Protein ID | Ani_SJS100_1|g10075.t1 |
Gene name | |
Location | scaffold_104:77788..80798 |
Strand | + |
Gene length (bp) | 3010 |
Transcript length (bp) | 2838 |
Coding sequence length (bp) | 2838 |
Protein length (aa) | 946 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF07500 | TFIIS_M | Transcription factor S-II (TFIIS), central domain | 2.3E-27 | 342 | 469 |
PF07744 | SPOC | SPOC domain | 4.1E-25 | 617 | 768 |
PF00628 | PHD | PHD-finger | 2.6E-10 | 59 | 110 |
GO Term | Description | Terminal node |
---|---|---|
GO:0006351 | transcription, DNA-templated | Yes |
GO:0009058 | biosynthetic process | No |
GO:0097659 | nucleic acid-templated transcription | No |
GO:0090304 | nucleic acid metabolic process | No |
GO:1901360 | organic cyclic compound metabolic process | No |
GO:0016070 | RNA metabolic process | No |
GO:0071704 | organic substance metabolic process | No |
GO:0043170 | macromolecule metabolic process | No |
GO:0044249 | cellular biosynthetic process | No |
GO:0044238 | primary metabolic process | No |
GO:0044271 | cellular nitrogen compound biosynthetic process | No |
GO:0009987 | cellular process | No |
GO:0008152 | metabolic process | No |
GO:0019438 | aromatic compound biosynthetic process | No |
GO:1901576 | organic substance biosynthetic process | No |
GO:0009059 | macromolecule biosynthetic process | No |
GO:0034654 | nucleobase-containing compound biosynthetic process | No |
GO:0044237 | cellular metabolic process | No |
GO:0034641 | cellular nitrogen compound metabolic process | No |
GO:0032774 | RNA biosynthetic process | No |
GO:1901362 | organic cyclic compound biosynthetic process | No |
GO:0006725 | cellular aromatic compound metabolic process | No |
GO:0006807 | nitrogen compound metabolic process | No |
GO:0008150 | biological_process | No |
GO:0046483 | heterocycle metabolic process | No |
GO:0006139 | nucleobase-containing compound metabolic process | No |
GO:0018130 | heterocycle biosynthetic process | No |
Orthofinder run ID | 3 |
Orthogroup | 426 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g10075.t1 MADEPRRSGRSTKGQHKNLDMITETPAKKSKAKAQPKEKPPKPSVEPTPAPSEEEEIIRCICGEYEEEEDVERDM ICCDRCSAWQHNDCMGLTYAKGEEPDEYFCEQCKPENHKVLLEKIARGEKPWEEAAEKRRKEAEEKKASRRRKGK KGGRRGRPSEPKAAEPKTSESKSVEPKASEPPTAERKTSESQASERQASERQASERKASEPKTETSTPARAATSA TPAPSSTAAPAAPPAPAAPVPEAETPAPEKNGHVPETQSTSAQKRKFDEHQEVQVPEPGPKTKQQKMSPPAPATP VPAAAAKPAQVKEEPSAPSSRKSSAAGTAVTDSSKSADQLTHPSRKSVAKALVKLFVEQITQAQERGSFQLPEGS GVKSVEEFARQLSLSLESAMYENICGGTGEPTEPYRSQLRTIMFNVKKNPSLRDRLLVGSLSPDALSKMSTQDMA SEELQQKDAEIKREAERQHIIVQEQGPRIRRTHKGEEFIEDDNQNVASEPVFSTAAARRSLADTDGSPAGQSPTT PGPQSQADDSRKASKSQDVDTKMTDGVTTHQDHFPARAHSPGGTSHEQVFPEVSAHIREQLPTARAQADAEIDQL LGDDEPDSPPYSPKDYHDEGSIWHGKVVMNPITEFTSSAKHVGGADLSGRIPWSQLAPPTLSIDGRIEIALASEY LCGLRFSSSTDVTVISISRPDSPKDRAGFDKLFSYFQDRSRYGVVGKHPLPAVKDTYLIPIEAGSTKKPEFIELL ENNALEDPTPERVMLVVFAVKTGDSNPPSVQPPSHFPSHEPGASASPLTVAAGTPQQAHFLTPGPPLASQFTPTP VSSYDGTPQTQIPYGHQAQPQHQQQPPPAAPQFTPYQPSQPNQPPLTGLAAAIQVLGAQANTPAIQQLLSHAPNA DASQLSVVRDILLRRPEVSSNYTMLIEELATATRTNGHGPQQNAR* |
Coding | >Ani_SJS100_1|g10075.t1 ATGGCCGATGAACCACGACGCTCCGGTCGCTCGACCAAGGGCCAGCACAAGAACCTCGATATGATCACCGAAACG CCCGCGAAGAAGTCCAAGGCGAAAGCCCAGCCGAAAGAGAAACCTCCCAAACCCTCCGTCGAACCGACGCCTGCT CCCAGCGAAGAAGAAGAGATTATTCGATGCATCTGTGGCGAATATGAAGAGGAGGAAGATGTTGAGCGCGACATG ATCTGCTGCGATCGATGTTCTGCCTGGCAACACAATGACTGTATGGGCCTGACATACGCGAAGGGGGAGGAACCG GACGAGTACTTCTGTGAGCAATGCAAGCCAGAGAATCATAAGGTTCTTCTCGAAAAGATCGCGCGTGGTGAAAAA CCGTGGGAGGAAGCTGCCGAAAAGAGGCGCAAGGAAGCCGAGGAGAAGAAAGCATCCCGACGCAGAAAGGGCAAG AAGGGCGGCCGAAGAGGCAGACCAAGTGAGCCCAAGGCGGCTGAGCCTAAGACAAGCGAATCTAAGTCGGTCGAA CCTAAGGCCAGCGAACCTCCGACGGCCGAGCGCAAGACGAGTGAGTCTCAAGCAAGTGAGCGTCAGGCAAGTGAG CGTCAGGCAAGCGAGCGCAAGGCTAGCGAGCCAAAGACAGAGACGAGCACACCTGCGCGCGCCGCAACCTCTGCA ACTCCCGCCCCATCCTCTACTGCTGCTCCTGCCGCGCCTCCTGCACCTGCTGCACCGGTCCCTGAAGCCGAGACG CCGGCTCCTGAGAAAAATGGACATGTTCCTGAGACGCAGTCGACAAGCGCCCAAAAACGCAAGTTTGATGAGCAC CAAGAGGTGCAAGTCCCTGAACCGGGACCGAAAACGAAGCAGCAAAAGATGTCACCGCCAGCACCTGCGACGCCT GTGCCAGCCGCTGCCGCCAAACCGGCTCAAGTGAAGGAGGAGCCCAGTGCGCCGTCTTCTCGGAAAAGTTCTGCT GCAGGAACAGCAGTGACGGATAGCTCGAAATCCGCGGACCAGCTTACGCATCCATCTCGCAAGAGTGTTGCCAAA GCTCTGGTCAAGTTATTTGTAGAGCAGATTACTCAGGCCCAGGAGCGAGGATCGTTCCAACTTCCCGAAGGGTCC GGAGTGAAATCAGTGGAGGAATTTGCCCGGCAGCTTTCTCTCTCACTCGAGAGCGCTATGTATGAGAATATATGC GGAGGAACTGGGGAGCCCACAGAGCCGTATAGGTCACAATTGCGGACGATCATGTTCAACGTAAAGAAGAACCCT TCTCTACGGGACCGTCTGCTCGTAGGTAGTTTATCTCCCGATGCCCTCTCTAAGATGAGCACCCAAGACATGGCA AGTGAGGAACTGCAGCAGAAGGATGCCGAGATCAAGCGGGAAGCTGAACGCCAGCACATCATCGTGCAAGAACAA GGGCCTCGCATTAGACGGACCCATAAGGGTGAAGAGTTCATTGAAGATGATAACCAAAATGTCGCCAGCGAGCCC GTCTTCTCAACTGCGGCCGCTCGACGCAGTCTGGCTGATACCGATGGCAGCCCCGCTGGCCAGAGCCCAACGACC CCTGGCCCCCAGTCCCAGGCTGATGACTCCCGGAAGGCATCGAAATCACAGGATGTTGACACCAAGATGACCGAC GGTGTCACCACTCACCAGGATCACTTCCCCGCGCGGGCTCATTCTCCGGGTGGCACCAGCCACGAGCAGGTCTTC CCCGAAGTGTCTGCTCATATCCGTGAGCAGTTGCCAACCGCTAGGGCTCAGGCTGATGCTGAGATCGATCAATTA TTAGGAGATGATGAGCCTGACTCGCCACCCTACTCCCCAAAGGACTATCATGACGAAGGGTCCATCTGGCATGGC AAGGTCGTCATGAACCCGATCACAGAGTTTACTTCCTCCGCGAAGCATGTCGGAGGAGCTGATTTGAGCGGACGC ATACCATGGAGTCAGCTTGCTCCACCGACATTGTCCATTGACGGAAGGATTGAGATTGCTCTCGCCAGCGAGTAC CTTTGCGGTCTGCGTTTCAGCTCTTCGACCGACGTGACGGTCATCTCGATCAGCCGCCCCGATTCCCCCAAGGAC CGTGCAGGATTCGACAAGCTGTTCAGCTACTTCCAAGACCGTTCGAGGTATGGTGTCGTTGGCAAACATCCATTG CCTGCTGTCAAGGATACCTACCTTATCCCTATCGAAGCAGGCTCCACCAAGAAGCCAGAGTTCATCGAGCTTCTA GAGAACAACGCTCTTGAAGATCCCACACCGGAGCGCGTCATGCTCGTTGTCTTTGCCGTCAAGACCGGCGATTCG AACCCACCATCAGTGCAGCCTCCTTCACACTTCCCAAGCCATGAGCCTGGTGCTTCTGCCAGTCCATTGACCGTG GCCGCGGGGACGCCCCAGCAGGCGCATTTCCTGACTCCTGGACCGCCGCTTGCGTCCCAGTTCACGCCCACTCCT GTATCATCTTACGACGGGACGCCTCAAACGCAAATACCTTATGGGCATCAAGCTCAGCCACAACACCAACAACAG CCACCACCAGCAGCTCCCCAATTCACTCCCTACCAGCCTTCCCAGCCCAACCAACCACCCCTCACCGGTCTCGCC GCCGCAATACAAGTGCTCGGTGCGCAAGCCAATACGCCCGCTATTCAACAACTGCTATCCCATGCCCCGAATGCA GACGCCTCACAGCTAAGCGTGGTCCGGGATATACTCCTACGTCGACCAGAAGTTAGCTCAAATTACACAATGTTG ATAGAAGAGTTAGCAACGGCGACCAGGACCAACGGCCACGGTCCACAGCAGAATGCACGGTAG |
Transcript | >Ani_SJS100_1|g10075.t1 ATGGCCGATGAACCACGACGCTCCGGTCGCTCGACCAAGGGCCAGCACAAGAACCTCGATATGATCACCGAAACG CCCGCGAAGAAGTCCAAGGCGAAAGCCCAGCCGAAAGAGAAACCTCCCAAACCCTCCGTCGAACCGACGCCTGCT CCCAGCGAAGAAGAAGAGATTATTCGATGCATCTGTGGCGAATATGAAGAGGAGGAAGATGTTGAGCGCGACATG ATCTGCTGCGATCGATGTTCTGCCTGGCAACACAATGACTGTATGGGCCTGACATACGCGAAGGGGGAGGAACCG GACGAGTACTTCTGTGAGCAATGCAAGCCAGAGAATCATAAGGTTCTTCTCGAAAAGATCGCGCGTGGTGAAAAA CCGTGGGAGGAAGCTGCCGAAAAGAGGCGCAAGGAAGCCGAGGAGAAGAAAGCATCCCGACGCAGAAAGGGCAAG AAGGGCGGCCGAAGAGGCAGACCAAGTGAGCCCAAGGCGGCTGAGCCTAAGACAAGCGAATCTAAGTCGGTCGAA CCTAAGGCCAGCGAACCTCCGACGGCCGAGCGCAAGACGAGTGAGTCTCAAGCAAGTGAGCGTCAGGCAAGTGAG CGTCAGGCAAGCGAGCGCAAGGCTAGCGAGCCAAAGACAGAGACGAGCACACCTGCGCGCGCCGCAACCTCTGCA ACTCCCGCCCCATCCTCTACTGCTGCTCCTGCCGCGCCTCCTGCACCTGCTGCACCGGTCCCTGAAGCCGAGACG CCGGCTCCTGAGAAAAATGGACATGTTCCTGAGACGCAGTCGACAAGCGCCCAAAAACGCAAGTTTGATGAGCAC CAAGAGGTGCAAGTCCCTGAACCGGGACCGAAAACGAAGCAGCAAAAGATGTCACCGCCAGCACCTGCGACGCCT GTGCCAGCCGCTGCCGCCAAACCGGCTCAAGTGAAGGAGGAGCCCAGTGCGCCGTCTTCTCGGAAAAGTTCTGCT GCAGGAACAGCAGTGACGGATAGCTCGAAATCCGCGGACCAGCTTACGCATCCATCTCGCAAGAGTGTTGCCAAA GCTCTGGTCAAGTTATTTGTAGAGCAGATTACTCAGGCCCAGGAGCGAGGATCGTTCCAACTTCCCGAAGGGTCC GGAGTGAAATCAGTGGAGGAATTTGCCCGGCAGCTTTCTCTCTCACTCGAGAGCGCTATGTATGAGAATATATGC GGAGGAACTGGGGAGCCCACAGAGCCGTATAGGTCACAATTGCGGACGATCATGTTCAACGTAAAGAAGAACCCT TCTCTACGGGACCGTCTGCTCGTAGGTAGTTTATCTCCCGATGCCCTCTCTAAGATGAGCACCCAAGACATGGCA AGTGAGGAACTGCAGCAGAAGGATGCCGAGATCAAGCGGGAAGCTGAACGCCAGCACATCATCGTGCAAGAACAA GGGCCTCGCATTAGACGGACCCATAAGGGTGAAGAGTTCATTGAAGATGATAACCAAAATGTCGCCAGCGAGCCC GTCTTCTCAACTGCGGCCGCTCGACGCAGTCTGGCTGATACCGATGGCAGCCCCGCTGGCCAGAGCCCAACGACC CCTGGCCCCCAGTCCCAGGCTGATGACTCCCGGAAGGCATCGAAATCACAGGATGTTGACACCAAGATGACCGAC GGTGTCACCACTCACCAGGATCACTTCCCCGCGCGGGCTCATTCTCCGGGTGGCACCAGCCACGAGCAGGTCTTC CCCGAAGTGTCTGCTCATATCCGTGAGCAGTTGCCAACCGCTAGGGCTCAGGCTGATGCTGAGATCGATCAATTA TTAGGAGATGATGAGCCTGACTCGCCACCCTACTCCCCAAAGGACTATCATGACGAAGGGTCCATCTGGCATGGC AAGGTCGTCATGAACCCGATCACAGAGTTTACTTCCTCCGCGAAGCATGTCGGAGGAGCTGATTTGAGCGGACGC ATACCATGGAGTCAGCTTGCTCCACCGACATTGTCCATTGACGGAAGGATTGAGATTGCTCTCGCCAGCGAGTAC CTTTGCGGTCTGCGTTTCAGCTCTTCGACCGACGTGACGGTCATCTCGATCAGCCGCCCCGATTCCCCCAAGGAC CGTGCAGGATTCGACAAGCTGTTCAGCTACTTCCAAGACCGTTCGAGGTATGGTGTCGTTGGCAAACATCCATTG CCTGCTGTCAAGGATACCTACCTTATCCCTATCGAAGCAGGCTCCACCAAGAAGCCAGAGTTCATCGAGCTTCTA GAGAACAACGCTCTTGAAGATCCCACACCGGAGCGCGTCATGCTCGTTGTCTTTGCCGTCAAGACCGGCGATTCG AACCCACCATCAGTGCAGCCTCCTTCACACTTCCCAAGCCATGAGCCTGGTGCTTCTGCCAGTCCATTGACCGTG GCCGCGGGGACGCCCCAGCAGGCGCATTTCCTGACTCCTGGACCGCCGCTTGCGTCCCAGTTCACGCCCACTCCT GTATCATCTTACGACGGGACGCCTCAAACGCAAATACCTTATGGGCATCAAGCTCAGCCACAACACCAACAACAG CCACCACCAGCAGCTCCCCAATTCACTCCCTACCAGCCTTCCCAGCCCAACCAACCACCCCTCACCGGTCTCGCC GCCGCAATACAAGTGCTCGGTGCGCAAGCCAATACGCCCGCTATTCAACAACTGCTATCCCATGCCCCGAATGCA GACGCCTCACAGCTAAGCGTGGTCCGGGATATACTCCTACGTCGACCAGAAGTTAGCTCAAATTACACAATGTTG ATAGAAGAGTTAGCAACGGCGACCAGGACCAACGGCCACGGTCCACAGCAGAATGCACGGTAG |
Gene | >Ani_SJS100_1|g10075.t1 ATGGCCGGTAAGCTATTGTATACCAAAAGTCGTGCGACCATTGTCGGACTTCCCGCTGGGTGGCGACTGGCAGCA CACTCCACTTCTGTCGGGACAGAAAGCTAACTACTAAGCCAGATGAACCACGACGCTCCGGTCGCTCGACCAAGG GCCAGCACAAGAACCTCGATATGATCACCGAAACGCCCGCGAAGAAGTCCAAGGCGAAAGCCCAGCCGAAAGAGA AACCTCCCAAACCCTCCGTCGAACCGACGCCTGCTCCCAGCGAAGAAGAAGAGATTATTCGATGCATCTGTGGCG AATATGAAGAGGAGGAAGATGTTGAGCGCGACATGATCTGCTGCGATCGATGTTCTGCCTGGCAACACAATGACT GTATGGGCCTGACATACGCGAAGGGGGAGGAACCGGACGAGTACTTCTGTGAGCAATGCAAGCCAGAGAATCATA AGGTTCTTCTCGAAAAGATCGCGCGTGGTGAAAAACCGTGGGAGGAAGCTGCCGAAAAGAGGCGCAAGGAAGCCG AGGAGAAGAAAGCATCCCGACGCAGAAAGGGCAAGAAGGGCGGCCGAAGAGGCAGACCAAGTGAGCCCAAGGCGG CTGAGCCTAAGACAAGCGAATCTAAGTCGGTCGAACCTAAGGCCAGCGAACCTCCGACGGCCGAGCGCAAGACGA GTGAGTCTCAAGCAAGTGAGCGTCAGGCAAGTGAGCGTCAGGCAAGCGAGCGCAAGGCTAGCGAGCCAAAGACAG AGACGAGCACACCTGCGCGCGCCGCAACCTCTGCAACTCCCGCCCCATCCTCTACTGCTGCTCCTGCCGCGCCTC CTGCACCTGCTGCACCGGTCCCTGAAGCCGAGACGCCGGCTCCTGAGAAAAATGGACATGTTCCTGAGACGCAGT CGACAAGCGCCCAAAAACGCAAGTTTGATGAGCACCAAGAGGTGCAAGTCCCTGAACCGGTAAGTTCTCGTTGTT CTAGTATCATGGGTAGGGGAGGGTTCCGCTAACACTGCCATATAAGGGACCGAAAACGAAGCAGCAAAAGATGTC ACCGCCAGCACCTGCGACGCCTGTGCCAGCCGCTGCCGCCAAACCGGCTCAAGTGAAGGAGGAGCCCAGTGCGCC GTCTTCTCGGAAAAGTTCTGCTGCAGGAACAGCAGTGACGGATAGCTCGAAATCCGCGGACCAGCTTACGCATCC ATCTCGCAAGAGTGTTGCCAAAGCTCTGGTCAAGTTATTTGTAGAGCAGATTACTCAGGCCCAGGAGCGAGGATC GTTCCAACTTCCCGAAGGGTCCGGAGTGAAATCAGTGGAGGAATTTGCCCGGCAGCTTTCTCTCTCACTCGAGAG CGCTATGTATGAGAATATATGCGGAGGAACTGGGGAGCCCACAGAGCCGTATAGGTCACAATTGCGGACGATCAT GTTCAACGTAAAGAAGAACCCTTCTCTACGGGACCGTCTGCTCGTAGGTAGTTTATCTCCCGATGCCCTCTCTAA GATGAGCACCCAAGACATGGCAAGTGAGGAACTGCAGCAGAAGGATGCCGAGATCAAGCGGGAAGCTGAACGCCA GCACATCATCGTGCAAGAACAAGGGCCTCGCATTAGACGGACCCATAAGGGTGAAGAGTTCATTGAAGATGATAA CCAAAATGTCGCCAGCGAGCCCGTCTTCTCAACTGCGGCCGCTCGACGCAGTCTGGCTGATACCGATGGCAGCCC CGCTGGCCAGAGCCCAACGACCCCTGGCCCCCAGTCCCAGGCTGATGACTCCCGGAAGGCATCGAAATCACAGGA TGTTGACACCAAGATGACCGACGGTGTCACCACTCACCAGGATCACTTCCCCGCGCGGGCTCATTCTCCGGGTGG CACCAGCCACGAGCAGGTCTTCCCCGAAGTGTCTGCTCATATCCGTGAGCAGTTGCCAACCGCTAGGGCTCAGGC TGATGCTGAGATCGATCAATTATTAGGAGATGATGAGCCTGACTCGCCACCCTACTCCCCAAAGGACTATCATGA CGAAGGGTCCATCTGGCATGGCAAGGTCGTCATGAACCCGATCACAGAGTTTACTTCCTCCGCGAAGCATGTCGG AGGAGCTGATTTGAGCGGACGCATACCATGGAGTCAGCTTGCTCCACCGACATTGTCCATTGACGGAAGGATTGA GATTGCTCTCGCCAGCGAGTACCTTTGCGGTCTGCGTTTCAGCTCTTCGACCGACGTGACGGTCATCTCGATCAG CCGCCCCGATTCCCCCAAGGACCGTGCAGGATTCGACAAGCTGTTCAGCTACTTCCAAGACCGTTCGAGGTATGG TGTCGTTGGCAAACATCCATTGCCTGCTGTCAAGGATACCTACCTTATCCCTATCGAAGCAGGCTCCACCAAGAA GCCAGAGTTCATCGAGCTTCTAGAGAACAACGCTCTTGAAGATCCCACACCGGAGCGCGTCATGCTCGTTGTCTT TGCCGTCAAGACCGGCGATTCGAACCCACCATCAGTGCAGCCTCCTTCACACTTCCCAAGCCATGAGCCTGGTGC TTCTGCCAGTCCATTGACCGTGGCCGCGGGGACGCCCCAGCAGGCGCATTTCCTGACTCCTGGACCGCCGCTTGC GTCCCAGTTCACGCCCACTCCTGTATCATCTTACGACGGGACGCCTCAAACGCAAATACCTTATGGGCATCAAGC TCAGCCACAACACCAACAACAGCCACCACCAGCAGCTCCCCAATTCACTCCCTACCAGCCTTCCCAGCCCAACCA ACCACCCCTCACCGGTCTCGCCGCCGCAATACAAGTGCTCGGTGCGCAAGCCAATACGCCCGCTATTCAACAACT GCTATCCCATGCCCCGAATGCAGACGCCTCACAGCTAAGCGTGGTCCGGGATATACTCCTACGTCGACCAGAAGT TAGCTCAAATTACACAATGTTGATAGAAGAGTTAGCAACGGCGACCAGGACCAACGGCCACGGTCCACAGCAGAA TGCACGGTAG |