Protein ID | Ani_SJS100_1|g10176.t1 |
Gene name | |
Location | scaffold_108:3267..6440 |
Strand | + |
Gene length (bp) | 3173 |
Transcript length (bp) | 1791 |
Coding sequence length (bp) | 1791 |
Protein length (aa) | 597 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00957 | Synaptobrevin | Synaptobrevin | 4.9E-13 | 133 | 189 |
PF13774 | Longin | Regulated-SNARE-like domain | 1.4E-10 | 45 | 110 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 235 | 257 | 22 |
2 | 264 | 286 | 22 |
3 | 318 | 340 | 22 |
Orthofinder run ID | 3 |
Orthogroup | 515 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g10176.t1 MKLVYLGILQNAQAPAVELCAERDLSSYSRFTKGSVSEFMTMFSKTVAERTKQGQRQDIQEQDFTFHVYARTQGI AGVIISDNEYPSLAAHQILSKMLDEFLSLNPNAASSRDPVPFPSLKTYIQAYQDPHQVDSILKIQKELDETKIVL HKTIESVLERGEKIDDLVSKSEGLSAQSKMFYTSAKKQNSCCVIISTTNSIIGGRSPTHLSWQCLLEHAPPQPKK ASVFISLEPGVVHSFCWSLIILSTLSLLFTPVQRCFQRYILSIYLVYHSSHVVPLLRLSFVARSGSLLDSMDFDF PVHQSLPFAGHRSRLGDFLTADVMVAAGSAALVTPAVMILDRLVVEKSSHNQPMLPAFRRHLWLSITQPATFLTS RPSLLVWSLYTATFAAANATETILDQVYPHVDHAMAGVATFMSTFVVNSSVGIWKDVKFAQLFGHSNPTTPTPAP KTTTSAAPSQSKILRSVSRTIPFATYSAFLVRDALTIFGSFSLPAMVSASIPDSIASSEYLKILFAQLAIPASIQ LVSTPIHLLGLDLYNRPMQLSASDRLSRVSRDWIGASLTRMCRIIPAFGIGGFANTEGRAFLHQQLRRCED* |
Coding | >Ani_SJS100_1|g10176.t1 ATGAAGCTCGTTTATCTCGGGATTCTCCAAAATGCTCAAGCTCCCGCCGTGGAGCTCTGCGCCGAGCGCGATCTC AGCAGCTATTCGCGCTTCACCAAGGGCAGCGTCAGCGAATTCATGACGATGTTCAGTAAGACCGTGGCCGAACGG ACGAAACAAGGACAAAGACAGGACATTCAAGAGCAAGATTTCACATTTCACGTCTACGCGCGAACCCAAGGCATC GCCGGAGTGATTATTAGCGATAATGAGTACCCGTCCCTGGCTGCTCACCAGATCCTCTCGAAGATGCTGGATGAG TTCCTCTCCCTGAACCCGAACGCCGCCTCCTCCCGTGACCCGGTGCCCTTCCCCTCCCTCAAGACCTACATTCAG GCGTACCAGGACCCACACCAGGTGGATAGCATCCTCAAGATTCAGAAGGAGCTGGACGAGACCAAGATCGTTTTG CATAAGACTATCGAGAGCGTCCTCGAGCGCGGAGAGAAGATTGACGATCTCGTGTCCAAGTCGGAGGGGCTCAGT GCCCAGTCGAAGATGTTCTACACCTCTGCGAAGAAGCAGAATTCGTGCTGTGTGATCATCAGCACAACGAACAGC ATCATCGGTGGTAGATCGCCAACTCACCTGTCCTGGCAATGCCTTCTAGAACACGCTCCACCTCAACCCAAAAAA GCCTCAGTTTTCATTAGCCTTGAACCCGGGGTTGTCCACTCCTTTTGTTGGTCCCTCATTATACTCTCTACTCTT TCACTCCTTTTTACCCCGGTTCAGCGTTGCTTTCAGCGGTACATCCTCTCCATCTATCTAGTATACCACTCCTCC CACGTCGTTCCCTTGCTTCGACTTTCCTTTGTGGCTAGGAGTGGCTCGCTGCTCGACAGCATGGATTTCGACTTC CCTGTTCATCAGTCCCTGCCCTTTGCGGGGCACCGCAGTCGGCTGGGTGATTTCCTGACGGCGGATGTGATGGTT GCTGCAGGTTCGGCAGCCTTGGTCACTCCTGCCGTCATGATCCTGGACAGACTGGTCGTTGAGAAGTCGTCGCAC AACCAACCTATGCTCCCTGCCTTCCGCCGACACCTCTGGCTCTCCATCACACAGCCTGCCACCTTCCTGACCTCT CGACCCAGTCTGCTCGTCTGGTCGCTTTACACAGCCACCTTTGCGGCCGCCAATGCCACAGAGACCATCCTGGAC CAGGTCTACCCTCACGTCGACCACGCCATGGCAGGGGTGGCCACGTTCATGAGCACCTTTGTGGTCAACTCGTCC GTGGGCATCTGGAAGGACGTCAAATTCGCCCAGCTGTTCGGTCACAGCAACCCCACCACTCCCACTCCTGCTCCC AAGACCACGACCTCTGCTGCTCCGTCCCAAAGCAAGATCCTCCGCTCGGTCAGCCGCACCATCCCCTTTGCCACC TACTCGGCCTTCCTGGTGCGCGATGCCCTCACCATCTTCGGCTCCTTCAGTCTCCCCGCCATGGTCTCGGCCTCC ATCCCGGACTCCATCGCCTCCAGCGAGTACCTCAAGATCCTGTTCGCGCAGCTCGCCATTCCGGCCTCCATTCAG CTGGTCAGTACCCCAATCCACCTGCTCGGCCTTGATCTCTACAATCGGCCCATGCAACTCTCGGCGTCGGACCGA TTGAGTCGGGTGAGCAGGGACTGGATCGGGGCGTCCCTGACGCGTATGTGTCGGATTATTCCCGCGTTCGGGATC GGCGGGTTCGCCAATACCGAAGGCCGGGCATTTCTTCACCAGCAATTGCGGCGATGTGAGGACTGA |
Transcript | >Ani_SJS100_1|g10176.t1 ATGAAGCTCGTTTATCTCGGGATTCTCCAAAATGCTCAAGCTCCCGCCGTGGAGCTCTGCGCCGAGCGCGATCTC AGCAGCTATTCGCGCTTCACCAAGGGCAGCGTCAGCGAATTCATGACGATGTTCAGTAAGACCGTGGCCGAACGG ACGAAACAAGGACAAAGACAGGACATTCAAGAGCAAGATTTCACATTTCACGTCTACGCGCGAACCCAAGGCATC GCCGGAGTGATTATTAGCGATAATGAGTACCCGTCCCTGGCTGCTCACCAGATCCTCTCGAAGATGCTGGATGAG TTCCTCTCCCTGAACCCGAACGCCGCCTCCTCCCGTGACCCGGTGCCCTTCCCCTCCCTCAAGACCTACATTCAG GCGTACCAGGACCCACACCAGGTGGATAGCATCCTCAAGATTCAGAAGGAGCTGGACGAGACCAAGATCGTTTTG CATAAGACTATCGAGAGCGTCCTCGAGCGCGGAGAGAAGATTGACGATCTCGTGTCCAAGTCGGAGGGGCTCAGT GCCCAGTCGAAGATGTTCTACACCTCTGCGAAGAAGCAGAATTCGTGCTGTGTGATCATCAGCACAACGAACAGC ATCATCGGTGGTAGATCGCCAACTCACCTGTCCTGGCAATGCCTTCTAGAACACGCTCCACCTCAACCCAAAAAA GCCTCAGTTTTCATTAGCCTTGAACCCGGGGTTGTCCACTCCTTTTGTTGGTCCCTCATTATACTCTCTACTCTT TCACTCCTTTTTACCCCGGTTCAGCGTTGCTTTCAGCGGTACATCCTCTCCATCTATCTAGTATACCACTCCTCC CACGTCGTTCCCTTGCTTCGACTTTCCTTTGTGGCTAGGAGTGGCTCGCTGCTCGACAGCATGGATTTCGACTTC CCTGTTCATCAGTCCCTGCCCTTTGCGGGGCACCGCAGTCGGCTGGGTGATTTCCTGACGGCGGATGTGATGGTT GCTGCAGGTTCGGCAGCCTTGGTCACTCCTGCCGTCATGATCCTGGACAGACTGGTCGTTGAGAAGTCGTCGCAC AACCAACCTATGCTCCCTGCCTTCCGCCGACACCTCTGGCTCTCCATCACACAGCCTGCCACCTTCCTGACCTCT CGACCCAGTCTGCTCGTCTGGTCGCTTTACACAGCCACCTTTGCGGCCGCCAATGCCACAGAGACCATCCTGGAC CAGGTCTACCCTCACGTCGACCACGCCATGGCAGGGGTGGCCACGTTCATGAGCACCTTTGTGGTCAACTCGTCC GTGGGCATCTGGAAGGACGTCAAATTCGCCCAGCTGTTCGGTCACAGCAACCCCACCACTCCCACTCCTGCTCCC AAGACCACGACCTCTGCTGCTCCGTCCCAAAGCAAGATCCTCCGCTCGGTCAGCCGCACCATCCCCTTTGCCACC TACTCGGCCTTCCTGGTGCGCGATGCCCTCACCATCTTCGGCTCCTTCAGTCTCCCCGCCATGGTCTCGGCCTCC ATCCCGGACTCCATCGCCTCCAGCGAGTACCTCAAGATCCTGTTCGCGCAGCTCGCCATTCCGGCCTCCATTCAG CTGGTCAGTACCCCAATCCACCTGCTCGGCCTTGATCTCTACAATCGGCCCATGCAACTCTCGGCGTCGGACCGA TTGAGTCGGGTGAGCAGGGACTGGATCGGGGCGTCCCTGACGCGTATGTGTCGGATTATTCCCGCGTTCGGGATC GGCGGGTTCGCCAATACCGAAGGCCGGGCATTTCTTCACCAGCAATTGCGGCGATGTGAGGACTGA |
Gene | >Ani_SJS100_1|g10176.t1 ATGAAGCTCGTTTATCTCGGGGTAAGGAATGACGGATGTTATCTGTTCATCGTGTCGGCTGTCTGACCCCGTTCA TCTGGACAGATTCTCCAAAATGCTCAAGCTCCCGCCGTGGAGCTCTGCGCCGAGCGCGATCTCAGCAGCTATTCG CGCTTCACCAAGGGCAGCGTCAGCGAATTCATGACGATGTTCAGTAAGACCGTGGCCGAACGGACGAAACAAGGA CAAAGACAGGACATTCAAGAGCAAGGCAAGTTGGCGTCCCTCGGGGTCATCTTTTCACCCCCTCTGCGGCAGCCC CTGACCGCCGGTCGCCTACAGATTTCACATTTCACGTCTACGCGCGAACCCAAGGCATCGCCGGAGTGATTATTA GCGATAATGAGTACCCGTCCCTGGCTGCTCACCAGATCCTCTCGAAGATGCTGGATGAGTTCCTCTCCCTGAACC CGAACGCCGCCTCCTCCCGTGACCCGGTGCCCTTCCCCTCCCTCAAGACCTACATTCAGGCGTACCAGGACCCAC ACCAGGTGGATAGCATCCTCAAGATTCAGAAGGAGCTGGACGAGACCAAGATCGTTTTGCATAAGACTATCGAGA GCGTATGTTCTGCGCGCATTACATGTGGGCAGAATGGTGCTAACTCCCCAACCAGGTCCTCGAGCGCGGAGAGAA GATTGACGATCTCGTGTCCAAGTCGGAGGGGCTCAGTGCCCAGTCGAAGATGTTCTACACCTCTGCGAAGAAGCA GAATTCGTGCTGTGTGATCATGTGAGCAGCGCGCCGATACCTATGCCGGTAACACCCACGTCGAGAATCCTCGAC ACGACCCTCGGAATAGAGGAATTGGTGCGGACATGAAGATCAATCTTTTCTGTGAAATATTTGGAAGCGTTCTGT TGCTACAGGCATTCGTTTATGGTTTTTTTGACCAGGCTGGATTTGCAGGCACATGCGGGACAGGTTTGATTTACG GTAGACGAAGAAATAAGCCCGAGAGCAATGAAGTGGCTTTATGACTTGAGATGATATGGCAGGGCATTAAGAATG AGATATAAGGGGGAAGAACGTAGACCCGAGACTATGTGAATACACAGTTTGGCGTACTGTGGCCTCGTCCCAGCA GTGGATCCGTAGAGGGGCGCATCTGCGATGCTTATCTATGCTCGGGATCCGGCACGTTGATTGGCCCAACCAGGC AGTGCAATGCCTAAGTATAAGTATTAGACTAATTTATTGCAAATCATGGGGAGATATTAGCTCATCCTCAGGCCC TAGTCCGCCAGAGCATCGACTCGTGCACTGTAGGGTCCCTGGACTGGCTGCAGCACCACGCGACCACCCCTAAGC ATTCAATCGGCCCTAACCCAGGTACAACGACTTGCCAGCAAGATGACAGTCCCCGTCGGTCTGTTTCATCCTCTC TCCGGCATGCTGTCGAGAAGTCTACGTGTGCCAGGTACCATCCAGTGAACCCTGCAAATCGGCCGATCATGCGGA GGGCGGCCAACCCGGCCAGGCACGTTAGGGCTTCCCAAGGCCGCACCCTCTCCACTCCAAGCAGCAGCACAACGA ACAGCATCATCGGTGGTAGATCGCCAACTCACCTGTCCTGGCAATGCCTTCTAGAACACGCTCCACCTCAACCCA AAAAAGCCTCAGTTTTCATTAGGTACAGGGAGTGCCGGCTTGGGTAAGGCGGTGCCTATCGCCAAATCACCGAGG GTACCCGGGTCCCGGCCCGGTTGATGCCATTGGCCCTTGCCGCCGAATATCGTCTCCCCCTCGATTCGGCAGCCT GTTTTGTGTGGGAGATTAGTAGGAGTAAGTATTGATTCACGGTGTGTTGGGCAACCTGGTGATGCGGGCGGTCAT GACTCTATCTCGTTTCTTATAAGCCTTGAACCCGGGGTTGTCCACTCCTTTTGTTGGTCCCTCATTATACTCTCT ACTCTTTCACTCCTTTTTACCCCGGTTCAGCGTTGCTTTCAGCGGTACATCCTCTCCATCTATCTAGGTCAGTAG CTCCCCACCATTTTCCCATCTATACTCCCTTTGTATACTAACCACCCCTCAGTATACCACTCCTCCCACGTCGTT CCCTTGCTTCGACTTTCCTTTGTGTCATCTGCCATAGAACTGCTCTGCATCCAACCCCACCACTACATCTGATTC CCCAGTCAGGGCTAGGAGTGGCTCGCTGCTCGACAGCATGGATTTCGACTTCCCTGTTCATCAGTCCCTGCCCTT TGCGGGGCACCGCAGTCGGCTGGGTGATTTCCTGACGGCGGATGTGATGGTTGCTGCAGGTTCGGCAGCCTTGGT CACTCCTGCCGTCATGATCCTGGACAGGTAGGAGCTTCCTCTCTCGTTCACCTACCTGACTGTTGTACTGATCAC CACCTAGACTGGTCGTTGAGAAGTCGTCGCACAACCAACCTATGCTCCCTGCCTTCCGCCGACACCTCTGGCTCT CCATCACACAGCCTGCCACCTTCCTGACCTCTCGACCCAGTCTGCTCGTCTGGTCGCTTTACACAGCCACCTTTG CGGCCGCCAATGCCACAGAGACCATCCTGGACCAGGTCTACCCTCACGTCGACCACGCCATGGCAGGGGTGGCCA CGTTCATGAGCACCTTTGTGGTCAACTCGTCCGTGGGCATCTGGAAGGACGTCAAATTCGCCCAGCTGTTCGGTC ACAGCAACCCCACCACTCCCACTCCTGCTCCCAAGACCACGACCTCTGCTGCTCCGTCCCAAAGCAAGATCCTCC GCTCGGTCAGCCGCACCATCCCCTTTGCCACCTACTCGGCCTTCCTGGTGCGCGATGCCCTCACCATCTTCGGCT CCTTCAGTCTCCCCGCCATGGTCTCGGCCTCCATCCCGGACTCCATCGCCTCCAGCGAGTACCTCAAGATCCTGT TCGCGCAGCTCGCCATTCCGGCCTCCATTCAGCTGGTCAGTACCCCAATCCACCTGCTCGGCCTTGATCTCTACA ATCGGCCCATGCAACTCTCGGCGTCGGACCGATTGAGTCGGGTGAGCAGGGACTGGATCGGGGCGTCCCTGACGC GTATGTGTCGGATTATTCCCGCGTTCGGGATCGGCGGGTTCGCCAATACCGAAGGCCGGGCATTTCTTCACCAGC AATTGCGGCGATGTGAGGACTGA |