© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g10176.t1 |
| Gene name | |
| Location | scaffold_108:3267..6440 |
| Strand | + |
| Gene length (bp) | 3173 |
| Transcript length (bp) | 1791 |
| Coding sequence length (bp) | 1791 |
| Protein length (aa) | 597 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00957 | Synaptobrevin | Synaptobrevin | 4.9E-13 | 133 | 189 |
| PF13774 | Longin | Regulated-SNARE-like domain | 1.4E-10 | 45 | 110 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 235 | 257 | 22 |
| 2 | 264 | 286 | 22 |
| 3 | 318 | 340 | 22 |
| Orthofinder run ID | 3 |
| Orthogroup | 515 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g10176.t1 MKLVYLGILQNAQAPAVELCAERDLSSYSRFTKGSVSEFMTMFSKTVAERTKQGQRQDIQEQDFTFHVYARTQGI AGVIISDNEYPSLAAHQILSKMLDEFLSLNPNAASSRDPVPFPSLKTYIQAYQDPHQVDSILKIQKELDETKIVL HKTIESVLERGEKIDDLVSKSEGLSAQSKMFYTSAKKQNSCCVIISTTNSIIGGRSPTHLSWQCLLEHAPPQPKK ASVFISLEPGVVHSFCWSLIILSTLSLLFTPVQRCFQRYILSIYLVYHSSHVVPLLRLSFVARSGSLLDSMDFDF PVHQSLPFAGHRSRLGDFLTADVMVAAGSAALVTPAVMILDRLVVEKSSHNQPMLPAFRRHLWLSITQPATFLTS RPSLLVWSLYTATFAAANATETILDQVYPHVDHAMAGVATFMSTFVVNSSVGIWKDVKFAQLFGHSNPTTPTPAP KTTTSAAPSQSKILRSVSRTIPFATYSAFLVRDALTIFGSFSLPAMVSASIPDSIASSEYLKILFAQLAIPASIQ LVSTPIHLLGLDLYNRPMQLSASDRLSRVSRDWIGASLTRMCRIIPAFGIGGFANTEGRAFLHQQLRRCED* |
| Coding | >Ani_SJS100_1|g10176.t1 ATGAAGCTCGTTTATCTCGGGATTCTCCAAAATGCTCAAGCTCCCGCCGTGGAGCTCTGCGCCGAGCGCGATCTC AGCAGCTATTCGCGCTTCACCAAGGGCAGCGTCAGCGAATTCATGACGATGTTCAGTAAGACCGTGGCCGAACGG ACGAAACAAGGACAAAGACAGGACATTCAAGAGCAAGATTTCACATTTCACGTCTACGCGCGAACCCAAGGCATC GCCGGAGTGATTATTAGCGATAATGAGTACCCGTCCCTGGCTGCTCACCAGATCCTCTCGAAGATGCTGGATGAG TTCCTCTCCCTGAACCCGAACGCCGCCTCCTCCCGTGACCCGGTGCCCTTCCCCTCCCTCAAGACCTACATTCAG GCGTACCAGGACCCACACCAGGTGGATAGCATCCTCAAGATTCAGAAGGAGCTGGACGAGACCAAGATCGTTTTG CATAAGACTATCGAGAGCGTCCTCGAGCGCGGAGAGAAGATTGACGATCTCGTGTCCAAGTCGGAGGGGCTCAGT GCCCAGTCGAAGATGTTCTACACCTCTGCGAAGAAGCAGAATTCGTGCTGTGTGATCATCAGCACAACGAACAGC ATCATCGGTGGTAGATCGCCAACTCACCTGTCCTGGCAATGCCTTCTAGAACACGCTCCACCTCAACCCAAAAAA GCCTCAGTTTTCATTAGCCTTGAACCCGGGGTTGTCCACTCCTTTTGTTGGTCCCTCATTATACTCTCTACTCTT TCACTCCTTTTTACCCCGGTTCAGCGTTGCTTTCAGCGGTACATCCTCTCCATCTATCTAGTATACCACTCCTCC CACGTCGTTCCCTTGCTTCGACTTTCCTTTGTGGCTAGGAGTGGCTCGCTGCTCGACAGCATGGATTTCGACTTC CCTGTTCATCAGTCCCTGCCCTTTGCGGGGCACCGCAGTCGGCTGGGTGATTTCCTGACGGCGGATGTGATGGTT GCTGCAGGTTCGGCAGCCTTGGTCACTCCTGCCGTCATGATCCTGGACAGACTGGTCGTTGAGAAGTCGTCGCAC AACCAACCTATGCTCCCTGCCTTCCGCCGACACCTCTGGCTCTCCATCACACAGCCTGCCACCTTCCTGACCTCT CGACCCAGTCTGCTCGTCTGGTCGCTTTACACAGCCACCTTTGCGGCCGCCAATGCCACAGAGACCATCCTGGAC CAGGTCTACCCTCACGTCGACCACGCCATGGCAGGGGTGGCCACGTTCATGAGCACCTTTGTGGTCAACTCGTCC GTGGGCATCTGGAAGGACGTCAAATTCGCCCAGCTGTTCGGTCACAGCAACCCCACCACTCCCACTCCTGCTCCC AAGACCACGACCTCTGCTGCTCCGTCCCAAAGCAAGATCCTCCGCTCGGTCAGCCGCACCATCCCCTTTGCCACC TACTCGGCCTTCCTGGTGCGCGATGCCCTCACCATCTTCGGCTCCTTCAGTCTCCCCGCCATGGTCTCGGCCTCC ATCCCGGACTCCATCGCCTCCAGCGAGTACCTCAAGATCCTGTTCGCGCAGCTCGCCATTCCGGCCTCCATTCAG CTGGTCAGTACCCCAATCCACCTGCTCGGCCTTGATCTCTACAATCGGCCCATGCAACTCTCGGCGTCGGACCGA TTGAGTCGGGTGAGCAGGGACTGGATCGGGGCGTCCCTGACGCGTATGTGTCGGATTATTCCCGCGTTCGGGATC GGCGGGTTCGCCAATACCGAAGGCCGGGCATTTCTTCACCAGCAATTGCGGCGATGTGAGGACTGA |
| Transcript | >Ani_SJS100_1|g10176.t1 ATGAAGCTCGTTTATCTCGGGATTCTCCAAAATGCTCAAGCTCCCGCCGTGGAGCTCTGCGCCGAGCGCGATCTC AGCAGCTATTCGCGCTTCACCAAGGGCAGCGTCAGCGAATTCATGACGATGTTCAGTAAGACCGTGGCCGAACGG ACGAAACAAGGACAAAGACAGGACATTCAAGAGCAAGATTTCACATTTCACGTCTACGCGCGAACCCAAGGCATC GCCGGAGTGATTATTAGCGATAATGAGTACCCGTCCCTGGCTGCTCACCAGATCCTCTCGAAGATGCTGGATGAG TTCCTCTCCCTGAACCCGAACGCCGCCTCCTCCCGTGACCCGGTGCCCTTCCCCTCCCTCAAGACCTACATTCAG GCGTACCAGGACCCACACCAGGTGGATAGCATCCTCAAGATTCAGAAGGAGCTGGACGAGACCAAGATCGTTTTG CATAAGACTATCGAGAGCGTCCTCGAGCGCGGAGAGAAGATTGACGATCTCGTGTCCAAGTCGGAGGGGCTCAGT GCCCAGTCGAAGATGTTCTACACCTCTGCGAAGAAGCAGAATTCGTGCTGTGTGATCATCAGCACAACGAACAGC ATCATCGGTGGTAGATCGCCAACTCACCTGTCCTGGCAATGCCTTCTAGAACACGCTCCACCTCAACCCAAAAAA GCCTCAGTTTTCATTAGCCTTGAACCCGGGGTTGTCCACTCCTTTTGTTGGTCCCTCATTATACTCTCTACTCTT TCACTCCTTTTTACCCCGGTTCAGCGTTGCTTTCAGCGGTACATCCTCTCCATCTATCTAGTATACCACTCCTCC CACGTCGTTCCCTTGCTTCGACTTTCCTTTGTGGCTAGGAGTGGCTCGCTGCTCGACAGCATGGATTTCGACTTC CCTGTTCATCAGTCCCTGCCCTTTGCGGGGCACCGCAGTCGGCTGGGTGATTTCCTGACGGCGGATGTGATGGTT GCTGCAGGTTCGGCAGCCTTGGTCACTCCTGCCGTCATGATCCTGGACAGACTGGTCGTTGAGAAGTCGTCGCAC AACCAACCTATGCTCCCTGCCTTCCGCCGACACCTCTGGCTCTCCATCACACAGCCTGCCACCTTCCTGACCTCT CGACCCAGTCTGCTCGTCTGGTCGCTTTACACAGCCACCTTTGCGGCCGCCAATGCCACAGAGACCATCCTGGAC CAGGTCTACCCTCACGTCGACCACGCCATGGCAGGGGTGGCCACGTTCATGAGCACCTTTGTGGTCAACTCGTCC GTGGGCATCTGGAAGGACGTCAAATTCGCCCAGCTGTTCGGTCACAGCAACCCCACCACTCCCACTCCTGCTCCC AAGACCACGACCTCTGCTGCTCCGTCCCAAAGCAAGATCCTCCGCTCGGTCAGCCGCACCATCCCCTTTGCCACC TACTCGGCCTTCCTGGTGCGCGATGCCCTCACCATCTTCGGCTCCTTCAGTCTCCCCGCCATGGTCTCGGCCTCC ATCCCGGACTCCATCGCCTCCAGCGAGTACCTCAAGATCCTGTTCGCGCAGCTCGCCATTCCGGCCTCCATTCAG CTGGTCAGTACCCCAATCCACCTGCTCGGCCTTGATCTCTACAATCGGCCCATGCAACTCTCGGCGTCGGACCGA TTGAGTCGGGTGAGCAGGGACTGGATCGGGGCGTCCCTGACGCGTATGTGTCGGATTATTCCCGCGTTCGGGATC GGCGGGTTCGCCAATACCGAAGGCCGGGCATTTCTTCACCAGCAATTGCGGCGATGTGAGGACTGA |
| Gene | >Ani_SJS100_1|g10176.t1 ATGAAGCTCGTTTATCTCGGGGTAAGGAATGACGGATGTTATCTGTTCATCGTGTCGGCTGTCTGACCCCGTTCA TCTGGACAGATTCTCCAAAATGCTCAAGCTCCCGCCGTGGAGCTCTGCGCCGAGCGCGATCTCAGCAGCTATTCG CGCTTCACCAAGGGCAGCGTCAGCGAATTCATGACGATGTTCAGTAAGACCGTGGCCGAACGGACGAAACAAGGA CAAAGACAGGACATTCAAGAGCAAGGCAAGTTGGCGTCCCTCGGGGTCATCTTTTCACCCCCTCTGCGGCAGCCC CTGACCGCCGGTCGCCTACAGATTTCACATTTCACGTCTACGCGCGAACCCAAGGCATCGCCGGAGTGATTATTA GCGATAATGAGTACCCGTCCCTGGCTGCTCACCAGATCCTCTCGAAGATGCTGGATGAGTTCCTCTCCCTGAACC CGAACGCCGCCTCCTCCCGTGACCCGGTGCCCTTCCCCTCCCTCAAGACCTACATTCAGGCGTACCAGGACCCAC ACCAGGTGGATAGCATCCTCAAGATTCAGAAGGAGCTGGACGAGACCAAGATCGTTTTGCATAAGACTATCGAGA GCGTATGTTCTGCGCGCATTACATGTGGGCAGAATGGTGCTAACTCCCCAACCAGGTCCTCGAGCGCGGAGAGAA GATTGACGATCTCGTGTCCAAGTCGGAGGGGCTCAGTGCCCAGTCGAAGATGTTCTACACCTCTGCGAAGAAGCA GAATTCGTGCTGTGTGATCATGTGAGCAGCGCGCCGATACCTATGCCGGTAACACCCACGTCGAGAATCCTCGAC ACGACCCTCGGAATAGAGGAATTGGTGCGGACATGAAGATCAATCTTTTCTGTGAAATATTTGGAAGCGTTCTGT TGCTACAGGCATTCGTTTATGGTTTTTTTGACCAGGCTGGATTTGCAGGCACATGCGGGACAGGTTTGATTTACG GTAGACGAAGAAATAAGCCCGAGAGCAATGAAGTGGCTTTATGACTTGAGATGATATGGCAGGGCATTAAGAATG AGATATAAGGGGGAAGAACGTAGACCCGAGACTATGTGAATACACAGTTTGGCGTACTGTGGCCTCGTCCCAGCA GTGGATCCGTAGAGGGGCGCATCTGCGATGCTTATCTATGCTCGGGATCCGGCACGTTGATTGGCCCAACCAGGC AGTGCAATGCCTAAGTATAAGTATTAGACTAATTTATTGCAAATCATGGGGAGATATTAGCTCATCCTCAGGCCC TAGTCCGCCAGAGCATCGACTCGTGCACTGTAGGGTCCCTGGACTGGCTGCAGCACCACGCGACCACCCCTAAGC ATTCAATCGGCCCTAACCCAGGTACAACGACTTGCCAGCAAGATGACAGTCCCCGTCGGTCTGTTTCATCCTCTC TCCGGCATGCTGTCGAGAAGTCTACGTGTGCCAGGTACCATCCAGTGAACCCTGCAAATCGGCCGATCATGCGGA GGGCGGCCAACCCGGCCAGGCACGTTAGGGCTTCCCAAGGCCGCACCCTCTCCACTCCAAGCAGCAGCACAACGA ACAGCATCATCGGTGGTAGATCGCCAACTCACCTGTCCTGGCAATGCCTTCTAGAACACGCTCCACCTCAACCCA AAAAAGCCTCAGTTTTCATTAGGTACAGGGAGTGCCGGCTTGGGTAAGGCGGTGCCTATCGCCAAATCACCGAGG GTACCCGGGTCCCGGCCCGGTTGATGCCATTGGCCCTTGCCGCCGAATATCGTCTCCCCCTCGATTCGGCAGCCT GTTTTGTGTGGGAGATTAGTAGGAGTAAGTATTGATTCACGGTGTGTTGGGCAACCTGGTGATGCGGGCGGTCAT GACTCTATCTCGTTTCTTATAAGCCTTGAACCCGGGGTTGTCCACTCCTTTTGTTGGTCCCTCATTATACTCTCT ACTCTTTCACTCCTTTTTACCCCGGTTCAGCGTTGCTTTCAGCGGTACATCCTCTCCATCTATCTAGGTCAGTAG CTCCCCACCATTTTCCCATCTATACTCCCTTTGTATACTAACCACCCCTCAGTATACCACTCCTCCCACGTCGTT CCCTTGCTTCGACTTTCCTTTGTGTCATCTGCCATAGAACTGCTCTGCATCCAACCCCACCACTACATCTGATTC CCCAGTCAGGGCTAGGAGTGGCTCGCTGCTCGACAGCATGGATTTCGACTTCCCTGTTCATCAGTCCCTGCCCTT TGCGGGGCACCGCAGTCGGCTGGGTGATTTCCTGACGGCGGATGTGATGGTTGCTGCAGGTTCGGCAGCCTTGGT CACTCCTGCCGTCATGATCCTGGACAGGTAGGAGCTTCCTCTCTCGTTCACCTACCTGACTGTTGTACTGATCAC CACCTAGACTGGTCGTTGAGAAGTCGTCGCACAACCAACCTATGCTCCCTGCCTTCCGCCGACACCTCTGGCTCT CCATCACACAGCCTGCCACCTTCCTGACCTCTCGACCCAGTCTGCTCGTCTGGTCGCTTTACACAGCCACCTTTG CGGCCGCCAATGCCACAGAGACCATCCTGGACCAGGTCTACCCTCACGTCGACCACGCCATGGCAGGGGTGGCCA CGTTCATGAGCACCTTTGTGGTCAACTCGTCCGTGGGCATCTGGAAGGACGTCAAATTCGCCCAGCTGTTCGGTC ACAGCAACCCCACCACTCCCACTCCTGCTCCCAAGACCACGACCTCTGCTGCTCCGTCCCAAAGCAAGATCCTCC GCTCGGTCAGCCGCACCATCCCCTTTGCCACCTACTCGGCCTTCCTGGTGCGCGATGCCCTCACCATCTTCGGCT CCTTCAGTCTCCCCGCCATGGTCTCGGCCTCCATCCCGGACTCCATCGCCTCCAGCGAGTACCTCAAGATCCTGT TCGCGCAGCTCGCCATTCCGGCCTCCATTCAGCTGGTCAGTACCCCAATCCACCTGCTCGGCCTTGATCTCTACA ATCGGCCCATGCAACTCTCGGCGTCGGACCGATTGAGTCGGGTGAGCAGGGACTGGATCGGGGCGTCCCTGACGC GTATGTGTCGGATTATTCCCGCGTTCGGGATCGGCGGGTTCGCCAATACCGAAGGCCGGGCATTTCTTCACCAGC AATTGCGGCGATGTGAGGACTGA |