© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS100_1|g10186.t1 |
| Gene name | |
| Location | scaffold_108:36902..38561 |
| Strand | + |
| Gene length (bp) | 1659 |
| Transcript length (bp) | 1659 |
| Coding sequence length (bp) | 1659 |
| Protein length (aa) | 553 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 8.3E-41 | 124 | 504 |
| PF00083 | Sugar_tr | Sugar (and other) transporter | 5.5E-10 | 153 | 537 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 121 | 143 | 22 |
| 2 | 153 | 175 | 22 |
| 3 | 187 | 209 | 22 |
| 4 | 213 | 235 | 22 |
| 5 | 242 | 264 | 22 |
| 6 | 279 | 301 | 22 |
| 7 | 351 | 373 | 22 |
| 8 | 383 | 405 | 22 |
| 9 | 425 | 447 | 22 |
| 10 | 451 | 473 | 22 |
| 11 | 486 | 508 | 22 |
| 12 | 518 | 540 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g10186.t1 MSSTPDPANGQSHRALYRTETRQSLENRGISEKAPPTDYNYPDVGREENPVFPEEYTVETNTGLVPERTLEQMRS RTYSHHTSSSDIEKAKEPAEFVTFTINDPENPFNWSRTYRWYVTMIASLLVVCIAYGSSIVTGGLGLIEEKYHVS LEVATLTCSIMVCGFAVGPLLWSPLSEIIGRRPVYIISLALYTIFNIPCALSPNIGGLLVCRFLCGVFSSSGLSL AGGTIADIWNLEDRGMAIAFFAAAPYCGPVIGPIVCGWITVGSHRLDLFFWTNMAFCGAVMILVGLIPETYAPVI LKRRAARLRKETGNPNIITEQEKHKLTLHDIIRTSLIRPITMILTEPVLDLMCMYIVLIYSMLYAFFFAYPVIFG KLYNYNDGQIGLMFIPILIGAGFSLLFTPLVEKHFHRICLSRSPTPEDRLIGALIGAPFVPISLFILGATSYKHI IWVGPASSGIAFGFGMVLCYYAVNNYIIDSYQKYAASALAAKVFLRSGGGAAFPLFITQMYDRLGLQWASWLLAF IGVGMVFIPYVFYLFGARLRGKLGRKE* |
| Coding | >Ani_SJS100_1|g10186.t1 ATGTCATCAACACCAGACCCGGCCAACGGCCAGTCCCATCGTGCCCTATACAGGACAGAAACAAGACAATCCCTC GAGAACCGCGGGATATCAGAAAAAGCACCTCCAACAGACTACAACTACCCCGATGTCGGACGAGAAGAAAACCCC GTCTTCCCAGAGGAATACACCGTTGAGACCAACACTGGCCTCGTCCCCGAAAGAACTCTCGAACAGATGCGCTCC CGCACATACTCACATCACACATCCAGCTCCGACATCGAAAAAGCCAAAGAGCCAGCAGAATTCGTGACCTTCACC ATCAATGATCCCGAGAACCCCTTCAACTGGTCCCGCACGTACCGCTGGTACGTCACAATGATCGCCTCCCTTCTC GTCGTCTGCATTGCCTACGGCTCCTCCATCGTCACCGGCGGCCTCGGCCTCATCGAAGAGAAATATCACGTTTCT CTCGAAGTCGCGACCCTCACCTGCTCCATCATGGTCTGCGGCTTCGCAGTCGGCCCTCTCCTCTGGTCGCCTCTC TCCGAGATCATCGGCCGCCGTCCCGTCTACATCATCTCCCTTGCCCTCTACACCATCTTCAACATCCCCTGCGCC CTCTCTCCCAACATCGGCGGCCTCCTCGTCTGCCGCTTCCTCTGCGGCGTCTTCTCCAGCTCCGGCCTCTCTCTC GCCGGCGGCACCATCGCCGACATTTGGAACCTCGAAGACCGCGGCATGGCCATCGCCTTCTTCGCCGCAGCCCCC TACTGCGGGCCCGTCATCGGCCCCATAGTCTGCGGCTGGATCACCGTCGGCTCCCACCGTCTCGATCTCTTCTTC TGGACTAACATGGCCTTCTGCGGCGCCGTAATGATCCTCGTCGGTCTCATCCCAGAGACCTACGCCCCCGTGATC TTGAAACGCCGCGCCGCCCGTCTCCGCAAAGAGACCGGAAACCCCAACATCATCACCGAGCAGGAGAAACACAAA CTCACTCTGCACGATATCATCCGCACCAGTCTCATCCGCCCTATCACCATGATCCTCACCGAACCCGTCCTCGAC CTCATGTGCATGTACATCGTGCTCATCTACAGCATGCTCTACGCCTTCTTCTTCGCCTACCCGGTCATCTTCGGA AAACTGTACAACTACAACGACGGCCAGATCGGTCTGATGTTCATCCCTATTCTCATCGGCGCGGGCTTCTCCCTC CTCTTTACTCCACTCGTCGAGAAGCACTTCCACCGGATATGTCTCTCCCGTTCGCCTACCCCGGAAGATAGACTC ATTGGTGCGCTGATTGGCGCGCCGTTCGTGCCTATCTCCCTGTTTATTTTGGGTGCTACGTCCTATAAACATATC ATCTGGGTTGGGCCGGCCTCGTCGGGAATTGCGTTTGGGTTTGGCATGGTGCTGTGTTATTATGCGGTCAATAAC TACATCATTGATAGTTATCAGAAGTATGCGGCCTCGGCGCTGGCTGCGAAGGTTTTCTTGAGATCCGGGGGAGGA GCGGCGTTCCCGCTGTTCATTACCCAGATGTATGACCGGTTGGGGTTGCAGTGGGCGTCGTGGTTGTTGGCATTT ATTGGGGTGGGGATGGTGTTCATTCCGTATGTGTTTTACTTGTTTGGCGCGAGGCTGAGGGGGAAGTTGGGAAGG AAGGAGTAG |
| Transcript | >Ani_SJS100_1|g10186.t1 ATGTCATCAACACCAGACCCGGCCAACGGCCAGTCCCATCGTGCCCTATACAGGACAGAAACAAGACAATCCCTC GAGAACCGCGGGATATCAGAAAAAGCACCTCCAACAGACTACAACTACCCCGATGTCGGACGAGAAGAAAACCCC GTCTTCCCAGAGGAATACACCGTTGAGACCAACACTGGCCTCGTCCCCGAAAGAACTCTCGAACAGATGCGCTCC CGCACATACTCACATCACACATCCAGCTCCGACATCGAAAAAGCCAAAGAGCCAGCAGAATTCGTGACCTTCACC ATCAATGATCCCGAGAACCCCTTCAACTGGTCCCGCACGTACCGCTGGTACGTCACAATGATCGCCTCCCTTCTC GTCGTCTGCATTGCCTACGGCTCCTCCATCGTCACCGGCGGCCTCGGCCTCATCGAAGAGAAATATCACGTTTCT CTCGAAGTCGCGACCCTCACCTGCTCCATCATGGTCTGCGGCTTCGCAGTCGGCCCTCTCCTCTGGTCGCCTCTC TCCGAGATCATCGGCCGCCGTCCCGTCTACATCATCTCCCTTGCCCTCTACACCATCTTCAACATCCCCTGCGCC CTCTCTCCCAACATCGGCGGCCTCCTCGTCTGCCGCTTCCTCTGCGGCGTCTTCTCCAGCTCCGGCCTCTCTCTC GCCGGCGGCACCATCGCCGACATTTGGAACCTCGAAGACCGCGGCATGGCCATCGCCTTCTTCGCCGCAGCCCCC TACTGCGGGCCCGTCATCGGCCCCATAGTCTGCGGCTGGATCACCGTCGGCTCCCACCGTCTCGATCTCTTCTTC TGGACTAACATGGCCTTCTGCGGCGCCGTAATGATCCTCGTCGGTCTCATCCCAGAGACCTACGCCCCCGTGATC TTGAAACGCCGCGCCGCCCGTCTCCGCAAAGAGACCGGAAACCCCAACATCATCACCGAGCAGGAGAAACACAAA CTCACTCTGCACGATATCATCCGCACCAGTCTCATCCGCCCTATCACCATGATCCTCACCGAACCCGTCCTCGAC CTCATGTGCATGTACATCGTGCTCATCTACAGCATGCTCTACGCCTTCTTCTTCGCCTACCCGGTCATCTTCGGA AAACTGTACAACTACAACGACGGCCAGATCGGTCTGATGTTCATCCCTATTCTCATCGGCGCGGGCTTCTCCCTC CTCTTTACTCCACTCGTCGAGAAGCACTTCCACCGGATATGTCTCTCCCGTTCGCCTACCCCGGAAGATAGACTC ATTGGTGCGCTGATTGGCGCGCCGTTCGTGCCTATCTCCCTGTTTATTTTGGGTGCTACGTCCTATAAACATATC ATCTGGGTTGGGCCGGCCTCGTCGGGAATTGCGTTTGGGTTTGGCATGGTGCTGTGTTATTATGCGGTCAATAAC TACATCATTGATAGTTATCAGAAGTATGCGGCCTCGGCGCTGGCTGCGAAGGTTTTCTTGAGATCCGGGGGAGGA GCGGCGTTCCCGCTGTTCATTACCCAGATGTATGACCGGTTGGGGTTGCAGTGGGCGTCGTGGTTGTTGGCATTT ATTGGGGTGGGGATGGTGTTCATTCCGTATGTGTTTTACTTGTTTGGCGCGAGGCTGAGGGGGAAGTTGGGAAGG AAGGAGTAG |
| Gene | >Ani_SJS100_1|g10186.t1 ATGTCATCAACACCAGACCCGGCCAACGGCCAGTCCCATCGTGCCCTATACAGGACAGAAACAAGACAATCCCTC GAGAACCGCGGGATATCAGAAAAAGCACCTCCAACAGACTACAACTACCCCGATGTCGGACGAGAAGAAAACCCC GTCTTCCCAGAGGAATACACCGTTGAGACCAACACTGGCCTCGTCCCCGAAAGAACTCTCGAACAGATGCGCTCC CGCACATACTCACATCACACATCCAGCTCCGACATCGAAAAAGCCAAAGAGCCAGCAGAATTCGTGACCTTCACC ATCAATGATCCCGAGAACCCCTTCAACTGGTCCCGCACGTACCGCTGGTACGTCACAATGATCGCCTCCCTTCTC GTCGTCTGCATTGCCTACGGCTCCTCCATCGTCACCGGCGGCCTCGGCCTCATCGAAGAGAAATATCACGTTTCT CTCGAAGTCGCGACCCTCACCTGCTCCATCATGGTCTGCGGCTTCGCAGTCGGCCCTCTCCTCTGGTCGCCTCTC TCCGAGATCATCGGCCGCCGTCCCGTCTACATCATCTCCCTTGCCCTCTACACCATCTTCAACATCCCCTGCGCC CTCTCTCCCAACATCGGCGGCCTCCTCGTCTGCCGCTTCCTCTGCGGCGTCTTCTCCAGCTCCGGCCTCTCTCTC GCCGGCGGCACCATCGCCGACATTTGGAACCTCGAAGACCGCGGCATGGCCATCGCCTTCTTCGCCGCAGCCCCC TACTGCGGGCCCGTCATCGGCCCCATAGTCTGCGGCTGGATCACCGTCGGCTCCCACCGTCTCGATCTCTTCTTC TGGACTAACATGGCCTTCTGCGGCGCCGTAATGATCCTCGTCGGTCTCATCCCAGAGACCTACGCCCCCGTGATC TTGAAACGCCGCGCCGCCCGTCTCCGCAAAGAGACCGGAAACCCCAACATCATCACCGAGCAGGAGAAACACAAA CTCACTCTGCACGATATCATCCGCACCAGTCTCATCCGCCCTATCACCATGATCCTCACCGAACCCGTCCTCGAC CTCATGTGCATGTACATCGTGCTCATCTACAGCATGCTCTACGCCTTCTTCTTCGCCTACCCGGTCATCTTCGGA AAACTGTACAACTACAACGACGGCCAGATCGGTCTGATGTTCATCCCTATTCTCATCGGCGCGGGCTTCTCCCTC CTCTTTACTCCACTCGTCGAGAAGCACTTCCACCGGATATGTCTCTCCCGTTCGCCTACCCCGGAAGATAGACTC ATTGGTGCGCTGATTGGCGCGCCGTTCGTGCCTATCTCCCTGTTTATTTTGGGTGCTACGTCCTATAAACATATC ATCTGGGTTGGGCCGGCCTCGTCGGGAATTGCGTTTGGGTTTGGCATGGTGCTGTGTTATTATGCGGTCAATAAC TACATCATTGATAGTTATCAGAAGTATGCGGCCTCGGCGCTGGCTGCGAAGGTTTTCTTGAGATCCGGGGGAGGA GCGGCGTTCCCGCTGTTCATTACCCAGATGTATGACCGGTTGGGGTTGCAGTGGGCGTCGTGGTTGTTGGCATTT ATTGGGGTGGGGATGGTGTTCATTCCGTATGTGTTTTACTTGTTTGGCGCGAGGCTGAGGGGGAAGTTGGGAAGG AAGGAGTAG |