© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g1014.t1 |
| Gene name | |
| Location | scaffold_003:592525..594913 |
| Strand | + |
| Gene length (bp) | 2388 |
| Transcript length (bp) | 2265 |
| Coding sequence length (bp) | 2265 |
| Protein length (aa) | 755 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05970 | PIF1 | PIF1-like helicase | 1.4E-52 | 241 | 445 |
| PF05970 | PIF1 | PIF1-like helicase | 1.8E-14 | 465 | 548 |
| PF13604 | AAA_30 | AAA domain | 8.8E-25 | 241 | 451 |
| PF13245 | AAA_19 | AAA domain | 2.2E-12 | 252 | 392 |
| PF13401 | AAA_22 | AAA domain | 1.4E-06 | 255 | 384 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0000723 | telomere maintenance | Yes |
| GO:0003678 | DNA helicase activity | Yes |
| GO:0006281 | DNA repair | Yes |
| GO:0006974 | cellular response to DNA damage stimulus | No |
| GO:0140640 | catalytic activity, acting on a nucleic acid | No |
| GO:0006950 | response to stress | No |
| GO:0009987 | cellular process | No |
| GO:0140657 | ATP-dependent activity | No |
| GO:0003674 | molecular_function | No |
| GO:0008094 | ATP-dependent activity, acting on DNA | No |
| GO:0071840 | cellular component organization or biogenesis | No |
| GO:0090304 | nucleic acid metabolic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0033554 | cellular response to stress | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0051276 | chromosome organization | No |
| GO:1901360 | organic cyclic compound metabolic process | No |
| GO:0140097 | catalytic activity, acting on DNA | No |
| GO:0008150 | biological_process | No |
| GO:0006996 | organelle organization | No |
| GO:0044260 | cellular macromolecule metabolic process | No |
| GO:0004386 | helicase activity | No |
| GO:0050896 | response to stimulus | No |
| GO:0006139 | nucleobase-containing compound metabolic process | No |
| GO:0032200 | telomere organization | No |
| GO:0003824 | catalytic activity | No |
| GO:0046483 | heterocycle metabolic process | No |
| GO:0008152 | metabolic process | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0006725 | cellular aromatic compound metabolic process | No |
| GO:0051716 | cellular response to stimulus | No |
| GO:0034641 | cellular nitrogen compound metabolic process | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0016043 | cellular component organization | No |
| GO:0006259 | DNA metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 25 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g1014.t1 MFKKAVKEHSVASATPLQSTLTRSNNGSASMRPPPPSTGVKRKIEMATVRESNLGSLHDGVYFDENDFDDDDDLD FEEPDPFIPPAPITRPSVPKSEPPKYPSLHDIAAQEEDIPIVDLTSPSKVAAEVKYPDLPPVPDESVPPSSSIQI PWSSSPPSHFQQPTKKPRTLPWLKDEPEPEPEPPSLKPQTPIRPKRTDPWNQSYSAIKDGQRELRRQNKTMKAQA SGQIHNPRTKVASIFLSDEQRHVLDAVVQQGKSIFFTGSAGTGKSVLMREIIKKLRDKYKKEPDRVAVTASTGLA ACNIEGVTLHSFAGIGLGKEPVPELVKKIKKNQKARNRWMRTKVLIVDEVSMVDGDLFDKLEEIARRIRNNGRPF GGIQLVVTGDFFQLPPVPEGSNREAKFAFAAATWNTSIQHTILLTHIFRQRDPEFADMLNELRLGKISPRTIDTF KQLSRPLDFHDSLEATELFPTRQEVESANGARMSRLSGETMTFNAVDSGTIQDPQFRERLLANCMAPPVIHLKKG AQVMLIKNMEDTLVNGSIGRVVAFMDEATFDYYIDNENEFSGGAGEAGNNSDDEIMARARKKLKPMAANKDGSGP GGITLTRKWPLVCFVQPDGTERHLLCQPETWKIELPNGEVQAQRQQVPLILAWALSIHKAQGQTLQRVKVDLGRV FEKGQAYVALSRATSKAGLQVMRFEARKVMVHPKVTDFYSKLVSISDVMKASKKPKSGGGGGPDPEDDFEQDYLE HLYG* |
| Coding | >Ani_SJS100_1|g1014.t1 ATGTTCAAGAAAGCCGTCAAGGAACATTCAGTAGCGTCAGCGACTCCGCTACAGTCCACGCTTACGCGCAGCAAT AATGGAAGTGCTTCGATGAGACCCCCGCCGCCGTCCACAGGGGTTAAGCGCAAGATTGAGATGGCTACCGTGCGA GAGTCTAATCTGGGGTCCCTCCACGACGGTGTCTACTTCGATGAGAACGACTTCGACGACGATGACGACCTGGAC TTTGAGGAACCCGATCCATTCATTCCCCCTGCCCCCATAACCAGACCGAGCGTCCCGAAATCCGAACCGCCCAAG TACCCGTCCCTCCATGACATAGCTGCGCAAGAGGAAGATATACCGATAGTCGACTTGACTTCGCCGAGCAAGGTG GCAGCGGAGGTTAAATATCCTGATTTACCTCCAGTTCCAGATGAGAGCGTTCCGCCTTCCAGCAGCATACAAATC CCATGGTCTTCTTCGCCCCCCTCCCACTTCCAACAACCGACCAAGAAGCCTCGAACTTTACCATGGCTGAAAGAC GAGCCGGAACCAGAACCAGAACCACCGTCTCTGAAACCGCAAACGCCTATACGGCCGAAACGTACGGATCCCTGG AATCAATCATATAGCGCGATCAAGGATGGGCAAAGGGAACTGCGTCGGCAGAATAAAACTATGAAAGCACAAGCA AGCGGTCAAATACACAACCCTCGCACGAAGGTGGCTTCAATCTTTCTCAGCGATGAGCAACGCCATGTCCTGGAC GCGGTTGTACAGCAAGGGAAGAGTATATTCTTTACAGGATCTGCCGGAACGGGCAAGTCGGTGCTTATGAGGGAA ATCATCAAGAAACTGCGTGATAAGTATAAGAAAGAGCCGGACAGGGTTGCGGTAACAGCATCTACTGGCTTAGCA GCGTGTAATATCGAGGGCGTGACTCTCCACAGTTTCGCAGGTATTGGACTGGGGAAGGAACCTGTTCCGGAGCTT GTCAAGAAGATCAAGAAGAATCAGAAAGCCCGCAATCGTTGGATGCGCACCAAGGTTCTGATCGTCGATGAAGTG TCCATGGTCGACGGCGATCTCTTCGACAAGCTAGAGGAAATCGCGCGTCGCATTAGGAATAATGGTCGTCCTTTC GGAGGTATACAACTAGTAGTCACCGGTGACTTTTTCCAACTCCCTCCCGTCCCAGAGGGCAGCAACCGAGAAGCC AAATTCGCATTCGCAGCTGCGACCTGGAACACCTCCATACAACACACCATCCTCCTAACCCATATTTTCCGTCAA CGAGACCCCGAATTCGCCGACATGCTCAACGAGCTTCGCCTGGGAAAGATCTCACCACGGACCATCGACACATTC AAACAGCTTTCTCGGCCTCTCGACTTCCATGACTCCCTCGAGGCCACCGAACTGTTCCCCACGCGCCAAGAAGTC GAGAGCGCCAACGGCGCCCGAATGAGCCGCCTATCTGGCGAAACAATGACCTTCAACGCCGTCGACAGCGGCACA ATCCAAGACCCCCAATTCCGCGAACGCCTACTAGCCAACTGCATGGCGCCACCAGTGATCCACCTCAAAAAGGGA GCGCAAGTCATGCTCATCAAAAACATGGAAGACACGCTCGTCAACGGCTCCATCGGCCGTGTCGTGGCATTCATG GACGAAGCCACCTTCGACTACTACATCGACAACGAGAACGAATTCTCAGGGGGGGCAGGAGAAGCAGGCAACAAC AGCGACGACGAGATCATGGCTCGCGCACGCAAGAAACTCAAGCCCATGGCCGCCAACAAGGACGGCAGTGGTCCC GGCGGCATAACGCTCACCCGTAAATGGCCCCTCGTATGCTTCGTGCAGCCTGACGGAACCGAACGCCATCTCCTC TGCCAGCCGGAGACGTGGAAGATCGAGCTTCCAAACGGAGAGGTGCAGGCGCAGCGCCAACAGGTGCCGCTTATT CTGGCTTGGGCTTTGTCCATCCATAAGGCGCAGGGGCAGACGCTGCAGCGGGTAAAGGTTGATTTGGGCCGCGTG TTTGAGAAGGGTCAGGCCTATGTTGCGCTGAGTCGTGCGACCTCGAAAGCTGGTCTTCAGGTCATGCGGTTCGAG GCGCGCAAGGTCATGGTTCATCCGAAGGTTACCGATTTTTATTCTAAGCTTGTTAGTATTAGTGATGTGATGAAG GCTTCGAAGAAGCCGAAGTCGGGTGGTGGTGGTGGCCCGGATCCTGAGGATGATTTCGAGCAGGATTATTTAGAG CATTTATATGGGTGA |
| Transcript | >Ani_SJS100_1|g1014.t1 ATGTTCAAGAAAGCCGTCAAGGAACATTCAGTAGCGTCAGCGACTCCGCTACAGTCCACGCTTACGCGCAGCAAT AATGGAAGTGCTTCGATGAGACCCCCGCCGCCGTCCACAGGGGTTAAGCGCAAGATTGAGATGGCTACCGTGCGA GAGTCTAATCTGGGGTCCCTCCACGACGGTGTCTACTTCGATGAGAACGACTTCGACGACGATGACGACCTGGAC TTTGAGGAACCCGATCCATTCATTCCCCCTGCCCCCATAACCAGACCGAGCGTCCCGAAATCCGAACCGCCCAAG TACCCGTCCCTCCATGACATAGCTGCGCAAGAGGAAGATATACCGATAGTCGACTTGACTTCGCCGAGCAAGGTG GCAGCGGAGGTTAAATATCCTGATTTACCTCCAGTTCCAGATGAGAGCGTTCCGCCTTCCAGCAGCATACAAATC CCATGGTCTTCTTCGCCCCCCTCCCACTTCCAACAACCGACCAAGAAGCCTCGAACTTTACCATGGCTGAAAGAC GAGCCGGAACCAGAACCAGAACCACCGTCTCTGAAACCGCAAACGCCTATACGGCCGAAACGTACGGATCCCTGG AATCAATCATATAGCGCGATCAAGGATGGGCAAAGGGAACTGCGTCGGCAGAATAAAACTATGAAAGCACAAGCA AGCGGTCAAATACACAACCCTCGCACGAAGGTGGCTTCAATCTTTCTCAGCGATGAGCAACGCCATGTCCTGGAC GCGGTTGTACAGCAAGGGAAGAGTATATTCTTTACAGGATCTGCCGGAACGGGCAAGTCGGTGCTTATGAGGGAA ATCATCAAGAAACTGCGTGATAAGTATAAGAAAGAGCCGGACAGGGTTGCGGTAACAGCATCTACTGGCTTAGCA GCGTGTAATATCGAGGGCGTGACTCTCCACAGTTTCGCAGGTATTGGACTGGGGAAGGAACCTGTTCCGGAGCTT GTCAAGAAGATCAAGAAGAATCAGAAAGCCCGCAATCGTTGGATGCGCACCAAGGTTCTGATCGTCGATGAAGTG TCCATGGTCGACGGCGATCTCTTCGACAAGCTAGAGGAAATCGCGCGTCGCATTAGGAATAATGGTCGTCCTTTC GGAGGTATACAACTAGTAGTCACCGGTGACTTTTTCCAACTCCCTCCCGTCCCAGAGGGCAGCAACCGAGAAGCC AAATTCGCATTCGCAGCTGCGACCTGGAACACCTCCATACAACACACCATCCTCCTAACCCATATTTTCCGTCAA CGAGACCCCGAATTCGCCGACATGCTCAACGAGCTTCGCCTGGGAAAGATCTCACCACGGACCATCGACACATTC AAACAGCTTTCTCGGCCTCTCGACTTCCATGACTCCCTCGAGGCCACCGAACTGTTCCCCACGCGCCAAGAAGTC GAGAGCGCCAACGGCGCCCGAATGAGCCGCCTATCTGGCGAAACAATGACCTTCAACGCCGTCGACAGCGGCACA ATCCAAGACCCCCAATTCCGCGAACGCCTACTAGCCAACTGCATGGCGCCACCAGTGATCCACCTCAAAAAGGGA GCGCAAGTCATGCTCATCAAAAACATGGAAGACACGCTCGTCAACGGCTCCATCGGCCGTGTCGTGGCATTCATG GACGAAGCCACCTTCGACTACTACATCGACAACGAGAACGAATTCTCAGGGGGGGCAGGAGAAGCAGGCAACAAC AGCGACGACGAGATCATGGCTCGCGCACGCAAGAAACTCAAGCCCATGGCCGCCAACAAGGACGGCAGTGGTCCC GGCGGCATAACGCTCACCCGTAAATGGCCCCTCGTATGCTTCGTGCAGCCTGACGGAACCGAACGCCATCTCCTC TGCCAGCCGGAGACGTGGAAGATCGAGCTTCCAAACGGAGAGGTGCAGGCGCAGCGCCAACAGGTGCCGCTTATT CTGGCTTGGGCTTTGTCCATCCATAAGGCGCAGGGGCAGACGCTGCAGCGGGTAAAGGTTGATTTGGGCCGCGTG TTTGAGAAGGGTCAGGCCTATGTTGCGCTGAGTCGTGCGACCTCGAAAGCTGGTCTTCAGGTCATGCGGTTCGAG GCGCGCAAGGTCATGGTTCATCCGAAGGTTACCGATTTTTATTCTAAGCTTGTTAGTATTAGTGATGTGATGAAG GCTTCGAAGAAGCCGAAGTCGGGTGGTGGTGGTGGCCCGGATCCTGAGGATGATTTCGAGCAGGATTATTTAGAG CATTTATATGGGTGA |
| Gene | >Ani_SJS100_1|g1014.t1 ATGTTCAAGAAAGCCGTCAAGGAACATTCAGTAGCGTCAGCGACTCCGCTACAGTCCACGCTTACGCGCAGCAAT AATGGAAGTGCTTCGATGAGACCCCCGCCGCCGTCCACAGGGGTTAAGCGCAAGATTGAGATGGCTACCGTGCGA GAGTCTAATCTGGGGTCCCTCCACGACGGTGTCTACTTCGATGAGAACGACTTCGACGACGATGACGACCTGGAC TTTGAGGAACCCGATCCATTCATTCCCCCTGCCCCCATAACCAGACCGAGCGTCCCGAAATCCGAACCGCCCAAG TACCCGTCCCTCCATGACATAGCTGCGCAAGAGGAAGATATACCGATAGTCGACTTGACTTCGCCGAGCAAGGTG GCAGCGGAGGTTAAATATCCTGATTTACCTCCAGTTCCAGATGAGAGCGTTCCGCCTTCCAGCAGCATACAAATC CCATGGTCTTCTTCGCCCCCCTCCCACTTCCAACAACCGACCAAGAAGCCTCGAACTTTACCATGGCTGAAAGAC GAGCCGGAACCAGAACCAGAACCACCGTCTCTGAAACCGCAAACGCCTATACGGCCGAAACGTACGGATCCCTGG AATCAATCATATAGCGCGATCAAGGATGGGCAAAGGGAACTGCGTCGGCAGAATAAAACTATGAAAGCACAAGCA AGCGGTCAAATACACAACCCTCGCACGAAGGTGGCTTCAATCTTTCTCAGCGATGAGCAACGCCATGTCCTGGAC GCGGTTGTACAGCAAGGGAAGAGTATATTCTTTACAGGATCTGCCGGAACGGGCAAGTCGGTGCTTATGAGGGAA ATCATCAAGAAACTGCGTGATAAGTATAAGAAAGAGCCGGACAGGGTTGCGGTAACAGCATCTACTGGCTTAGCA GCGTGTAATATCGAGGGCGTGACTCTCCACAGTTTCGCAGGTATTGGACTGGGGAAGGAACCTGTTCCGGAGCTT GTCAAGAAGGTCAGCATTGGCGTCGGCGGACCACACCAATAGACATTTGCTAACTACCTATAGATCAAGAAGAAT CAGAAAGCCCGCAATCGTTGGATGCGCACCAAGGTTCTGATCGTCGATGAAGTGTCCATGGTCGACGGCGATCTC TTCGACAAGCTAGAGGAAATCGCGCGTCGCATTAGGAATAATGGTCGTCCTTTCGGAGGTATACAACTAGTAGTC ACCGGTGACTTTTTCCAACTCCCTCCCGTCCCAGAGGGCAGCAACCGAGAAGCCAAATTCGCATTCGCAGCTGCG ACCTGGAACACCTCCATACAACACACCATCCTCCTAACCCATATTTTCCGTCAACGAGACCCCGAATTCGCCGAC ATGCTCAACGAGCTTCGCCTGGGAAAGATCTCACCACGGACCATCGACACATTCAAACAGCTTTCTCGGCCTCTC GACTTCCATGACTCCCTCGAGGCCACCGAACTGTAAGCCTGGCACACGCCCACACCACCAATCCCATCCCAAAAT TAAGCACCCAGCTCACTTCACCCCAGGTTCCCCACGCGCCAAGAAGTCGAGAGCGCCAACGGCGCCCGAATGAGC CGCCTATCTGGCGAAACAATGACCTTCAACGCCGTCGACAGCGGCACAATCCAAGACCCCCAATTCCGCGAACGC CTACTAGCCAACTGCATGGCGCCACCAGTGATCCACCTCAAAAAGGGAGCGCAAGTCATGCTCATCAAAAACATG GAAGACACGCTCGTCAACGGCTCCATCGGCCGTGTCGTGGCATTCATGGACGAAGCCACCTTCGACTACTACATC GACAACGAGAACGAATTCTCAGGGGGGGCAGGAGAAGCAGGCAACAACAGCGACGACGAGATCATGGCTCGCGCA CGCAAGAAACTCAAGCCCATGGCCGCCAACAAGGACGGCAGTGGTCCCGGCGGCATAACGCTCACCCGTAAATGG CCCCTCGTATGCTTCGTGCAGCCTGACGGAACCGAACGCCATCTCCTCTGCCAGCCGGAGACGTGGAAGATCGAG CTTCCAAACGGAGAGGTGCAGGCGCAGCGCCAACAGGTGCCGCTTATTCTGGCTTGGGCTTTGTCCATCCATAAG GCGCAGGGGCAGACGCTGCAGCGGGTAAAGGTTGATTTGGGCCGCGTGTTTGAGAAGGGTCAGGCCTATGTTGCG CTGAGTCGTGCGACCTCGAAAGCTGGTCTTCAGGTCATGCGGTTCGAGGCGCGCAAGGTCATGGTTCATCCGAAG GTTACCGATTTTTATTCTAAGCTTGTTAGTATTAGTGATGTGATGAAGGCTTCGAAGAAGCCGAAGTCGGGTGGT GGTGGTGGCCCGGATCCTGAGGATGATTTCGAGCAGGATTATTTAGAGCATTTATATGGGTGA |