCAACAAGATAAAGGTCTTGGCTAAGATCTCCCCGCCCTTGACGCCGGCATACCATGATGGATCGTCGTTCCGA
CGTGGGGCTGTGATAGCCGTGGATGGACAAGATCCTGTTCTTGTTAAAATAATGGTCGAATTTTTGAACAATACA
TTACAGAAGGAGGGTAGGTATCATACCCAAATCTTCGGAGGACCTGAGATTCGGTCTCGTGAGAGCTACTCCGAA
TCCGAGCAAATGGGTGATGCAACTGTCGACTACCTCAATATCATCTCCTCATGGCACCGCATCTCCGACGAAATA
GTCAGCTTCGTGAAGCCTTCACGAGCATCATCGGAGTCAAAGTCAGTTGACGAAGAATCCACGCCAGGAGTGTCG
CCACGGACTATTATACCCAAGACTGCTGATTTACAGATCAACTCTCCCGAGCAATTGAGCGATAATAGCTCTGTT
TCGACAGTCTCCACCGGATTGGGTTCCATTACGATGCCCGTGCCTGTCGCACTTGTTCCCCGATACCAACTAACG
ACCGCGGATGCTTTTGCTTGCTCCGTCCCGATCGGGGATTCGTATGCACCACTTGACCACTGGCAGTGGATGGCA
TCTCTGTGGAGGGCGTGCGTAGGACCGGACATAACCGTGTACATCCGAGAATGCGAGAAGGACGAACTAGAGCGT
CTTGGAGGCAGCCCCGTGGAAGTTCGTCTTCATGATGCACGAACCATTGTGGTTCGAAGACTGGCATCCTCACCA
AGCGAACTGGAGGAAAAGTCACTTAAGAGAGTCGGCTTCGAGATTGAGGACTTTCTCACCCAATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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