© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g10002.t1 |
| Gene name | |
| Location | scaffold_102:61404..63321 |
| Strand | + |
| Gene length (bp) | 1917 |
| Transcript length (bp) | 1593 |
| Coding sequence length (bp) | 1593 |
| Protein length (aa) | 531 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13520 | AA_permease_2 | Amino acid permease | 5.4E-56 | 62 | 503 |
| PF00324 | AA_permease | Amino acid permease | 3.6E-26 | 76 | 510 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 56 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 59 | 81 | 22 |
| 2 | 91 | 110 | 19 |
| 3 | 144 | 166 | 22 |
| 4 | 181 | 203 | 22 |
| 5 | 212 | 234 | 22 |
| 6 | 254 | 271 | 17 |
| 7 | 292 | 314 | 22 |
| 8 | 343 | 365 | 22 |
| 9 | 395 | 417 | 22 |
| 10 | 421 | 443 | 22 |
| 11 | 463 | 485 | 22 |
| 12 | 495 | 514 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g10002.t1 MPDNVELTTTKGGNNISTVFADQGLAKGHVAQKYIGTMADQRDMQALGKEQVLRRNFRFISIVAFGCTLIASWEV VLTMMSSPLVDGGTAGFIWGFIVVSVGVLLLFASLAEMASMAPTAGGQYHWVSEFAPRKYQKFLSYITGWLCATG WECAIVSIAFLAGTIIQGLVILNYPDYVSERWHGTLITIAITLFSVLFNTFLAKKLPLVEAFILILHVAGFFIVI IPLWVLAPIKDAKTVFTQFTNGGDWNSNGTATMVGLITAITAMIGYDCTVHMSEEVRDASTTLPKAIMAACSLNG VLAFVVMVTLCFTLGNVDEVLDSATGYPFIQVFFNATKSYAATNAMTAIVTMSLIASVITEVATASRQLWSFARD GGVPLATFFGHVNPNWNIPLNAVLVSLVLTMLLSLINIGSTVALDALITLTVGALLNSYIVTVSCVAWKRIRGEP LPPHRWSLGRWGLWVNLGALAFLIPEFVFVMFPLYSTVDPENMNWSSLMYGGMLIFSIIYYVLYGRKTYVPPVAL VKREI* |
| Coding | >Ani_SJS100_1|g10002.t1 ATGCCGGATAATGTTGAACTCACAACCACCAAGGGTGGAAATAATATTTCCACTGTATTCGCTGATCAAGGGCTT GCCAAAGGTCATGTCGCCCAGAAGTATATCGGCACTATGGCCGACCAAAGGGATATGCAGGCTTTGGGAAAGGAA CAAGTTCTCAGGAGAAATTTTAGGTTCATCTCAATTGTTGCCTTCGGATGTACCCTCATTGCTTCATGGGAAGTC GTGCTAACTATGATGAGTTCGCCTCTGGTTGATGGTGGCACGGCTGGATTTATCTGGGGTTTCATCGTTGTTTCG GTTGGAGTGTTGCTGCTGTTCGCCAGTCTGGCGGAAATGGCTTCCATGGCACCCACTGCTGGTGGCCAATACCAT TGGGTATCAGAGTTTGCACCTAGGAAGTACCAGAAGTTCTTGAGTTATATCACTGGATGGCTCTGTGCCACAGGC TGGGAATGCGCGATTGTGTCAATTGCTTTCCTAGCAGGTACCATCATTCAAGGACTGGTTATCCTGAATTACCCT GATTATGTTTCTGAGCGGTGGCACGGTACTCTCATTACAATTGCCATCACCCTTTTCTCCGTTCTTTTCAACACT TTCCTAGCCAAGAAGCTCCCTCTCGTTGAAGCCTTCATCTTGATCCTCCACGTTGCCGGATTTTTCATTGTGATT ATACCCCTTTGGGTGCTGGCACCCATCAAGGATGCGAAAACGGTTTTCACCCAGTTTACGAACGGTGGTGATTGG AATAGCAATGGTACCGCAACGATGGTCGGTCTGATTACTGCTATCACTGCCATGATTGGCTACGACTGTACTGTC CACATGTCCGAGGAAGTTCGAGACGCTTCTACAACCCTTCCCAAGGCTATCATGGCAGCGTGCTCCCTAAACGGG GTCCTGGCCTTTGTTGTTATGGTCACTTTGTGTTTCACCTTGGGTAATGTAGATGAGGTCCTCGACTCCGCTACT GGTTACCCTTTCATTCAGGTCTTTTTCAATGCCACCAAAAGTTACGCAGCTACAAACGCAATGACTGCAATTGTC ACCATGTCGCTTATTGCCAGTGTCATCACTGAGGTCGCCACTGCGTCTCGTCAACTTTGGTCATTCGCCCGTGAT GGGGGCGTCCCACTGGCTACCTTTTTCGGTCATGTCAACCCAAATTGGAACATCCCCCTCAATGCTGTTCTAGTG TCCCTCGTGCTCACGATGCTGCTATCGCTCATCAACATCGGCTCGACTGTCGCCCTAGACGCCTTGATCACCCTA ACTGTCGGAGCATTGTTGAATTCCTACATCGTCACTGTTTCCTGTGTCGCATGGAAAAGAATTCGCGGGGAACCG TTGCCCCCACACAGGTGGTCACTCGGCCGATGGGGACTTTGGGTAAACCTCGGGGCCCTGGCTTTCCTCATCCCG GAGTTCGTTTTCGTCATGTTCCCCCTTTACTCGACTGTGGACCCCGAAAACATGAACTGGAGCTCGCTCATGTAT GGTGGCATGTTGATTTTTTCCATCATCTACTATGTGTTGTATGGGCGGAAAACTTATGTGCCGCCCGTGGCCCTG GTCAAGCGCGAAATTTGA |
| Transcript | >Ani_SJS100_1|g10002.t1 ATGCCGGATAATGTTGAACTCACAACCACCAAGGGTGGAAATAATATTTCCACTGTATTCGCTGATCAAGGGCTT GCCAAAGGTCATGTCGCCCAGAAGTATATCGGCACTATGGCCGACCAAAGGGATATGCAGGCTTTGGGAAAGGAA CAAGTTCTCAGGAGAAATTTTAGGTTCATCTCAATTGTTGCCTTCGGATGTACCCTCATTGCTTCATGGGAAGTC GTGCTAACTATGATGAGTTCGCCTCTGGTTGATGGTGGCACGGCTGGATTTATCTGGGGTTTCATCGTTGTTTCG GTTGGAGTGTTGCTGCTGTTCGCCAGTCTGGCGGAAATGGCTTCCATGGCACCCACTGCTGGTGGCCAATACCAT TGGGTATCAGAGTTTGCACCTAGGAAGTACCAGAAGTTCTTGAGTTATATCACTGGATGGCTCTGTGCCACAGGC TGGGAATGCGCGATTGTGTCAATTGCTTTCCTAGCAGGTACCATCATTCAAGGACTGGTTATCCTGAATTACCCT GATTATGTTTCTGAGCGGTGGCACGGTACTCTCATTACAATTGCCATCACCCTTTTCTCCGTTCTTTTCAACACT TTCCTAGCCAAGAAGCTCCCTCTCGTTGAAGCCTTCATCTTGATCCTCCACGTTGCCGGATTTTTCATTGTGATT ATACCCCTTTGGGTGCTGGCACCCATCAAGGATGCGAAAACGGTTTTCACCCAGTTTACGAACGGTGGTGATTGG AATAGCAATGGTACCGCAACGATGGTCGGTCTGATTACTGCTATCACTGCCATGATTGGCTACGACTGTACTGTC CACATGTCCGAGGAAGTTCGAGACGCTTCTACAACCCTTCCCAAGGCTATCATGGCAGCGTGCTCCCTAAACGGG GTCCTGGCCTTTGTTGTTATGGTCACTTTGTGTTTCACCTTGGGTAATGTAGATGAGGTCCTCGACTCCGCTACT GGTTACCCTTTCATTCAGGTCTTTTTCAATGCCACCAAAAGTTACGCAGCTACAAACGCAATGACTGCAATTGTC ACCATGTCGCTTATTGCCAGTGTCATCACTGAGGTCGCCACTGCGTCTCGTCAACTTTGGTCATTCGCCCGTGAT GGGGGCGTCCCACTGGCTACCTTTTTCGGTCATGTCAACCCAAATTGGAACATCCCCCTCAATGCTGTTCTAGTG TCCCTCGTGCTCACGATGCTGCTATCGCTCATCAACATCGGCTCGACTGTCGCCCTAGACGCCTTGATCACCCTA ACTGTCGGAGCATTGTTGAATTCCTACATCGTCACTGTTTCCTGTGTCGCATGGAAAAGAATTCGCGGGGAACCG TTGCCCCCACACAGGTGGTCACTCGGCCGATGGGGACTTTGGGTAAACCTCGGGGCCCTGGCTTTCCTCATCCCG GAGTTCGTTTTCGTCATGTTCCCCCTTTACTCGACTGTGGACCCCGAAAACATGAACTGGAGCTCGCTCATGTAT GGTGGCATGTTGATTTTTTCCATCATCTACTATGTGTTGTATGGGCGGAAAACTTATGTGCCGCCCGTGGCCCTG GTCAAGCGCGAAATTTGA |
| Gene | >Ani_SJS100_1|g10002.t1 ATGCCGGATAATGTTGAACTCACAACCACCAAGGGTGGAAATAATATTTCCACTGTATTCGCTGATCAAGGGCTT GCCAAAGGTCATGTCGCCCAGAAGTATATCGGCACTATGGCCGACCAAAGGGATATGCAGGCTTTGGGAAAGGAA CAAGTTCTCAGGGTTCGTTATCTGCCAGCTCGGTAAAAAGTCTCTTTCTAATGGTCTCCTCAGAGAAATTTTAGG TTCATCTCAATTGTTGCCTTCGGATGTACCCTCATTGCTTCATGGGAAGTCGTGCTAACGTAAGTCATACGTTCT CCCTGGTTTGCCCTCGATATTAAGGTTGGGGCAGTATGATGAGTTCGCCTCTGGTTGATGGTGGCACGGCTGGAT TTATCTGGGGTTTCATCGTTGTTTCGGTTGGAGTGTTGCTGCTGTTCGCCAGTCTGGCGGAAATGGCTTCCATGT AAGTGCACGCACTTCATCCTAAAATTATACACCAGCTGATCGATTCATAGGGCACCCACTGCTGGTGGCCAATAC CATTGGGTATCAGAGTTTGCACCTAGGAAGTACCAGAAGTTCTTGAGTTATATCACTGGTAGGTGTTGCTTCCCG CTGAAAATTGGCTGAGCCTAATAAGCCCGGTCGCATCTAGGATGGCTCTGTGCCACAGGCTGGGAATGCGCGATT GTGTCAATTGCTTTCCTAGCAGGTACCATCATTCAAGGACTGGTTATCCTGAATTACCCTGATTATGTTTCTGAG CGGTGGCACGGTACTCTCATTACAATTGCCATCACCCTTTTCTCCGTTCTTTTCAACACTTTCCTAGCCAAGAAG CTCCCTCTCGTTGAAGCCTTCATCTTGATCCTCCACGTTGCCGGATTTTTCATTGTGATTATACCCCTTTGGGTG CTGGCACCCATCAAGGATGCGAAAACGGTTTTCACCCAGTTTACGAACGGTGGTGATTGGAATAGCAATGGTACC GCAACGATGGTCGGTCTGATTACTGCTATCACTGCCATGATTGGCTACGACTGTACTGTCCACATGTGTGAGTAA AAGCTCTGGCTCGATCATTTAGAAATGCTAATGCGGCACACAGCCGAGGAAGTTCGAGACGCTTCTACAACCCTT CCCAAGGCTATCATGGCAGCGTGCTCCCTAAACGGGGTCCTGGCCTTTGTTGTTATGGTCACTTTGTGTTTCACC TTGGGTAATGTAGATGAGGTCCTCGACTCCGCTACTGGTTACCCTTTCATTCAGGTCTTTTTCAATGCCACCAAA AGTTACGCAGCTACAAACGCAATGACTGCAATTGTCACCATGTCGCTTATTGCCAGTGTCATCACTGAGGTCGCC ACTGCGTCTCGTCAACTTTGGTCATTCGCCCGTGATGGGGGCGTCCCACTGGCTACCTTTTTCGGTCATGTAAGG GTTCCCACCTTTTATTTGATTTCAGCTCTACTATGCTAAATACTGATGCGCACGCAGGTCAACCCAAATTGGAAC ATCCCCCTCAATGCTGTTCTAGTGTCCCTCGTGCTCACGATGCTGCTATCGCTCATCAACATCGGCTCGACTGTC GCCCTAGACGCCTTGATCACCCTAACTGTCGGAGCATTGTTGAATTCCTACATCGTCACTGTTTCCTGTGTCGCA TGGAAAAGAATTCGCGGGGAACCGTTGCCCCCACACAGGTGGTCACTCGGCCGATGGGGACTTTGGGTAAACCTC GGGGCCCTGGCTTTCCTCATCCCGGAGTTCGTTTTCGTCATGTTCCCCCTTTACTCGACTGTGGACCCCGAAAAC ATGAACTGGAGCTCGCTCATGTATGGTGGCATGTTGATTTTTTCCATCATCTACTATGTGTTGTATGGGCGGAAA ACTTATGTGCCGCCCGTGGCCCTGGTCAAGCGCGAAATTTGA |