© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g10010.t1 |
| Gene name | |
| Location | scaffold_102:84344..85780 |
| Strand | - |
| Gene length (bp) | 1436 |
| Transcript length (bp) | 1011 |
| Coding sequence length (bp) | 1011 |
| Protein length (aa) | 337 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02800 | Gp_dh_C | Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain | 1.6E-74 | 156 | 313 |
| PF00044 | Gp_dh_N | Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain | 1.7E-38 | 4 | 103 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | Yes |
| GO:0051287 | NAD binding | Yes |
| GO:0000166 | nucleotide binding | No |
| GO:0003824 | catalytic activity | No |
| GO:0016491 | oxidoreductase activity | No |
| GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | No |
| GO:0005488 | binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0036094 | small molecule binding | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 13 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g10010.t1 MAPKVGINGFGRIGRIVFRNAINHGEVDVVAVNDPFIETHYAAYMLKYDSTHGQFKGTIETYEEGLIVNGKKIRF FAERDPAAIPWGTTGADYIVESTGVFTTQEKAAAHLKGGAKKVVISAPSADAPMFVMGVNNTSYTKDINVLSNAS CTTNCLAPLAKVINDKFGIVEGLMTTVHSYTATQKVVDAPSSKDWRGGRTAAQNIIPSSTGAAKAVGKVIPTLNG KLTGMAMRVPTSNVSVVDLTCRLEKATSYDEIKKALKDASENELKGILGYTEDDIVSSDLNGDDHSSIFDAKAGI ALNSNFVKLVSWYDNEWGYSRRVVDLIAYISKVDAQ* |
| Coding | >Ani_SJS100_1|g10010.t1 ATGGCTCCCAAGGTCGGTATCAACGGCTTCGGTCGTATCGGACGTATCGTCTTCCGTAACGCCATCAACCACGGC GAGGTTGACGTCGTTGCTGTCAACGACCCCTTCATCGAGACCCACTATGCTGCCTACATGCTCAAGTACGACAGC ACCCACGGCCAGTTCAAGGGCACCATCGAGACCTACGAGGAGGGTCTGATTGTCAACGGCAAGAAGATCCGCTTC TTCGCTGAGCGTGACCCCGCTGCCATCCCCTGGGGCACCACCGGCGCTGACTACATCGTCGAGTCCACTGGTGTC TTCACCACCCAGGAGAAGGCCGCCGCTCACTTGAAGGGTGGTGCCAAGAAGGTCGTCATCTCTGCTCCTTCCGCT GATGCCCCCATGTTCGTCATGGGTGTCAACAACACCTCCTACACCAAGGACATCAACGTCCTCTCCAACGCTTCT TGCACCACCAACTGCCTTGCTCCCCTCGCCAAGGTCATCAACGACAAGTTCGGCATCGTTGAGGGTCTCATGACC ACCGTCCACTCCTACACCGCTACCCAGAAGGTCGTCGATGCCCCCTCCAGCAAGGACTGGCGTGGTGGCCGTACT GCGGCCCAGAACATCATCCCCTCTTCCACCGGTGCTGCCAAGGCTGTCGGCAAGGTCATCCCTACCCTTAACGGC AAGCTCACCGGTATGGCCATGCGTGTCCCCACCTCCAACGTCTCCGTTGTCGACTTGACCTGCCGCCTCGAGAAG GCCACCAGCTACGACGAGATCAAGAAGGCCCTCAAGGACGCTTCCGAGAACGAGCTCAAGGGCATCCTCGGCTAC ACTGAGGACGACATCGTCTCCTCCGACCTGAACGGTGACGACCACTCCTCCATCTTCGATGCCAAGGCCGGTATC GCCCTTAACTCCAACTTCGTCAAGCTCGTCTCCTGGTACGACAACGAGTGGGGTTACTCCCGCCGTGTCGTCGAC CTCATTGCCTACATCTCCAAGGTTGATGCCCAGTAG |
| Transcript | >Ani_SJS100_1|g10010.t1 ATGGCTCCCAAGGTCGGTATCAACGGCTTCGGTCGTATCGGACGTATCGTCTTCCGTAACGCCATCAACCACGGC GAGGTTGACGTCGTTGCTGTCAACGACCCCTTCATCGAGACCCACTATGCTGCCTACATGCTCAAGTACGACAGC ACCCACGGCCAGTTCAAGGGCACCATCGAGACCTACGAGGAGGGTCTGATTGTCAACGGCAAGAAGATCCGCTTC TTCGCTGAGCGTGACCCCGCTGCCATCCCCTGGGGCACCACCGGCGCTGACTACATCGTCGAGTCCACTGGTGTC TTCACCACCCAGGAGAAGGCCGCCGCTCACTTGAAGGGTGGTGCCAAGAAGGTCGTCATCTCTGCTCCTTCCGCT GATGCCCCCATGTTCGTCATGGGTGTCAACAACACCTCCTACACCAAGGACATCAACGTCCTCTCCAACGCTTCT TGCACCACCAACTGCCTTGCTCCCCTCGCCAAGGTCATCAACGACAAGTTCGGCATCGTTGAGGGTCTCATGACC ACCGTCCACTCCTACACCGCTACCCAGAAGGTCGTCGATGCCCCCTCCAGCAAGGACTGGCGTGGTGGCCGTACT GCGGCCCAGAACATCATCCCCTCTTCCACCGGTGCTGCCAAGGCTGTCGGCAAGGTCATCCCTACCCTTAACGGC AAGCTCACCGGTATGGCCATGCGTGTCCCCACCTCCAACGTCTCCGTTGTCGACTTGACCTGCCGCCTCGAGAAG GCCACCAGCTACGACGAGATCAAGAAGGCCCTCAAGGACGCTTCCGAGAACGAGCTCAAGGGCATCCTCGGCTAC ACTGAGGACGACATCGTCTCCTCCGACCTGAACGGTGACGACCACTCCTCCATCTTCGATGCCAAGGCCGGTATC GCCCTTAACTCCAACTTCGTCAAGCTCGTCTCCTGGTACGACAACGAGTGGGGTTACTCCCGCCGTGTCGTCGAC CTCATTGCCTACATCTCCAAGGTTGATGCCCAGTAG |
| Gene | >Ani_SJS100_1|g10010.t1 ATGGCTCCCAAGGTACGCCAACTACCAGGCGCGGTTCAGCTATCTACCAGCCTGATGATCTCGTATACTCACATC AATGCTATTTAGGTCGGTATCAACGGCTTCGGTCGTATCGGACGTATCGTAAGTTGCTCTTCCCGCATTACTGCT TTCAGTTGGTAGAGACTAACTCGGGTGTACAGGTCTTCCGTAACGCGTGAGTGCTGTCCTTCACCCGTAACTTGA CGGGCCCACCCGGGGCCCATGGAGTCAAACCGACATTGCGAGAATGTTATACTGACATGTTTGGCTACACAGCAT CAACCACGGCGAGGTTGACGTCGTTGCTGTCAACGACCCCTTCATCGAGACCCACTATGCTGTACGTTCTGCCCT CATGCATTGTCTGCTACAGATCAACCAGAAGCAAGTGGCTAACGGAGTGAATCTGCAATAGGCCTACATGCTCAA GTACGACAGCACCCACGGCCAGTTCAAGGGCACCATCGAGACCTACGAGGAGGGTCTGATTGTCAACGGCAAGAA GATCCGCTTCTTCGCTGAGCGTGACCCCGCTGCCATCCCCTGGGGCACCACCGGCGCTGACTACATCGTCGAGTC CACTGGTGTCTTCACCACCCAGGAGAAGGCCGCCGCTCACTTGAAGGGTGGTGCCAAGAAGGTCGTCATCTCTGC TCCTTCCGCTGATGCCCCCATGTTCGTCATGGGTGTCAACAACACCTCCTACACCAAGGACATCAACGTCCTCTC CAACGCTTCTTGCACCACCAACTGCCTTGCTCCCCTCGCCAAGGTCATCAACGACAAGTTCGGCATCGTTGAGGG TCTCATGACCACCGTCCACTCCTACACCGCTACCCAGAAGGTCGTCGATGCCCCCTCCAGCAAGGACTGGCGTGG TGGCCGTACTGCGGCCCAGAACATCATCCCCTCTTCCACCGGTGCTGCCAAGGCTGTCGGCAAGGTCATCCCTAC CCTTAACGGCAAGCTCACCGGTATGGCCATGCGTGTCCCCACCTCCAACGTCTCCGTTGTCGACTTGACCTGCCG CCTCGAGAAGGCCACCAGCTACGACGAGATCAAGAAGGCCCTCAAGGACGCTTCCGAGAACGAGCTCAAGGGTGA GTTTCCCAAGATGAAATGACACCGTCTGGCTTGACCACTAATCTCTTCCCAGGCATCCTCGGCTACACTGAGGAC GACATCGTCTCCTCCGACCTGAACGGTGACGACCACTCCTCCATCTTCGATGCCAAGGCCGGTATCGCCCTTAAC TCCAACTTCGTCAAGCTCGTCTCCTGGTACGACAACGAGTGGGGTTACTCCCGCCGTGTCGTCGACCTCATTGGT AAGAACCTCCTATTCTCCTATAAGAAATTGGTGACATCTCACTAACCTCTCTTTTAGCCTACATCTCCAAGGTTG ATGCCCAGTAG |