Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g10017.t1
Gene name
Locationscaffold_103:7164..7785
Strand-
Gene length (bp)621
Transcript length (bp)387
Coding sequence length (bp)387
Protein length (aa) 129

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04133 Vps55 Vacuolar protein sorting 55 2.8E-45 8 126

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 7 29 22
2 33 50 17
3 71 90 19
4 100 122 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g10017.t1
MTAGLKTIIALSFVLAIGFLLVILSSALWHNFLPLVVVATYVVAPLPNWICSRCANPDDFMDSSGNAAADFGRFL
TGFLVLMGIALPAVLAHSGAIEIPAMIMSIIGGLLIYGTIISFSMFFREQEDF*
Coding >Ani_SJS100_1|g10017.t1
ATGACCGCCGGACTCAAGACGATCATCGCCCTCTCCTTCGTTCTCGCCATTGGCTTCCTGCTTGTTATCCTGTCA
TCGGCGCTCTGGCACAACTTCCTCCCACTGGTCGTCGTTGCGACTTACGTGGTTGCTCCCCTGCCCAACTGGATC
TGCTCGCGATGCGCAAACCCCGATGATTTTATGGACAGCTCTGGCAATGCTGCTGCTGATTTTGGTCGTTTCCTC
ACCGGCTTCCTGGTGCTGATGGGTATTGCCCTCCCCGCCGTCCTTGCGCACAGCGGCGCTATCGAGATCCCCGCC
ATGATCATGTCCATCATTGGCGGTCTGTTGATCTACGGAACTATCATCAGTTTCTCCATGTTCTTCCGGGAACAG
GAAGACTTCTAA
Transcript >Ani_SJS100_1|g10017.t1
ATGACCGCCGGACTCAAGACGATCATCGCCCTCTCCTTCGTTCTCGCCATTGGCTTCCTGCTTGTTATCCTGTCA
TCGGCGCTCTGGCACAACTTCCTCCCACTGGTCGTCGTTGCGACTTACGTGGTTGCTCCCCTGCCCAACTGGATC
TGCTCGCGATGCGCAAACCCCGATGATTTTATGGACAGCTCTGGCAATGCTGCTGCTGATTTTGGTCGTTTCCTC
ACCGGCTTCCTGGTGCTGATGGGTATTGCCCTCCCCGCCGTCCTTGCGCACAGCGGCGCTATCGAGATCCCCGCC
ATGATCATGTCCATCATTGGCGGTCTGTTGATCTACGGAACTATCATCAGTTTCTCCATGTTCTTCCGGGAACAG
GAAGACTTCTAA
Gene >Ani_SJS100_1|g10017.t1
ATGACCGCCGGACTCAAGACGATCATCGCCCTCTCCTTCGTATGTCTTCTTTGGAGCTATATTGAAGCTTATTTG
CTTCTGCTGTTTGGGACTCTTGCTAATTGCTATCCCGGCATAGGTTCTCGCCATTGGCTTCCTGCTTGTTATCCT
GTCATCGGCGCTCTGGCACAACTTCCTCCCACTGGTCGTCGTTGCGACTTACGTGGTTGCTCCCCTGCCCAACTG
GATCTGCTCGCGATGCGCAAACCCCGATGATTTTATGGACAGCTCTGGCAATGCTGCTGCTGATTTTGGTCGTTT
CCTCACCGGCTTCCTGGTGCTGATGGGTATTGGTGAGTGGATTTCTCGGATAGGCGGGCTAGGTCGGCGGTCGCA
ATCATCCCTACCTACCATTGAAGCCGACTGCAGACTGTGCTGCGCCTGAATATACATGCCCTTGTTCTTTCCCAA
CTCTATTGATCCCCGCTGACCATTCTCACTTCACTAGCCCTCCCCGCCGTCCTTGCGCACAGCGGCGCTATCGAG
ATCCCCGCCATGATCATGTCCATCATTGGCGGTCTGTTGATCTACGGAACTATCATCAGTTTCTCCATGTTCTTC
CGGGAACAGGAAGACTTCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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