Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g1018.t1
Gene name
Locationscaffold_003:607448..608908
Strand-
Gene length (bp)1460
Transcript length (bp)1395
Coding sequence length (bp)1395
Protein length (aa) 465

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07993 NAD_binding_4 Male sterility protein 5.0E-36 12 296

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 18 0.45

Transmembrane Domains

Domain # Start End Length
1 426 448 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g1018.t1
MLDYYQGKTIFITGGSGFLGTALVHRIATSVEFKHIYLLQRGGQTGLSAKWHQCLRFNTAQWLLEHPQITILDGD
MMKPSLGLDNDETEMLKQNVNIIIHAASSINLAQRLQKLWPSVIRATEYAVELGLQCGKLERFVYVSTAYSNTHL
CSLFPNRDVEVEERIIPLEQMPPNNGNSTVAEEYSELQSRGSTKEYESNDFPWGYGYAKHLSERLVTDKFTRHGK
YDRLLIVRPSVIGPAESMPYPGYAVPTSAPMTMVAAVFVNHPAFSLELSSRLDNPESDSNLDEVPVDVVVDRLLA
HLAYQTQGCVHAVSGRKARLSFKEVEAAVYQVRWLPWHFRVKWLKNDGWNTKSDAISRLYKLFGTSFDFHEEKTE
QLVSKLSGEERRTLQLFNTRKVGAWELMSRSKQMYDCSTIFATKIAYPYRALYRLLWLIWWVYVKLIVAWAAFDL
QTVRRQLFADRKAL*
Coding >Ani_SJS100_1|g1018.t1
ATGCTTGACTATTATCAAGGAAAGACTATATTCATCACCGGAGGTTCGGGCTTCCTAGGCACGGCCCTGGTACAT
CGAATCGCTACGAGCGTTGAGTTCAAGCACATATACTTGCTACAACGTGGAGGGCAAACTGGTCTGTCCGCAAAA
TGGCACCAATGCCTCCGCTTTAATACTGCGCAATGGCTTCTGGAGCACCCACAAATCACTATCCTAGATGGTGAC
ATGATGAAGCCGAGTCTAGGCCTTGACAATGACGAGACCGAGATGTTGAAGCAGAACGTCAATATCATCATCCAT
GCCGCATCTTCAATCAATCTTGCCCAGCGGCTTCAAAAGCTGTGGCCTAGCGTTATCCGGGCCACAGAGTATGCG
GTTGAACTGGGACTCCAATGTGGCAAGCTGGAACGTTTTGTCTACGTCTCAACAGCATATAGCAATACCCACTTG
TGCAGCCTGTTTCCCAATCGAGACGTTGAAGTGGAAGAACGCATAATACCACTTGAACAGATGCCTCCTAACAAT
GGTAATTCCACTGTTGCCGAGGAGTACTCGGAACTGCAGTCGCGAGGATCCACCAAAGAATACGAAAGCAACGAC
TTTCCTTGGGGTTATGGGTATGCCAAACATCTTTCCGAGCGCCTAGTTACGGACAAGTTCACGAGACACGGCAAG
TACGACCGATTGCTGATTGTACGGCCCTCTGTAATTGGGCCTGCGGAAAGCATGCCATACCCCGGATATGCGGTT
CCCACGTCGGCCCCTATGACTATGGTTGCGGCCGTGTTTGTCAATCATCCAGCATTTTCCTTAGAGTTGTCCAGC
CGTCTGGACAACCCAGAATCAGATTCCAATTTGGATGAAGTACCTGTCGACGTCGTTGTAGACCGCCTTCTCGCT
CATCTGGCTTACCAAACTCAGGGCTGCGTCCATGCGGTGAGTGGCAGGAAAGCCCGATTGTCCTTCAAAGAAGTG
GAAGCGGCAGTTTACCAGGTCCGATGGCTACCCTGGCACTTTCGTGTCAAGTGGCTGAAGAATGACGGGTGGAAT
ACGAAATCAGACGCGATCAGTCGTCTGTACAAGCTCTTTGGGACTTCGTTCGACTTCCATGAAGAGAAGACTGAG
CAACTGGTTTCAAAATTAAGCGGTGAAGAAAGGAGGACATTGCAGTTGTTCAATACCAGGAAAGTCGGTGCATGG
GAGCTGATGTCCCGCAGCAAGCAGATGTATGATTGCTCGACTATATTCGCCACGAAGATAGCTTATCCATACCGG
GCTTTGTACCGACTTCTATGGCTTATCTGGTGGGTTTATGTTAAGCTAATTGTTGCTTGGGCGGCATTTGATCTG
CAAACTGTGCGTCGGCAGCTGTTCGCTGACCGGAAGGCCCTTTGA
Transcript >Ani_SJS100_1|g1018.t1
ATGCTTGACTATTATCAAGGAAAGACTATATTCATCACCGGAGGTTCGGGCTTCCTAGGCACGGCCCTGGTACAT
CGAATCGCTACGAGCGTTGAGTTCAAGCACATATACTTGCTACAACGTGGAGGGCAAACTGGTCTGTCCGCAAAA
TGGCACCAATGCCTCCGCTTTAATACTGCGCAATGGCTTCTGGAGCACCCACAAATCACTATCCTAGATGGTGAC
ATGATGAAGCCGAGTCTAGGCCTTGACAATGACGAGACCGAGATGTTGAAGCAGAACGTCAATATCATCATCCAT
GCCGCATCTTCAATCAATCTTGCCCAGCGGCTTCAAAAGCTGTGGCCTAGCGTTATCCGGGCCACAGAGTATGCG
GTTGAACTGGGACTCCAATGTGGCAAGCTGGAACGTTTTGTCTACGTCTCAACAGCATATAGCAATACCCACTTG
TGCAGCCTGTTTCCCAATCGAGACGTTGAAGTGGAAGAACGCATAATACCACTTGAACAGATGCCTCCTAACAAT
GGTAATTCCACTGTTGCCGAGGAGTACTCGGAACTGCAGTCGCGAGGATCCACCAAAGAATACGAAAGCAACGAC
TTTCCTTGGGGTTATGGGTATGCCAAACATCTTTCCGAGCGCCTAGTTACGGACAAGTTCACGAGACACGGCAAG
TACGACCGATTGCTGATTGTACGGCCCTCTGTAATTGGGCCTGCGGAAAGCATGCCATACCCCGGATATGCGGTT
CCCACGTCGGCCCCTATGACTATGGTTGCGGCCGTGTTTGTCAATCATCCAGCATTTTCCTTAGAGTTGTCCAGC
CGTCTGGACAACCCAGAATCAGATTCCAATTTGGATGAAGTACCTGTCGACGTCGTTGTAGACCGCCTTCTCGCT
CATCTGGCTTACCAAACTCAGGGCTGCGTCCATGCGGTGAGTGGCAGGAAAGCCCGATTGTCCTTCAAAGAAGTG
GAAGCGGCAGTTTACCAGGTCCGATGGCTACCCTGGCACTTTCGTGTCAAGTGGCTGAAGAATGACGGGTGGAAT
ACGAAATCAGACGCGATCAGTCGTCTGTACAAGCTCTTTGGGACTTCGTTCGACTTCCATGAAGAGAAGACTGAG
CAACTGGTTTCAAAATTAAGCGGTGAAGAAAGGAGGACATTGCAGTTGTTCAATACCAGGAAAGTCGGTGCATGG
GAGCTGATGTCCCGCAGCAAGCAGATGTATGATTGCTCGACTATATTCGCCACGAAGATAGCTTATCCATACCGG
GCTTTGTACCGACTTCTATGGCTTATCTGGTGGGTTTATGTTAAGCTAATTGTTGCTTGGGCGGCATTTGATCTG
CAAACTGTGCGTCGGCAGCTGTTCGCTGACCGGAAGGCCCTTTGA
Gene >Ani_SJS100_1|g1018.t1
ATGCTTGACTATTATCAAGGAAAGACTATATTCATCACCGGAGGTTCGGGCTTCCTAGGCACGGCCCTGGTACAT
CGAATCGCTACGAGCGTTGAGTTCAAGCACATATACTTGCTACAACGTGGAGGGCAAACGTAAGTTGCATGATAC
CAGATAATAATGAAGACCACGGAAAACTTACATGCACTTCCCATAACAGTGGTCTGTCCGCAAAATGGCACCAAT
GCCTCCGCTTTAATACTGCGCAATGGCTTCTGGAGCACCCACAAATCACTATCCTAGATGGTGACATGATGAAGC
CGAGTCTAGGCCTTGACAATGACGAGACCGAGATGTTGAAGCAGAACGTCAATATCATCATCCATGCCGCATCTT
CAATCAATCTTGCCCAGCGGCTTCAAAAGCTGTGGCCTAGCGTTATCCGGGCCACAGAGTATGCGGTTGAACTGG
GACTCCAATGTGGCAAGCTGGAACGTTTTGTCTACGTCTCAACAGCATATAGCAATACCCACTTGTGCAGCCTGT
TTCCCAATCGAGACGTTGAAGTGGAAGAACGCATAATACCACTTGAACAGATGCCTCCTAACAATGGTAATTCCA
CTGTTGCCGAGGAGTACTCGGAACTGCAGTCGCGAGGATCCACCAAAGAATACGAAAGCAACGACTTTCCTTGGG
GTTATGGGTATGCCAAACATCTTTCCGAGCGCCTAGTTACGGACAAGTTCACGAGACACGGCAAGTACGACCGAT
TGCTGATTGTACGGCCCTCTGTAATTGGGCCTGCGGAAAGCATGCCATACCCCGGATATGCGGTTCCCACGTCGG
CCCCTATGACTATGGTTGCGGCCGTGTTTGTCAATCATCCAGCATTTTCCTTAGAGTTGTCCAGCCGTCTGGACA
ACCCAGAATCAGATTCCAATTTGGATGAAGTACCTGTCGACGTCGTTGTAGACCGCCTTCTCGCTCATCTGGCTT
ACCAAACTCAGGGCTGCGTCCATGCGGTGAGTGGCAGGAAAGCCCGATTGTCCTTCAAAGAAGTGGAAGCGGCAG
TTTACCAGGTCCGATGGCTACCCTGGCACTTTCGTGTCAAGTGGCTGAAGAATGACGGGTGGAATACGAAATCAG
ACGCGATCAGTCGTCTGTACAAGCTCTTTGGGACTTCGTTCGACTTCCATGAAGAGAAGACTGAGCAACTGGTTT
CAAAATTAAGCGGTGAAGAAAGGAGGACATTGCAGTTGTTCAATACCAGGAAAGTCGGTGCATGGGAGCTGATGT
CCCGCAGCAAGCAGATGTATGATTGCTCGACTATATTCGCCACGAAGATAGCTTATCCATACCGGGCTTTGTACC
GACTTCTATGGCTTATCTGGTGGGTTTATGTTAAGCTAATTGTTGCTTGGGCGGCATTTGATCTGCAAACTGTGC
GTCGGCAGCTGTTCGCTGACCGGAAGGCCCTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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