Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g10.t1
Gene name
Locationscaffold_001:27405..28647
Strand-
Gene length (bp)1242
Transcript length (bp)1242
Coding sequence length (bp)1242
Protein length (aa) 414

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07993 NAD_binding_4 Male sterility protein 9.6E-32 29 295
PF02719 Polysacc_synt_2 Polysaccharide biosynthesis protein 1.3E-06 27 159

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 38 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g10.t1
MPGPDLAPYQDEVKRIGYATSYERQTVLLTGSTGSLGGCTLYKLAVQLPTRKIFVLIRGSSELAVKKWKKTMPDH
TQAILNSNRIHYIVGDIRKSNFGIDDTMLNQLREEVTLVIHAAARIKLDASISEALENNCLPALELAAMVSRFRR
LRLFIQISTAYVNSFLPDGYVGERLYPISDDDPEDELATIQATGQSPYTDSFSSSYTHAKHLMERLTFKRYPTLP
VLFVRPTIFGPAVRHPYPLYGPEDSTPLTKFSTLYFSDQGGTQIWHAAEGYTSGRNILDEIPVDFVANACLLHAA
AGTQGIVQIGSQLYVSHTFDEILAICRENAPEEIRHELPKIIFVQDRNIPQHILAELVKVGTRNWVFDCGRSYWL
KQLGGPLSLAICQHDSDKLASARTKEAYEKVLRRMGKL*
Coding >Ani_SJS100_1|g10.t1
ATGCCAGGTCCGGACCTCGCGCCGTATCAGGATGAGGTTAAGAGGATCGGTTATGCAACATCCTACGAGAGACAG
ACCGTCCTCCTGACGGGCAGCACGGGCTCACTGGGAGGATGTACTCTGTATAAGCTGGCAGTGCAGCTTCCGACG
CGGAAGATATTTGTTTTGATCCGTGGGTCGTCGGAGTTGGCTGTGAAGAAATGGAAGAAAACCATGCCGGATCAT
ACTCAGGCGATTCTGAACTCGAACAGGATACATTACATAGTCGGGGATATTAGGAAGTCGAACTTTGGGATTGAT
GATACGATGCTGAACCAATTACGTGAAGAGGTGACGCTGGTTATACATGCAGCTGCGAGAATTAAGCTAGATGCG
AGCATCTCCGAAGCATTAGAGAACAACTGTCTGCCCGCCTTAGAACTGGCTGCGATGGTTTCGCGGTTTCGTCGA
CTCAGGCTGTTCATCCAGATCTCCACTGCTTATGTGAACAGCTTTTTGCCAGACGGTTATGTGGGTGAGCGACTG
TACCCCATTTCAGATGACGACCCAGAGGACGAATTGGCAACCATACAAGCAACTGGTCAATCTCCCTATACGGAT
TCCTTCTCTTCATCTTATACCCATGCAAAGCATCTTATGGAGCGCTTGACGTTCAAGCGGTACCCGACGCTCCCG
GTGTTGTTTGTCCGTCCGACCATCTTTGGACCGGCCGTCAGACACCCATATCCGCTGTACGGACCCGAAGATTCG
ACGCCCCTGACGAAGTTCTCTACACTATACTTTTCGGACCAGGGAGGTACCCAGATATGGCACGCCGCAGAAGGG
TATACAAGTGGTCGAAATATCTTGGATGAGATCCCAGTTGATTTTGTCGCCAATGCGTGCCTTCTGCATGCAGCG
GCGGGGACGCAGGGGATCGTTCAAATTGGATCTCAATTATATGTGAGCCATACGTTCGACGAGATCCTGGCTATA
TGCAGGGAGAACGCCCCGGAGGAGATTCGGCATGAATTACCAAAAATAATATTCGTGCAAGACCGAAATATCCCA
CAGCATATCTTGGCAGAGCTTGTCAAGGTGGGCACACGCAACTGGGTCTTTGATTGCGGGCGATCATACTGGCTG
AAGCAGCTCGGAGGTCCTCTAAGCTTAGCGATCTGTCAACATGATTCTGACAAGCTCGCCTCAGCACGGACGAAG
GAAGCTTATGAAAAGGTGCTGAGGAGGATGGGAAAGCTTTGA
Transcript >Ani_SJS100_1|g10.t1
ATGCCAGGTCCGGACCTCGCGCCGTATCAGGATGAGGTTAAGAGGATCGGTTATGCAACATCCTACGAGAGACAG
ACCGTCCTCCTGACGGGCAGCACGGGCTCACTGGGAGGATGTACTCTGTATAAGCTGGCAGTGCAGCTTCCGACG
CGGAAGATATTTGTTTTGATCCGTGGGTCGTCGGAGTTGGCTGTGAAGAAATGGAAGAAAACCATGCCGGATCAT
ACTCAGGCGATTCTGAACTCGAACAGGATACATTACATAGTCGGGGATATTAGGAAGTCGAACTTTGGGATTGAT
GATACGATGCTGAACCAATTACGTGAAGAGGTGACGCTGGTTATACATGCAGCTGCGAGAATTAAGCTAGATGCG
AGCATCTCCGAAGCATTAGAGAACAACTGTCTGCCCGCCTTAGAACTGGCTGCGATGGTTTCGCGGTTTCGTCGA
CTCAGGCTGTTCATCCAGATCTCCACTGCTTATGTGAACAGCTTTTTGCCAGACGGTTATGTGGGTGAGCGACTG
TACCCCATTTCAGATGACGACCCAGAGGACGAATTGGCAACCATACAAGCAACTGGTCAATCTCCCTATACGGAT
TCCTTCTCTTCATCTTATACCCATGCAAAGCATCTTATGGAGCGCTTGACGTTCAAGCGGTACCCGACGCTCCCG
GTGTTGTTTGTCCGTCCGACCATCTTTGGACCGGCCGTCAGACACCCATATCCGCTGTACGGACCCGAAGATTCG
ACGCCCCTGACGAAGTTCTCTACACTATACTTTTCGGACCAGGGAGGTACCCAGATATGGCACGCCGCAGAAGGG
TATACAAGTGGTCGAAATATCTTGGATGAGATCCCAGTTGATTTTGTCGCCAATGCGTGCCTTCTGCATGCAGCG
GCGGGGACGCAGGGGATCGTTCAAATTGGATCTCAATTATATGTGAGCCATACGTTCGACGAGATCCTGGCTATA
TGCAGGGAGAACGCCCCGGAGGAGATTCGGCATGAATTACCAAAAATAATATTCGTGCAAGACCGAAATATCCCA
CAGCATATCTTGGCAGAGCTTGTCAAGGTGGGCACACGCAACTGGGTCTTTGATTGCGGGCGATCATACTGGCTG
AAGCAGCTCGGAGGTCCTCTAAGCTTAGCGATCTGTCAACATGATTCTGACAAGCTCGCCTCAGCACGGACGAAG
GAAGCTTATGAAAAGGTGCTGAGGAGGATGGGAAAGCTTTGA
Gene >Ani_SJS100_1|g10.t1
ATGCCAGGTCCGGACCTCGCGCCGTATCAGGATGAGGTTAAGAGGATCGGTTATGCAACATCCTACGAGAGACAG
ACCGTCCTCCTGACGGGCAGCACGGGCTCACTGGGAGGATGTACTCTGTATAAGCTGGCAGTGCAGCTTCCGACG
CGGAAGATATTTGTTTTGATCCGTGGGTCGTCGGAGTTGGCTGTGAAGAAATGGAAGAAAACCATGCCGGATCAT
ACTCAGGCGATTCTGAACTCGAACAGGATACATTACATAGTCGGGGATATTAGGAAGTCGAACTTTGGGATTGAT
GATACGATGCTGAACCAATTACGTGAAGAGGTGACGCTGGTTATACATGCAGCTGCGAGAATTAAGCTAGATGCG
AGCATCTCCGAAGCATTAGAGAACAACTGTCTGCCCGCCTTAGAACTGGCTGCGATGGTTTCGCGGTTTCGTCGA
CTCAGGCTGTTCATCCAGATCTCCACTGCTTATGTGAACAGCTTTTTGCCAGACGGTTATGTGGGTGAGCGACTG
TACCCCATTTCAGATGACGACCCAGAGGACGAATTGGCAACCATACAAGCAACTGGTCAATCTCCCTATACGGAT
TCCTTCTCTTCATCTTATACCCATGCAAAGCATCTTATGGAGCGCTTGACGTTCAAGCGGTACCCGACGCTCCCG
GTGTTGTTTGTCCGTCCGACCATCTTTGGACCGGCCGTCAGACACCCATATCCGCTGTACGGACCCGAAGATTCG
ACGCCCCTGACGAAGTTCTCTACACTATACTTTTCGGACCAGGGAGGTACCCAGATATGGCACGCCGCAGAAGGG
TATACAAGTGGTCGAAATATCTTGGATGAGATCCCAGTTGATTTTGTCGCCAATGCGTGCCTTCTGCATGCAGCG
GCGGGGACGCAGGGGATCGTTCAAATTGGATCTCAATTATATGTGAGCCATACGTTCGACGAGATCCTGGCTATA
TGCAGGGAGAACGCCCCGGAGGAGATTCGGCATGAATTACCAAAAATAATATTCGTGCAAGACCGAAATATCCCA
CAGCATATCTTGGCAGAGCTTGTCAAGGTGGGCACACGCAACTGGGTCTTTGATTGCGGGCGATCATACTGGCTG
AAGCAGCTCGGAGGTCCTCTAAGCTTAGCGATCTGTCAACATGATTCTGACAAGCTCGCCTCAGCACGGACGAAG
GAAGCTTATGAAAAGGTGCTGAGGAGGATGGGAAAGCTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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