Protein ID | Ani_SJS100_1|g10096.t1 |
Gene name | |
Location | scaffold_105:33113..35527 |
Strand | + |
Gene length (bp) | 2414 |
Transcript length (bp) | 1371 |
Coding sequence length (bp) | 1371 |
Protein length (aa) | 457 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF12680 | SnoaL_2 | SnoaL-like domain | 1.4E-07 | 273 | 381 |
Orthofinder run ID | 3 |
Orthogroup | 10585 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g10096.t1 MLAEIDGLEIHVIVNDELDSISPSPNAAVKVASRFMGIPLMLVNSWTERGGATMEMRMDNVCCAMHGISLLLHAE AMSSILALKVISAQEILEDSELKSTILSMLRLHVITDTIPAGRECKALNKGHNWGMKELTLYWQADWSRIESISK SNKSYSTQVVVDVDPDRSASRGAQADQPISLEADPSFAEREAAGATVTPSRHSHISELMHWYPKQLRGGDDKSKS QFFALPNSTAFDYATEGVSHTRSLTFLKKHMNGPFFDLEVIWEEHTYFEFDNRSVEQTMATMVQERYVNHIPTMT GGIGRDELTRFYRDHFIFNNPPDTKNELISRTIGIDRVVDKFIMTFTHDSEVDWLIPGIPPTGRKLEIPFMAVVN IRGDRLYHEHITWYQATVLKQLGLMPEFLPFPYPLTGGKRPAHGRSFEVRAPVAGAETAAKMRHKSSVPSNQLFE GGIREV* |
Coding | >Ani_SJS100_1|g10096.t1 ATGCTTGCTGAAATCGATGGCCTCGAGATCCATGTTATCGTCAACGACGAACTCGACTCGATCTCCCCAAGTCCC AATGCAGCTGTAAAAGTGGCAAGTAGGTTTATGGGAATTCCCCTCATGCTGGTGAATTCCTGGACGGAGCGTGGT GGAGCCACTATGGAAATGCGCATGGACAACGTCTGTTGTGCCATGCATGGGATATCTCTACTCCTTCACGCAGAA GCAATGTCTTCGATTTTAGCCCTGAAGGTGATATCTGCGCAAGAAATACTCGAAGACTCAGAACTGAAATCGACA ATATTGAGCATGTTGCGCTTGCACGTTATCACCGACACCATTCCGGCGGGAAGAGAATGCAAAGCCCTGAATAAA GGCCATAATTGGGGTATGAAGGAGCTGACTCTGTATTGGCAGGCCGACTGGTCAAGGATTGAATCAATCAGTAAA AGCAACAAGTCTTATTCCACACAAGTAGTGGTCGATGTTGACCCAGATCGATCTGCATCCCGCGGAGCACAGGCC GACCAACCAATCTCCCTTGAAGCAGACCCTTCTTTTGCAGAGCGAGAAGCCGCTGGAGCCACTGTAACCCCCTCA CGCCACTCTCACATCTCGGAGCTTATGCACTGGTATCCGAAGCAGTTGAGGGGAGGGGATGATAAGTCAAAAAGC CAGTTCTTTGCCCTCCCAAATTCTACCGCATTCGATTATGCCACGGAGGGAGTCTCACATACGCGAAGCTTGACC TTCCTAAAAAAGCACATGAATGGCCCATTCTTCGACCTAGAGGTTATCTGGGAAGAACATACTTATTTTGAATTC GACAATCGATCAGTTGAGCAAACAATGGCAACAATGGTGCAAGAGCGCTATGTGAATCATATCCCAACGATGACG GGCGGGATTGGCCGTGATGAGCTCACCAGATTCTATCGCGACCATTTCATTTTCAACAACCCCCCAGATACCAAG AATGAATTGATAAGTCGGACTATCGGTATTGATCGGGTAGTTGATAAGTTTATAATGACTTTCACACATGATTCT GAAGTCGATTGGTTAATCCCTGGGATCCCTCCAACCGGCCGCAAGCTGGAGATCCCGTTCATGGCAGTGGTCAAT ATCCGAGGAGATCGCCTTTACCACGAACACATCACCTGGTACCAAGCCACTGTCCTCAAGCAGCTGGGCCTTATG CCAGAGTTTCTACCATTTCCATATCCACTTACTGGTGGGAAGAGGCCGGCCCACGGAAGAAGCTTTGAAGTTCGA GCACCGGTTGCAGGGGCTGAGACAGCAGCAAAAATGCGTCATAAGAGCTCTGTTCCGTCGAACCAGTTGTTCGAG GGGGGCATTCGGGAAGTTTGA |
Transcript | >Ani_SJS100_1|g10096.t1 ATGCTTGCTGAAATCGATGGCCTCGAGATCCATGTTATCGTCAACGACGAACTCGACTCGATCTCCCCAAGTCCC AATGCAGCTGTAAAAGTGGCAAGTAGGTTTATGGGAATTCCCCTCATGCTGGTGAATTCCTGGACGGAGCGTGGT GGAGCCACTATGGAAATGCGCATGGACAACGTCTGTTGTGCCATGCATGGGATATCTCTACTCCTTCACGCAGAA GCAATGTCTTCGATTTTAGCCCTGAAGGTGATATCTGCGCAAGAAATACTCGAAGACTCAGAACTGAAATCGACA ATATTGAGCATGTTGCGCTTGCACGTTATCACCGACACCATTCCGGCGGGAAGAGAATGCAAAGCCCTGAATAAA GGCCATAATTGGGGTATGAAGGAGCTGACTCTGTATTGGCAGGCCGACTGGTCAAGGATTGAATCAATCAGTAAA AGCAACAAGTCTTATTCCACACAAGTAGTGGTCGATGTTGACCCAGATCGATCTGCATCCCGCGGAGCACAGGCC GACCAACCAATCTCCCTTGAAGCAGACCCTTCTTTTGCAGAGCGAGAAGCCGCTGGAGCCACTGTAACCCCCTCA CGCCACTCTCACATCTCGGAGCTTATGCACTGGTATCCGAAGCAGTTGAGGGGAGGGGATGATAAGTCAAAAAGC CAGTTCTTTGCCCTCCCAAATTCTACCGCATTCGATTATGCCACGGAGGGAGTCTCACATACGCGAAGCTTGACC TTCCTAAAAAAGCACATGAATGGCCCATTCTTCGACCTAGAGGTTATCTGGGAAGAACATACTTATTTTGAATTC GACAATCGATCAGTTGAGCAAACAATGGCAACAATGGTGCAAGAGCGCTATGTGAATCATATCCCAACGATGACG GGCGGGATTGGCCGTGATGAGCTCACCAGATTCTATCGCGACCATTTCATTTTCAACAACCCCCCAGATACCAAG AATGAATTGATAAGTCGGACTATCGGTATTGATCGGGTAGTTGATAAGTTTATAATGACTTTCACACATGATTCT GAAGTCGATTGGTTAATCCCTGGGATCCCTCCAACCGGCCGCAAGCTGGAGATCCCGTTCATGGCAGTGGTCAAT ATCCGAGGAGATCGCCTTTACCACGAACACATCACCTGGTACCAAGCCACTGTCCTCAAGCAGCTGGGCCTTATG CCAGAGTTTCTACCATTTCCATATCCACTTACTGGTGGGAAGAGGCCGGCCCACGGAAGAAGCTTTGAAGTTCGA GCACCGGTTGCAGGGGCTGAGACAGCAGCAAAAATGCGTCATAAGAGCTCTGTTCCGTCGAACCAGTTGTTCGAG GGGGGCATTCGGGAAGTTTGA |
Gene | >Ani_SJS100_1|g10096.t1 ATGCTTGCTGAAATCGATGGCCTCGAGATCCATGTTATCGTCAACGACGAACTCGACTCGATCTCCCCAAGTCCC AATGCAGCTGTAAAAGTGGCAAGTAGGTTTATGGGAATTCCCCTCATGCTGGTGAATTCCTGGACGGAGCGTGGT GGAGCCACTATGGAAATGCGCATGGACAACGTCTGTTGTGCCATGCATGGGATATCTCTACTCCTTGTAAGCCTA TCCTTCGATCCTTCTAGTTACCTTTTCTTTCAGCTAGGAGGAAGAGAAACTTGACGGCTCACATCTAATCGATTG CCACAAAAAGCACGCAGAAGCAATGTCTTCGATTTTAGCCCTGAAGGTGATATCTGCGCAAGAAATACTCGAAGA CTCAGAACTGAAATCGACAATATTGAGCATGTTGCGCTTGCACGTTATCACCGACACCATTCCGGCGGGAAGAGA ATGCAAAGCCCTGAATAAAGGCCATAATTGGGGTATGAAGGAGCTGACTCTGTATTGGCAGGCCGACTGGTCAAG GATTGAATCAATCAGTAAAAGCAACAAGTCTTATTCCACACAAGTAGTGGTCGATGTTGACCCAGATCGATCTGC ATCCCGCGGAGCACAGGCCGACCAACCAATCTCCCTTGAAGCAGACCCTTCTTTTGCAGAGCGAGAAGCCGCTGG AGCCACTGTAACCCCCTCACGCCACTCTCACATCTCGGAGCTTATGCACTGGTATCCGAAGCAGTTGAGGGGAGG GGATGATAAGTCAAGTCAGAGAGCCACGCTACAACCACTTGCCTGGAGATCCCCCGCATTGACAGGAAAGGTGGC CAGATTGTCGGCCGAAAAGACAAAAATAATAGCTATTCCCCGATACATGCGGGGAAATGCGATAACCAAGACATT GTGCACGACTACTTAAGAGGCACTAAGGGCACCTACTTGGTAGATCACATAACATACCCCGTTACCCCCGGATCT TGTCTTTAACTTCAACACCAAGCAGATATGGATCAAACTTGTACGAGCATGACTGCATTACTTATTGGCGATTCT AACAGAACACGGCCAAACTCTTTCCTTCTCTCCCCTCTTACTCGCAGAGGCGTTGGCCCTGGTATGATTATCGTA CTTCCTGATGGCATTTCAGGTCAGCTAATCGAGGATCACTCTGCCCCTCCGCCTTCCGTAAAGTGGGCTGAGGAG GGATATACTGTCATCCAGATATGTGAATCTGCCCTCAGCCAGGAAACCGTGTTGTGCCAGGCGGTAGAGGAATTG GCGCAACATGACAAGTGCACGCCAAACGATATTATTGGTCTTATAGGTGAGGCTCTCACTCTAGCCCTCGCACTC AGGACTATTGCTTATTGAGACCGCAGCATATGGCTTTCATCTATGGGAAAGCCTGAAATCTCTTCCCGGCATCGA GAGAATCACGGCAGCTGTTGTGTACGCGGCAGCAAGCAACGCAACTCAGTTGATCTCAAGCGGCATTCCCACAAT GTACCATCTAGCTGGGAAAGCGGATACACCATTACAAAGAGCATTCAGTACAATGCAATATGACTATCCAAACAT AGAAAGCCAGTTCTTTGCCCTCCCAAATTCTACCGCATTCGATTATGCCACGGAGGGAGTCTCACATACGCGAAG CTTGACCTTCCTAAAAAAGCACATGAATGGCCCATTCTTCGACCTAGAGGTTATCTGGGAAGAACATACTTATTT TGAATTCGACAATCGATCAGTTGAGCAAACAATGGCAACAATGGTGCAAGAGCGCTATGTGAATCATATCCCAAC GGTTAGTAGCATGTAACCCAGTCATTAGTGTCTCAATTCAACCGGCTGACGCATTGTCTGAAGATGACGGGCGGG ATTGGCCGTGATGAGCTCACCAGATTCTATCGCGACCATTTCATTTTCAACAACCCCCCAGATACCAAGAATGAA TTGATAAGTCGGACTATCGGTATTGATCGGGTAGTTGATAAGTTTATAATGACTTTCACACATGATTCTGAAGTC GATTGGTTGTAAGTGATACCTTCCCATGTCCTGCATTATACATTCATAGTTATTTATACCGTTGTACTGATGGAC CTTCCAGAATCCCTGGGATCCCTCCAACCGGCCGCAAGCTGGAGATCCCGTTCATGGCAGTGGTCAATATCCGAG GAGATCGCCTTTACCACGAACACATCACCTGGTACCAAGCCACTGTCCTCAAGCAGCTGGGCCTTATGCCAGAGT TTCTACCATTTCCATATCCACTTACTGGTGGGAAGAGGCCGGCCCACGGAAGAAGCTTTGAAGTTCGAGCACCGG TTGCAGGGGCTGAGACAGCAGCAAAAATGCGTCATAAGAGCTCTGTTCCGTCGAACCAGTTGTTCGAGGGGGGCA TTCGGGAAGTTTGA |