© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g10034.t1 |
| Gene name | |
| Location | scaffold_103:63161..65040 |
| Strand | + |
| Gene length (bp) | 1879 |
| Transcript length (bp) | 1824 |
| Coding sequence length (bp) | 1824 |
| Protein length (aa) | 608 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13520 | AA_permease_2 | Amino acid permease | 3.7E-60 | 133 | 565 |
| PF00324 | AA_permease | Amino acid permease | 1.8E-27 | 136 | 451 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 28 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 128 | 150 | 22 |
| 2 | 165 | 187 | 22 |
| 3 | 208 | 230 | 22 |
| 4 | 245 | 267 | 22 |
| 5 | 280 | 302 | 22 |
| 6 | 317 | 339 | 22 |
| 7 | 362 | 384 | 22 |
| 8 | 404 | 426 | 22 |
| 9 | 482 | 504 | 22 |
| 10 | 509 | 531 | 22 |
| 11 | 544 | 566 | 22 |
| 12 | 571 | 590 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g10034.t1 MSHITFSNSESRSGNYHAPRDSLELASLASSPDSAPRSSRSSSPSGISSSRKLSLEDEDPLSSSNPQSQGPSGRP RSARSYSISSAFDFGATLFPLSQTTGGYAPLGVSAADREAGVADGSLERNKTLTYMNGLSLVIGLVIGSGIFSSP SQVNANAGSPGASLIAWVVAGLLAWTGAASYAELGGAIPLNGGSQVYLSKIFGELAGFLFTWCSVLVLKPGSAAI IAIIFGEYVVRAFVGADVETVNPWINKAVAFGGIFVVTLLNCISTRVAARIGDLFMFFKFVALLGVTIIGIIVAI TGHSSTGSANKEWKSGWFEGTNLDISAWAVALYAGLWAFDGWDNTNYVTGEFKNPNKDLPRVIHTAMPLVILSYL LANISYILVLPHSTIEATNTVAIQFGDKVFGHVGALIFALIVSASCIGALNATAFTSGRLVYAAGKEGYLPSIFG KLWTRDTSTNRLQRRSWATKVFSRLCGDGTRIGFTPIYAMALNSTLTLIYVIVGEFKTLVTFYGVAGYTFYFVTV LGLIILRVREPYLHRPYKTWISTPIIFCCVSLFLLSRAIIAEPLQTLIVVAFIVAGVPVYYWRIYKRDGRKAFPN WKFWQRR* |
| Coding | >Ani_SJS100_1|g10034.t1 ATGTCCCATATAACCTTCTCGAATTCCGAGTCCAGGTCGGGCAATTACCATGCTCCCAGGGATTCCCTCGAACTG GCGTCTTTAGCCTCGTCGCCCGACTCCGCCCCCAGATCCTCCCGCTCCTCGTCGCCCTCCGGCATTTCGTCGTCG CGCAAGCTCTCCCTCGAAGATGAAGATCCTCTTTCCAGCTCCAATCCACAGTCACAGGGCCCGTCAGGGCGCCCC CGATCGGCTCGCTCATACTCGATATCCTCGGCCTTTGATTTCGGGGCGACCTTGTTTCCCTTGTCTCAGACGACC GGTGGTTATGCACCGTTGGGGGTCTCGGCCGCTGACCGAGAGGCCGGAGTTGCTGATGGGTCCTTGGAGAGGAAC AAGACATTGACATATATGAATGGTCTATCTCTCGTGATTGGGCTGGTTATCGGCTCCGGTATCTTCTCATCTCCC AGCCAGGTCAATGCCAATGCGGGGTCGCCTGGTGCGTCGCTGATTGCATGGGTTGTTGCTGGCCTACTTGCATGG ACGGGGGCAGCCAGCTATGCAGAGCTCGGCGGAGCTATTCCCCTGAACGGAGGCTCCCAGGTCTATCTCTCTAAA ATCTTCGGGGAGCTGGCGGGCTTCCTGTTCACGTGGTGCTCAGTTTTGGTCTTGAAGCCGGGCAGTGCGGCTATC ATCGCAATCATCTTCGGAGAATACGTCGTAAGAGCCTTCGTTGGCGCCGATGTGGAAACGGTAAATCCCTGGATA AACAAGGCTGTTGCGTTTGGCGGGATTTTCGTGGTGACTTTGTTGAACTGTATTTCGACTAGAGTGGCTGCGCGC ATTGGTGACCTCTTCATGTTCTTCAAGTTTGTCGCGTTGCTGGGCGTCACCATCATCGGTATCATTGTGGCCATC ACAGGTCACTCATCGACTGGCAGTGCCAACAAGGAATGGAAGTCCGGCTGGTTCGAGGGCACGAACCTCGACATA TCCGCATGGGCTGTAGCACTGTACGCGGGTCTTTGGGCCTTTGACGGTTGGGACAACACAAACTACGTGACTGGC GAGTTCAAGAATCCCAACAAGGATCTTCCACGAGTGATCCACACAGCCATGCCACTAGTCATCCTCTCCTATCTC CTTGCCAATATCTCCTACATTCTCGTTCTCCCTCATTCGACTATTGAAGCGACCAATACCGTCGCCATTCAGTTC GGCGACAAGGTCTTTGGTCACGTGGGAGCCCTTATATTCGCGCTCATCGTATCCGCGAGTTGCATAGGCGCCTTG AACGCCACGGCCTTCACCAGCGGCCGTTTAGTTTATGCAGCCGGAAAAGAGGGCTATCTCCCCTCTATTTTCGGC AAACTATGGACTCGAGACACCTCCACCAACCGACTCCAGCGCCGCTCCTGGGCCACCAAGGTCTTTTCGCGCCTC TGTGGAGATGGCACGCGAATTGGCTTCACCCCCATTTACGCCATGGCGCTGAACAGTACACTCACCCTCATTTAC GTCATCGTCGGCGAATTCAAAACCCTTGTCACCTTTTACGGGGTAGCCGGGTACACCTTTTACTTCGTGACGGTG CTAGGCCTGATAATTCTTCGCGTGCGGGAACCCTACCTGCATCGCCCCTACAAGACCTGGATTTCCACTCCCATC ATCTTCTGCTGCGTTAGTCTCTTCCTCCTCAGCCGGGCTATCATTGCAGAACCGCTTCAGACATTAATTGTCGTC GCTTTCATCGTCGCCGGTGTCCCTGTCTATTATTGGCGGATCTACAAACGCGATGGACGAAAGGCGTTTCCTAAT TGGAAGTTTTGGCAACGCCGGTGA |
| Transcript | >Ani_SJS100_1|g10034.t1 ATGTCCCATATAACCTTCTCGAATTCCGAGTCCAGGTCGGGCAATTACCATGCTCCCAGGGATTCCCTCGAACTG GCGTCTTTAGCCTCGTCGCCCGACTCCGCCCCCAGATCCTCCCGCTCCTCGTCGCCCTCCGGCATTTCGTCGTCG CGCAAGCTCTCCCTCGAAGATGAAGATCCTCTTTCCAGCTCCAATCCACAGTCACAGGGCCCGTCAGGGCGCCCC CGATCGGCTCGCTCATACTCGATATCCTCGGCCTTTGATTTCGGGGCGACCTTGTTTCCCTTGTCTCAGACGACC GGTGGTTATGCACCGTTGGGGGTCTCGGCCGCTGACCGAGAGGCCGGAGTTGCTGATGGGTCCTTGGAGAGGAAC AAGACATTGACATATATGAATGGTCTATCTCTCGTGATTGGGCTGGTTATCGGCTCCGGTATCTTCTCATCTCCC AGCCAGGTCAATGCCAATGCGGGGTCGCCTGGTGCGTCGCTGATTGCATGGGTTGTTGCTGGCCTACTTGCATGG ACGGGGGCAGCCAGCTATGCAGAGCTCGGCGGAGCTATTCCCCTGAACGGAGGCTCCCAGGTCTATCTCTCTAAA ATCTTCGGGGAGCTGGCGGGCTTCCTGTTCACGTGGTGCTCAGTTTTGGTCTTGAAGCCGGGCAGTGCGGCTATC ATCGCAATCATCTTCGGAGAATACGTCGTAAGAGCCTTCGTTGGCGCCGATGTGGAAACGGTAAATCCCTGGATA AACAAGGCTGTTGCGTTTGGCGGGATTTTCGTGGTGACTTTGTTGAACTGTATTTCGACTAGAGTGGCTGCGCGC ATTGGTGACCTCTTCATGTTCTTCAAGTTTGTCGCGTTGCTGGGCGTCACCATCATCGGTATCATTGTGGCCATC ACAGGTCACTCATCGACTGGCAGTGCCAACAAGGAATGGAAGTCCGGCTGGTTCGAGGGCACGAACCTCGACATA TCCGCATGGGCTGTAGCACTGTACGCGGGTCTTTGGGCCTTTGACGGTTGGGACAACACAAACTACGTGACTGGC GAGTTCAAGAATCCCAACAAGGATCTTCCACGAGTGATCCACACAGCCATGCCACTAGTCATCCTCTCCTATCTC CTTGCCAATATCTCCTACATTCTCGTTCTCCCTCATTCGACTATTGAAGCGACCAATACCGTCGCCATTCAGTTC GGCGACAAGGTCTTTGGTCACGTGGGAGCCCTTATATTCGCGCTCATCGTATCCGCGAGTTGCATAGGCGCCTTG AACGCCACGGCCTTCACCAGCGGCCGTTTAGTTTATGCAGCCGGAAAAGAGGGCTATCTCCCCTCTATTTTCGGC AAACTATGGACTCGAGACACCTCCACCAACCGACTCCAGCGCCGCTCCTGGGCCACCAAGGTCTTTTCGCGCCTC TGTGGAGATGGCACGCGAATTGGCTTCACCCCCATTTACGCCATGGCGCTGAACAGTACACTCACCCTCATTTAC GTCATCGTCGGCGAATTCAAAACCCTTGTCACCTTTTACGGGGTAGCCGGGTACACCTTTTACTTCGTGACGGTG CTAGGCCTGATAATTCTTCGCGTGCGGGAACCCTACCTGCATCGCCCCTACAAGACCTGGATTTCCACTCCCATC ATCTTCTGCTGCGTTAGTCTCTTCCTCCTCAGCCGGGCTATCATTGCAGAACCGCTTCAGACATTAATTGTCGTC GCTTTCATCGTCGCCGGTGTCCCTGTCTATTATTGGCGGATCTACAAACGCGATGGACGAAAGGCGTTTCCTAAT TGGAAGTTTTGGCAACGCCGGTGA |
| Gene | >Ani_SJS100_1|g10034.t1 ATGTCCCATATAACCTTCTCGAATTCCGAGTCCAGGTCGGGCAATTACCATGCTCCCAGGGATTCCCTCGAACTG GCGTCTTTAGCCTCGTCGCCCGACTCCGCCCCCAGATCCTCCCGCTCCTCGTCGCCCTCCGGCATTTCGTCGTCG CGCAAGCTCTCCCTCGAAGATGAAGATCCTCTTTCCAGCTCCAATCCACAGTCACAGGGCCCGTCAGGGCGCCCC CGATCGGCTCGCTCATACTCGATATCCTCGGCCTTTGATTTCGGGGCGACCTTGTTTCCCTTGTCTCAGACGACC GGTGGTTATGCACCGTTGGGGGTCTCGGCCGCTGACCGAGAGGCCGGAGTTGCTGATGGGTCCTTGGAGAGGAAC AAGACATTGACATATATGAATGGTCTATCTCTCGTGATTGGGCTGGTTATCGGCTCCGGTATCTTCTCATCTCCC AGCCAGGTCAATGCCAATGCGGGGTCGCCTGGTGCGTCGCTGATTGCATGGGTTGTTGCTGGCCTACTTGCATGG ACGGGGGCAGCCAGCTATGCAGAGCTCGGCGGAGCTATTCCCCTGAACGGAGGCTCCCAGGTCTATCTCTCTAAA ATCTTCGGGGAGCTGGCGGGCTTCCTGTTCACGTGGTGCTCAGTTTTGGTCTTGAAGCCGGGCAGTGCGGCTATC ATCGCAATCATCTTCGGAGAATACGTCGTAAGAGCCTTCGTTGGCGCCGATGTGGAAACGGTAAATCCCTGGATA AACAAGGCTGTTGCGTTTGGCGGGATTTTCGTGGTGACTTTGTTGAACTGTATTTCGACTAGAGTGGCTGCGCGC ATTGGTGACCTCTTCATGTTCTTCAAGTTTGTCGCGTTGCTGGGCGTCACCATCATCGGTATCATTGTGGCCATC ACAGGTCACTCATCGACTGGCAGTGCCAACAAGGAATGGAAGTCCGGCTGGTTCGAGGGCACGAACCTCGACATA TCCGCATGGGCTGTAGCACTGTACGCGGGTCTTTGGGCCTTTGACGGTTGGGACAACGTACGTTTTTTACACACC CAGTATTCAACATTCATCTCTGACTGACTCCACCAAGACAAACTACGTGACTGGCGAGTTCAAGAATCCCAACAA GGATCTTCCACGAGTGATCCACACAGCCATGCCACTAGTCATCCTCTCCTATCTCCTTGCCAATATCTCCTACAT TCTCGTTCTCCCTCATTCGACTATTGAAGCGACCAATACCGTCGCCATTCAGTTCGGCGACAAGGTCTTTGGTCA CGTGGGAGCCCTTATATTCGCGCTCATCGTATCCGCGAGTTGCATAGGCGCCTTGAACGCCACGGCCTTCACCAG CGGCCGTTTAGTTTATGCAGCCGGAAAAGAGGGCTATCTCCCCTCTATTTTCGGCAAACTATGGACTCGAGACAC CTCCACCAACCGACTCCAGCGCCGCTCCTGGGCCACCAAGGTCTTTTCGCGCCTCTGTGGAGATGGCACGCGAAT TGGCTTCACCCCCATTTACGCCATGGCGCTGAACAGTACACTCACCCTCATTTACGTCATCGTCGGCGAATTCAA AACCCTTGTCACCTTTTACGGGGTAGCCGGGTACACCTTTTACTTCGTGACGGTGCTAGGCCTGATAATTCTTCG CGTGCGGGAACCCTACCTGCATCGCCCCTACAAGACCTGGATTTCCACTCCCATCATCTTCTGCTGCGTTAGTCT CTTCCTCCTCAGCCGGGCTATCATTGCAGAACCGCTTCAGACATTAATTGTCGTCGCTTTCATCGTCGCCGGTGT CCCTGTCTATTATTGGCGGATCTACAAACGCGATGGACGAAAGGCGTTTCCTAATTGGAAGTTTTGGCAACGCCG GTGA |