Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS100_1\|g10015.t1
Gene name
Location	scaffold_103:4042..4797
Strand	-
Gene length (bp)	755
Transcript length (bp)	522
Coding sequence length (bp)	522
Protein length (aa)	174

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF05255	UPF0220	Uncharacterised protein family (UPF0220)	4.1E-70	5	167

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 51	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	25	47	22
2	62	80	18
3	101	123	22
4	138	160	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS100_1\|g10015.t1 MDVSNNRLFRWSKPEWLNNSAVRNAGVYTSGALFSLGFFFLIDAAAFSHSARNGSFVHVKFVDWIPGICSALGML VINSIEKSRLHADSFSYSGSGVAWKARFVLFLGFALLAGGLAGSVTVMVLKYLVQGYPLPTLYFGIANVIANGLV MLSTIVLWISQNIEDDYTYNLAL*
Coding	>Ani_SJS100_1\|g10015.t1 ATGGACGTCTCTAACAACCGTCTTTTTCGCTGGTCCAAGCCCGAATGGCTTAACAACTCCGCCGTGCGCAACGCA GGCGTGTACACCTCCGGCGCACTGTTCTCCCTGGGTTTCTTCTTTCTCATCGACGCCGCCGCTTTCTCCCACAGC GCTCGTAACGGCTCCTTCGTGCACGTCAAATTCGTCGACTGGATCCCCGGCATCTGCTCCGCGCTGGGAATGCTC GTTATCAATTCGATCGAGAAGTCGCGTCTTCATGCCGATAGCTTCAGTTATAGTGGGAGTGGGGTTGCGTGGAAG GCGAGGTTTGTGCTGTTCTTGGGATTTGCGTTGCTCGCGGGTGGATTGGCTGGGAGTGTGACGGTCATGGTACTC AAATACCTGGTCCAGGGGTATCCCCTTCCGACACTCTACTTTGGTATTGCGAATGTTATTGCAAATGGACTGGTT ATGCTGAGCACCATCGTCCTATGGATCTCCCAGAATATAGAAGACGATTACACCTATAACCTTGCTCTGTGA
Transcript	>Ani_SJS100_1\|g10015.t1 ATGGACGTCTCTAACAACCGTCTTTTTCGCTGGTCCAAGCCCGAATGGCTTAACAACTCCGCCGTGCGCAACGCA GGCGTGTACACCTCCGGCGCACTGTTCTCCCTGGGTTTCTTCTTTCTCATCGACGCCGCCGCTTTCTCCCACAGC GCTCGTAACGGCTCCTTCGTGCACGTCAAATTCGTCGACTGGATCCCCGGCATCTGCTCCGCGCTGGGAATGCTC GTTATCAATTCGATCGAGAAGTCGCGTCTTCATGCCGATAGCTTCAGTTATAGTGGGAGTGGGGTTGCGTGGAAG GCGAGGTTTGTGCTGTTCTTGGGATTTGCGTTGCTCGCGGGTGGATTGGCTGGGAGTGTGACGGTCATGGTACTC AAATACCTGGTCCAGGGGTATCCCCTTCCGACACTCTACTTTGGTATTGCGAATGTTATTGCAAATGGACTGGTT ATGCTGAGCACCATCGTCCTATGGATCTCCCAGAATATAGAAGACGATTACACCTATAACCTTGCTCTGTGA
Gene	>Ani_SJS100_1\|g10015.t1 ATGGACGTCTCTAACAACCGTCTTTTTCGCTGGTCCAAGCCCGAATGGCTTAACAACTCCGCCGTGCGCAACGCA GGCGTGTACACCTCCGGCGCACTGGTAAGCTCCCATCGTCACCATCACCACCACCATCAAGCAACGCAACCACTC ACATGGCAGTAGTTCTCCCTGGGTTTCTTCTTTCTCATCGACGCCGCCGCTTTCTCCCACAGCGCTCGTAACGGC TCCTTCGTGCACGTCAAATTCGTCGACTGGATCCCCGGCATCTGCTCCGCGCTGGGAATGCTCGTTATCAATTCG ATCGAGAAGTCGCGTCTTCATGCCGATAGCTTCAGTTATAGTGGGAGTGGGGTTGCGTGGAAGGCGAGGTTTGTG CTGTTCTTGGGATTTGCGTTGCTCGCGGGTGGATTGGCTGGGAGTGTGGTCAGTATTCACCTACATATAATTCCT TCCCTTGTTACCCTCTTATCTGTTGTTTAGGGTATCGGGGTCGCCGGAGTAGAGTGGTTAGGCTAACACATGGCA ATATAGACGGTCATGGTACTCAAATACCTGGTCCAGGGGTATCCCCTTCCGACACTCTACTTTGGTATTGCGAAT GTTATTGCAAATGGACTGGTTATGCTGAGGTGTGTATTCCGTAGGAAAACACAAGCAGGAACATATTTACTAATG AACTTTGCGATTGCAGCACCATCGTCCTATGGATCTCCCAGAATATAGAAGACGATTACACCTATAACCTTGCTC TGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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