Protein ID | Ani_SJS100_1|g1011.t1 |
Gene name | |
Location | scaffold_003:581665..584365 |
Strand | - |
Gene length (bp) | 2700 |
Transcript length (bp) | 2358 |
Coding sequence length (bp) | 2358 |
Protein length (aa) | 786 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF12738 | PTCB-BRCT | twin BRCT domain | 1.7E-07 | 16 | 80 |
PF12738 | PTCB-BRCT | twin BRCT domain | 4.2E-25 | 111 | 174 |
PF12738 | PTCB-BRCT | twin BRCT domain | 4.7E-10 | 425 | 490 |
PF00533 | BRCT | BRCA1 C Terminus (BRCT) domain | 6.6E-06 | 9 | 82 |
PF00533 | BRCT | BRCA1 C Terminus (BRCT) domain | 5.8E-15 | 106 | 179 |
PF00533 | BRCT | BRCA1 C Terminus (BRCT) domain | 6.6E-06 | 422 | 495 |
Orthofinder run ID | 3 |
Orthogroup | 453 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g1011.t1 MAEKVTSNKEHPLAGVVLCFTSILPEQRSELAIVASQMGATHKFDLTSDVTHLLIGEVNTPKYKFVARERTDITV LRPEWVEAVRQSWMQGGDTDIRSLEKEYKFPTFAGLSICITGFEDMSLRNRIQDTVTAHGAEFRKDLTKNVTHLI ARNTEGEKYKFATQWGIRIVTVKWFEDSLERGMVLEETLYHPLLPDEQQGAGAWNRSLPTPKPKVTNNENPSNPR PRKLRRIASAKLGDQNEGIWGDIVGTGFDSSDPRPSRESLQRTQSLTKRPSILQESRSFASETTFAEVQEPLQPP PPPPAAVERHEGFLGDCFFFIHGFSTKQTNVLRDHLSFNGAELVGSLSEFSRPDIPKRGHGLYTIVPYKMPRSQV PSTDDLAFECEVVTDMWLERCLDAKTLVPPESHTANTPIPSFPIKGFAGLKVCSTGFSRIDLLHLSKLVNLVGAT YHEYLTPSASVLICNDSGPVNPEKLRHTQEWGVPAVSADWLWASIRNEQKQPFDQYLIQKQPTQSRKSLEPRAGS RPEQKQPSNSNEHPRPRHEHEHEQSKPKTSKAQPPDTSSSDPEPNTKPSHPAQTTTSPLKRKPSDQHPSTSISTT TTQSALNQAVTSLLKNARPAQPSEPSTGPDDRHRPQRGRRPLLGRAASSLDHPKHFSFSRASSIDTLNEDGCGSV VESTTTTTTNPRIPSLSHTHSNQYEYQYPERNATLEEEDENEAPPMTQLDYEDPDAVAMREKFLQKAGKVVEKKK SNDLVAEGRLVPGLENGAWGTARRTRHTNRALDNL* |
Coding | >Ani_SJS100_1|g1011.t1 ATGGCAGAGAAAGTAACCTCAAACAAGGAGCATCCTCTTGCGGGGGTGGTCCTCTGCTTTACCTCCATTTTACCA GAGCAGCGGTCTGAACTCGCTATCGTCGCAAGTCAGATGGGAGCAACCCACAAGTTTGACCTTACCTCCGACGTC ACTCATCTACTCATCGGCGAAGTCAATACTCCGAAGTACAAGTTCGTGGCGCGCGAGCGGACTGATATCACAGTC CTGAGACCAGAATGGGTCGAAGCTGTTCGTCAATCATGGATGCAGGGAGGGGATACAGATATTCGTTCTCTGGAA AAAGAGTACAAATTTCCCACGTTTGCTGGGTTGTCTATCTGCATCACGGGATTCGAGGATATGTCGCTACGCAAT CGTATCCAGGATACGGTCACTGCCCATGGAGCCGAGTTCCGGAAAGACCTCACCAAGAACGTCACTCATCTGATC GCCAGGAATACGGAGGGTGAGAAATACAAATTCGCAACGCAGTGGGGTATCAGGATTGTCACGGTGAAGTGGTTC GAGGATAGTCTTGAGCGTGGCATGGTACTGGAAGAAACTCTTTATCACCCTCTTCTGCCTGATGAGCAACAGGGC GCTGGTGCCTGGAATCGATCGCTGCCTACTCCGAAACCGAAGGTTACCAATAACGAAAACCCCTCCAACCCTAGA CCGAGGAAACTTCGGAGGATTGCGAGCGCTAAGTTAGGTGATCAGAATGAAGGGATCTGGGGCGATATTGTCGGT ACGGGTTTCGACAGCAGCGATCCGAGGCCATCTAGAGAAAGTCTGCAGAGGACCCAGTCTTTGACAAAGAGGCCT TCTATCCTGCAAGAGTCGCGCTCATTTGCCAGCGAGACTACCTTTGCAGAAGTGCAGGAGCCCCTACAACCGCCC CCGCCCCCTCCGGCAGCTGTAGAGCGTCACGAAGGGTTTCTGGGCGATTGTTTCTTTTTCATTCATGGGTTCTCT ACTAAACAGACAAACGTATTGCGGGACCATCTCTCCTTCAACGGTGCAGAGCTGGTGGGCTCCTTGAGCGAGTTT TCCCGACCAGACATACCCAAAAGGGGCCATGGCCTCTATACTATCGTGCCCTACAAGATGCCCCGCTCACAGGTC CCATCCACGGATGACTTGGCTTTCGAATGCGAAGTGGTAACCGACATGTGGTTGGAAAGATGCCTCGATGCGAAG ACGCTGGTGCCGCCAGAGTCCCACACAGCGAACACTCCGATCCCTTCATTCCCCATCAAAGGATTCGCGGGACTG AAGGTCTGCTCTACTGGCTTCTCCCGAATTGACCTCCTCCATCTATCAAAGCTCGTTAACCTCGTTGGTGCCACC TACCACGAGTACTTGACACCCAGCGCCTCCGTACTTATATGCAATGACTCCGGCCCCGTGAACCCGGAGAAGCTG CGACACACCCAAGAATGGGGTGTCCCTGCTGTATCCGCCGACTGGCTCTGGGCCTCGATCCGCAACGAACAAAAA CAACCATTCGACCAATACTTAATTCAAAAGCAACCCACGCAAAGCCGAAAGTCTCTGGAACCTCGAGCCGGTTCT CGCCCAGAGCAGAAGCAACCATCCAACAGTAACGAGCACCCACGTCCCAGACATGAGCATGAGCACGAGCAATCA AAACCGAAAACAAGCAAGGCACAACCTCCAGACACATCCTCATCGGACCCCGAACCCAACACCAAACCCTCACAC CCAGCCCAAACCACCACCTCCCCCCTCAAGCGCAAACCCTCCGATCAACACCCCTCAACATCAATATCAACCACA ACCACCCAATCCGCCCTCAACCAAGCCGTAACTAGCCTCCTCAAAAACGCCCGACCAGCCCAGCCCTCCGAACCC AGCACCGGCCCCGACGACCGCCATCGACCCCAACGAGGTCGGAGACCCCTCCTCGGCCGGGCCGCATCCTCTCTC GACCACCCCAAACACTTCTCCTTCTCTCGCGCCAGCTCAATCGACACCTTGAACGAAGACGGATGCGGCAGCGTC GTCGAATCCACCACCACAACCACTACCAACCCCCGAATCCCCTCCCTGTCTCACACCCACAGCAACCAATACGAG TATCAGTACCCAGAGCGCAACGCCACCCTCGAAGAAGAGGACGAAAACGAGGCCCCGCCCATGACACAGCTGGAC TACGAGGACCCGGATGCAGTAGCCATGCGGGAGAAATTCCTTCAAAAGGCGGGGAAGGTGGTTGAGAAGAAGAAG TCGAATGATCTAGTAGCGGAGGGGAGACTCGTTCCCGGGTTAGAGAATGGGGCGTGGGGGACGGCGAGGAGGACG AGGCATACGAATCGTGCGTTGGATAATCTGTAA |
Transcript | >Ani_SJS100_1|g1011.t1 ATGGCAGAGAAAGTAACCTCAAACAAGGAGCATCCTCTTGCGGGGGTGGTCCTCTGCTTTACCTCCATTTTACCA GAGCAGCGGTCTGAACTCGCTATCGTCGCAAGTCAGATGGGAGCAACCCACAAGTTTGACCTTACCTCCGACGTC ACTCATCTACTCATCGGCGAAGTCAATACTCCGAAGTACAAGTTCGTGGCGCGCGAGCGGACTGATATCACAGTC CTGAGACCAGAATGGGTCGAAGCTGTTCGTCAATCATGGATGCAGGGAGGGGATACAGATATTCGTTCTCTGGAA AAAGAGTACAAATTTCCCACGTTTGCTGGGTTGTCTATCTGCATCACGGGATTCGAGGATATGTCGCTACGCAAT CGTATCCAGGATACGGTCACTGCCCATGGAGCCGAGTTCCGGAAAGACCTCACCAAGAACGTCACTCATCTGATC GCCAGGAATACGGAGGGTGAGAAATACAAATTCGCAACGCAGTGGGGTATCAGGATTGTCACGGTGAAGTGGTTC GAGGATAGTCTTGAGCGTGGCATGGTACTGGAAGAAACTCTTTATCACCCTCTTCTGCCTGATGAGCAACAGGGC GCTGGTGCCTGGAATCGATCGCTGCCTACTCCGAAACCGAAGGTTACCAATAACGAAAACCCCTCCAACCCTAGA CCGAGGAAACTTCGGAGGATTGCGAGCGCTAAGTTAGGTGATCAGAATGAAGGGATCTGGGGCGATATTGTCGGT ACGGGTTTCGACAGCAGCGATCCGAGGCCATCTAGAGAAAGTCTGCAGAGGACCCAGTCTTTGACAAAGAGGCCT TCTATCCTGCAAGAGTCGCGCTCATTTGCCAGCGAGACTACCTTTGCAGAAGTGCAGGAGCCCCTACAACCGCCC CCGCCCCCTCCGGCAGCTGTAGAGCGTCACGAAGGGTTTCTGGGCGATTGTTTCTTTTTCATTCATGGGTTCTCT ACTAAACAGACAAACGTATTGCGGGACCATCTCTCCTTCAACGGTGCAGAGCTGGTGGGCTCCTTGAGCGAGTTT TCCCGACCAGACATACCCAAAAGGGGCCATGGCCTCTATACTATCGTGCCCTACAAGATGCCCCGCTCACAGGTC CCATCCACGGATGACTTGGCTTTCGAATGCGAAGTGGTAACCGACATGTGGTTGGAAAGATGCCTCGATGCGAAG ACGCTGGTGCCGCCAGAGTCCCACACAGCGAACACTCCGATCCCTTCATTCCCCATCAAAGGATTCGCGGGACTG AAGGTCTGCTCTACTGGCTTCTCCCGAATTGACCTCCTCCATCTATCAAAGCTCGTTAACCTCGTTGGTGCCACC TACCACGAGTACTTGACACCCAGCGCCTCCGTACTTATATGCAATGACTCCGGCCCCGTGAACCCGGAGAAGCTG CGACACACCCAAGAATGGGGTGTCCCTGCTGTATCCGCCGACTGGCTCTGGGCCTCGATCCGCAACGAACAAAAA CAACCATTCGACCAATACTTAATTCAAAAGCAACCCACGCAAAGCCGAAAGTCTCTGGAACCTCGAGCCGGTTCT CGCCCAGAGCAGAAGCAACCATCCAACAGTAACGAGCACCCACGTCCCAGACATGAGCATGAGCACGAGCAATCA AAACCGAAAACAAGCAAGGCACAACCTCCAGACACATCCTCATCGGACCCCGAACCCAACACCAAACCCTCACAC CCAGCCCAAACCACCACCTCCCCCCTCAAGCGCAAACCCTCCGATCAACACCCCTCAACATCAATATCAACCACA ACCACCCAATCCGCCCTCAACCAAGCCGTAACTAGCCTCCTCAAAAACGCCCGACCAGCCCAGCCCTCCGAACCC AGCACCGGCCCCGACGACCGCCATCGACCCCAACGAGGTCGGAGACCCCTCCTCGGCCGGGCCGCATCCTCTCTC GACCACCCCAAACACTTCTCCTTCTCTCGCGCCAGCTCAATCGACACCTTGAACGAAGACGGATGCGGCAGCGTC GTCGAATCCACCACCACAACCACTACCAACCCCCGAATCCCCTCCCTGTCTCACACCCACAGCAACCAATACGAG TATCAGTACCCAGAGCGCAACGCCACCCTCGAAGAAGAGGACGAAAACGAGGCCCCGCCCATGACACAGCTGGAC TACGAGGACCCGGATGCAGTAGCCATGCGGGAGAAATTCCTTCAAAAGGCGGGGAAGGTGGTTGAGAAGAAGAAG TCGAATGATCTAGTAGCGGAGGGGAGACTCGTTCCCGGGTTAGAGAATGGGGCGTGGGGGACGGCGAGGAGGACG AGGCATACGAATCGTGCGTTGGATAATCTGTAA |
Gene | >Ani_SJS100_1|g1011.t1 ATGGCAGAGAAAGTAACCTCAAGTCAGTATTCCATTTATCTCCGCATCTAGCAGAAGGCAGACTAATTCCTCTTT AGACAAGGAGCATCCTCTTGCGGGGGTGGTCCTCTGCTTTACCTCCATTTTACCAGAGCAGCGGGTATGCTAAAC ACCCTCTAATGCGAGTACTTCTCGTTATTGTTTATAAGGAAAGAGGAAATACTGATGGGTATCTGTCGCATCTAG TCTGAACTCGCTATCGTCGCAAGTCAGATGGGAGCAACCCACAAGTTTGACCTTACCTCCGACGTCACTCATCTA CTCATCGGCGAAGTCAATACTCCGAAGTACAAGTTCGTGGCGCGCGAGCGGACTGATATCACAGTCCTGAGACCA GAATGGGTCGAAGCTGTTCGTCAATCATGGATGCAGGGAGGGGATACAGATATTCGTTCTCTGGAAAAAGAGTAC AAATTTCCCACGTTTGCTGGGTTGTCTATCTGCATCACGGGATTCGAGGATAGTGAGTAGGAATCACCGTACAAT CGGCGCACTGGAAGACTGGTCTAATGCTCGATGCTATAGTGTCGCTACGCAATCGTATCCAGGATACGGTCACTG CCCATGGAGCCGAGTTCCGGAAAGACCTCACCAAGAACGTCACTCATCTGATCGCCAGGAATACGGAGGGTGAGA AATACAAATTCGCAACGCAGTGGGGTATCAGGATTGTCACGGTGAAGTGGTTCGAGGATAGTCTTGAGCGTGGCA TGGTACTGGAAGAAACTCTTTATCACCCTCTTCTGCCTGATGAGCAACAGGGCGCTGGTGCCTGGAATCGATCGC TGCCTACTCCGAAACCGAAGGTTACCAATAACGAAAACCCCTCCAACCCTAGACCGAGGAAACTTCGGAGGATTG CGAGCGCTAAGTTAGGTGATCAGAATGAAGGGATCTGGGGCGATATTGTCGGTACGGGTTTCGACAGCAGCGATC CGAGGCCATCTAGAGAAAGTCTGCAGAGGACCCAGTCTTTGACAAAGAGGCCTTCTATCCTGCAAGAGTCGCGCT CATTTGCCAGCGAGACTACCTTTGCAGAAGTGCAGGAGCCCCTACAACCGCCCCCGCCCCCTCCGGCAGCTGTAG AGCGTCACGAAGGGTTTCTGGGCGATTGTTTCTTTTTCATTCATGGGTTCTCTACTAAACAGGTTAGTGTGCATA CCCTTGGACTTCCTTTTCACCTTCTAACTTTTCAAGACAAACGTATTGCGGGACCATCTCTCCTTCAACGGTGCA GAGCTGGTGGGCTCCTTGAGCGAGTTTTCCCGACCAGACATACCCAAAAGGGGCCATGGCCTCTATACTATCGTG CCCTACAAGATGCCCCGCTCACAGGTCCCATCCACGGATGACTTGGCTTTCGAATGCGAAGTGGTAACCGACATG TGGTTGGAAAGATGCCTCGATGCGAAGACGCTGGTGCCGCCAGAGTCCCACACAGCGAACACTCCGATCCCTTCA TTCCCCATCAAAGGTAAAGCCCCAATCAGCTCTCGTTAACGTCTAGCTGACAGTCCTAGGATTCGCGGGACTGAA GGTCTGCTCTACTGGCTTCTCCCGAATTGACCTCCTCCATCTATCAAAGCTCGTTAACCTCGTTGGTAAGTTGTC CCAAGCAGTTGAAGTACTCTGTCTAATTCTCTAGGTGCCACCTACCACGAGTACTTGACACCCAGCGCCTCCGTA CTTATATGCAATGACTCCGGCCCCGTGAACCCGGAGAAGCTGCGACACACCCAAGAATGGGGTGTCCCTGCTGTA TCCGCCGACTGGCTCTGGGCCTCGATCCGCAACGAACAAAAACAACCATTCGACCAATACTTAATTCAAAAGCAA CCCACGCAAAGCCGAAAGTCTCTGGAACCTCGAGCCGGTTCTCGCCCAGAGCAGAAGCAACCATCCAACAGTAAC GAGCACCCACGTCCCAGACATGAGCATGAGCACGAGCAATCAAAACCGAAAACAAGCAAGGCACAACCTCCAGAC ACATCCTCATCGGACCCCGAACCCAACACCAAACCCTCACACCCAGCCCAAACCACCACCTCCCCCCTCAAGCGC AAACCCTCCGATCAACACCCCTCAACATCAATATCAACCACAACCACCCAATCCGCCCTCAACCAAGCCGTAACT AGCCTCCTCAAAAACGCCCGACCAGCCCAGCCCTCCGAACCCAGCACCGGCCCCGACGACCGCCATCGACCCCAA CGAGGTCGGAGACCCCTCCTCGGCCGGGCCGCATCCTCTCTCGACCACCCCAAACACTTCTCCTTCTCTCGCGCC AGCTCAATCGACACCTTGAACGAAGACGGATGCGGCAGCGTCGTCGAATCCACCACCACAACCACTACCAACCCC CGAATCCCCTCCCTGTCTCACACCCACAGCAACCAATACGAGTATCAGTACCCAGAGCGCAACGCCACCCTCGAA GAAGAGGACGAAAACGAGGCCCCGCCCATGACACAGCTGGACTACGAGGACCCGGATGCAGTAGCCATGCGGGAG AAATTCCTTCAAAAGGCGGGGAAGGTGGTTGAGAAGAAGAAGTCGAATGATCTAGTAGCGGAGGGGAGACTCGTT CCCGGGTTAGAGAATGGGGCGTGGGGGACGGCGAGGAGGACGAGGCATACGAATCGTGCGTTGGATAATCTGTAA |