Protein ID | Ani_SJS100_1|g1018.t1 |
Gene name | |
Location | scaffold_003:607448..608908 |
Strand | - |
Gene length (bp) | 1460 |
Transcript length (bp) | 1395 |
Coding sequence length (bp) | 1395 |
Protein length (aa) | 465 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF07993 | NAD_binding_4 | Male sterility protein | 5.0E-36 | 12 | 296 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 18 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 426 | 448 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g1018.t1 MLDYYQGKTIFITGGSGFLGTALVHRIATSVEFKHIYLLQRGGQTGLSAKWHQCLRFNTAQWLLEHPQITILDGD MMKPSLGLDNDETEMLKQNVNIIIHAASSINLAQRLQKLWPSVIRATEYAVELGLQCGKLERFVYVSTAYSNTHL CSLFPNRDVEVEERIIPLEQMPPNNGNSTVAEEYSELQSRGSTKEYESNDFPWGYGYAKHLSERLVTDKFTRHGK YDRLLIVRPSVIGPAESMPYPGYAVPTSAPMTMVAAVFVNHPAFSLELSSRLDNPESDSNLDEVPVDVVVDRLLA HLAYQTQGCVHAVSGRKARLSFKEVEAAVYQVRWLPWHFRVKWLKNDGWNTKSDAISRLYKLFGTSFDFHEEKTE QLVSKLSGEERRTLQLFNTRKVGAWELMSRSKQMYDCSTIFATKIAYPYRALYRLLWLIWWVYVKLIVAWAAFDL QTVRRQLFADRKAL* |
Coding | >Ani_SJS100_1|g1018.t1 ATGCTTGACTATTATCAAGGAAAGACTATATTCATCACCGGAGGTTCGGGCTTCCTAGGCACGGCCCTGGTACAT CGAATCGCTACGAGCGTTGAGTTCAAGCACATATACTTGCTACAACGTGGAGGGCAAACTGGTCTGTCCGCAAAA TGGCACCAATGCCTCCGCTTTAATACTGCGCAATGGCTTCTGGAGCACCCACAAATCACTATCCTAGATGGTGAC ATGATGAAGCCGAGTCTAGGCCTTGACAATGACGAGACCGAGATGTTGAAGCAGAACGTCAATATCATCATCCAT GCCGCATCTTCAATCAATCTTGCCCAGCGGCTTCAAAAGCTGTGGCCTAGCGTTATCCGGGCCACAGAGTATGCG GTTGAACTGGGACTCCAATGTGGCAAGCTGGAACGTTTTGTCTACGTCTCAACAGCATATAGCAATACCCACTTG TGCAGCCTGTTTCCCAATCGAGACGTTGAAGTGGAAGAACGCATAATACCACTTGAACAGATGCCTCCTAACAAT GGTAATTCCACTGTTGCCGAGGAGTACTCGGAACTGCAGTCGCGAGGATCCACCAAAGAATACGAAAGCAACGAC TTTCCTTGGGGTTATGGGTATGCCAAACATCTTTCCGAGCGCCTAGTTACGGACAAGTTCACGAGACACGGCAAG TACGACCGATTGCTGATTGTACGGCCCTCTGTAATTGGGCCTGCGGAAAGCATGCCATACCCCGGATATGCGGTT CCCACGTCGGCCCCTATGACTATGGTTGCGGCCGTGTTTGTCAATCATCCAGCATTTTCCTTAGAGTTGTCCAGC CGTCTGGACAACCCAGAATCAGATTCCAATTTGGATGAAGTACCTGTCGACGTCGTTGTAGACCGCCTTCTCGCT CATCTGGCTTACCAAACTCAGGGCTGCGTCCATGCGGTGAGTGGCAGGAAAGCCCGATTGTCCTTCAAAGAAGTG GAAGCGGCAGTTTACCAGGTCCGATGGCTACCCTGGCACTTTCGTGTCAAGTGGCTGAAGAATGACGGGTGGAAT ACGAAATCAGACGCGATCAGTCGTCTGTACAAGCTCTTTGGGACTTCGTTCGACTTCCATGAAGAGAAGACTGAG CAACTGGTTTCAAAATTAAGCGGTGAAGAAAGGAGGACATTGCAGTTGTTCAATACCAGGAAAGTCGGTGCATGG GAGCTGATGTCCCGCAGCAAGCAGATGTATGATTGCTCGACTATATTCGCCACGAAGATAGCTTATCCATACCGG GCTTTGTACCGACTTCTATGGCTTATCTGGTGGGTTTATGTTAAGCTAATTGTTGCTTGGGCGGCATTTGATCTG CAAACTGTGCGTCGGCAGCTGTTCGCTGACCGGAAGGCCCTTTGA |
Transcript | >Ani_SJS100_1|g1018.t1 ATGCTTGACTATTATCAAGGAAAGACTATATTCATCACCGGAGGTTCGGGCTTCCTAGGCACGGCCCTGGTACAT CGAATCGCTACGAGCGTTGAGTTCAAGCACATATACTTGCTACAACGTGGAGGGCAAACTGGTCTGTCCGCAAAA TGGCACCAATGCCTCCGCTTTAATACTGCGCAATGGCTTCTGGAGCACCCACAAATCACTATCCTAGATGGTGAC ATGATGAAGCCGAGTCTAGGCCTTGACAATGACGAGACCGAGATGTTGAAGCAGAACGTCAATATCATCATCCAT GCCGCATCTTCAATCAATCTTGCCCAGCGGCTTCAAAAGCTGTGGCCTAGCGTTATCCGGGCCACAGAGTATGCG GTTGAACTGGGACTCCAATGTGGCAAGCTGGAACGTTTTGTCTACGTCTCAACAGCATATAGCAATACCCACTTG TGCAGCCTGTTTCCCAATCGAGACGTTGAAGTGGAAGAACGCATAATACCACTTGAACAGATGCCTCCTAACAAT GGTAATTCCACTGTTGCCGAGGAGTACTCGGAACTGCAGTCGCGAGGATCCACCAAAGAATACGAAAGCAACGAC TTTCCTTGGGGTTATGGGTATGCCAAACATCTTTCCGAGCGCCTAGTTACGGACAAGTTCACGAGACACGGCAAG TACGACCGATTGCTGATTGTACGGCCCTCTGTAATTGGGCCTGCGGAAAGCATGCCATACCCCGGATATGCGGTT CCCACGTCGGCCCCTATGACTATGGTTGCGGCCGTGTTTGTCAATCATCCAGCATTTTCCTTAGAGTTGTCCAGC CGTCTGGACAACCCAGAATCAGATTCCAATTTGGATGAAGTACCTGTCGACGTCGTTGTAGACCGCCTTCTCGCT CATCTGGCTTACCAAACTCAGGGCTGCGTCCATGCGGTGAGTGGCAGGAAAGCCCGATTGTCCTTCAAAGAAGTG GAAGCGGCAGTTTACCAGGTCCGATGGCTACCCTGGCACTTTCGTGTCAAGTGGCTGAAGAATGACGGGTGGAAT ACGAAATCAGACGCGATCAGTCGTCTGTACAAGCTCTTTGGGACTTCGTTCGACTTCCATGAAGAGAAGACTGAG CAACTGGTTTCAAAATTAAGCGGTGAAGAAAGGAGGACATTGCAGTTGTTCAATACCAGGAAAGTCGGTGCATGG GAGCTGATGTCCCGCAGCAAGCAGATGTATGATTGCTCGACTATATTCGCCACGAAGATAGCTTATCCATACCGG GCTTTGTACCGACTTCTATGGCTTATCTGGTGGGTTTATGTTAAGCTAATTGTTGCTTGGGCGGCATTTGATCTG CAAACTGTGCGTCGGCAGCTGTTCGCTGACCGGAAGGCCCTTTGA |
Gene | >Ani_SJS100_1|g1018.t1 ATGCTTGACTATTATCAAGGAAAGACTATATTCATCACCGGAGGTTCGGGCTTCCTAGGCACGGCCCTGGTACAT CGAATCGCTACGAGCGTTGAGTTCAAGCACATATACTTGCTACAACGTGGAGGGCAAACGTAAGTTGCATGATAC CAGATAATAATGAAGACCACGGAAAACTTACATGCACTTCCCATAACAGTGGTCTGTCCGCAAAATGGCACCAAT GCCTCCGCTTTAATACTGCGCAATGGCTTCTGGAGCACCCACAAATCACTATCCTAGATGGTGACATGATGAAGC CGAGTCTAGGCCTTGACAATGACGAGACCGAGATGTTGAAGCAGAACGTCAATATCATCATCCATGCCGCATCTT CAATCAATCTTGCCCAGCGGCTTCAAAAGCTGTGGCCTAGCGTTATCCGGGCCACAGAGTATGCGGTTGAACTGG GACTCCAATGTGGCAAGCTGGAACGTTTTGTCTACGTCTCAACAGCATATAGCAATACCCACTTGTGCAGCCTGT TTCCCAATCGAGACGTTGAAGTGGAAGAACGCATAATACCACTTGAACAGATGCCTCCTAACAATGGTAATTCCA CTGTTGCCGAGGAGTACTCGGAACTGCAGTCGCGAGGATCCACCAAAGAATACGAAAGCAACGACTTTCCTTGGG GTTATGGGTATGCCAAACATCTTTCCGAGCGCCTAGTTACGGACAAGTTCACGAGACACGGCAAGTACGACCGAT TGCTGATTGTACGGCCCTCTGTAATTGGGCCTGCGGAAAGCATGCCATACCCCGGATATGCGGTTCCCACGTCGG CCCCTATGACTATGGTTGCGGCCGTGTTTGTCAATCATCCAGCATTTTCCTTAGAGTTGTCCAGCCGTCTGGACA ACCCAGAATCAGATTCCAATTTGGATGAAGTACCTGTCGACGTCGTTGTAGACCGCCTTCTCGCTCATCTGGCTT ACCAAACTCAGGGCTGCGTCCATGCGGTGAGTGGCAGGAAAGCCCGATTGTCCTTCAAAGAAGTGGAAGCGGCAG TTTACCAGGTCCGATGGCTACCCTGGCACTTTCGTGTCAAGTGGCTGAAGAATGACGGGTGGAATACGAAATCAG ACGCGATCAGTCGTCTGTACAAGCTCTTTGGGACTTCGTTCGACTTCCATGAAGAGAAGACTGAGCAACTGGTTT CAAAATTAAGCGGTGAAGAAAGGAGGACATTGCAGTTGTTCAATACCAGGAAAGTCGGTGCATGGGAGCTGATGT CCCGCAGCAAGCAGATGTATGATTGCTCGACTATATTCGCCACGAAGATAGCTTATCCATACCGGGCTTTGTACC GACTTCTATGGCTTATCTGGTGGGTTTATGTTAAGCTAATTGTTGCTTGGGCGGCATTTGATCTGCAAACTGTGC GTCGGCAGCTGTTCGCTGACCGGAAGGCCCTTTGA |