Fungal Genomics

at Utrecht University

PFAM Domain


General information

PFAM domainPF04997
Short nameRNA_pol_Rpb1_1
Long nameRNA polymerase Rpb1, domain 1
Proteins with at least one of this domain3
Total domain count3
More informationPFAM website

Proteins with this PFAM domain

Note: all PFAM domains are shown for these proteins
Short name Long name E-value Start End Name
protein ID PFAM
Ani_SJS100_1|g10117.t1 PF04997 RNA_pol_Rpb1_1 RNA polymerase Rpb1, domain 1 1.4E-113 14 354
PF00623 RNA_pol_Rpb1_2 RNA polymerase Rpb1, domain 2 1.1E-76 356 521
PF04983 RNA_pol_Rpb1_3 RNA polymerase Rpb1, domain 3 9.8E-48 524 688
PF05000 RNA_pol_Rpb1_4 RNA polymerase Rpb1, domain 4 1.6E-36 715 819
PF04998 RNA_pol_Rpb1_5 RNA polymerase Rpb1, domain 5 8.6E-104 826 1420
PF04992 RNA_pol_Rpb1_6 RNA polymerase Rpb1, domain 6 1.8E-65 892 1075
PF04990 RNA_pol_Rpb1_7 RNA polymerase Rpb1, domain 7 6.7E-46 1160 1293
PF05001 RNA_pol_Rpb1_R RNA polymerase Rpb1 C-terminal repeat 6.2E-01 1573 1583
PF05001 RNA_pol_Rpb1_R RNA polymerase Rpb1 C-terminal repeat 3.9E-02 1586 1599
PF05001 RNA_pol_Rpb1_R RNA polymerase Rpb1 C-terminal repeat 5.8E+00 1602 1613
PF05001 RNA_pol_Rpb1_R RNA polymerase Rpb1 C-terminal repeat 8.2E-02 1615 1627
PF05001 RNA_pol_Rpb1_R RNA polymerase Rpb1 C-terminal repeat 6.8E-02 1631 1644
PF05001 RNA_pol_Rpb1_R RNA polymerase Rpb1 C-terminal repeat 9.8E-02 1645 1658
PF05001 RNA_pol_Rpb1_R RNA polymerase Rpb1 C-terminal repeat 3.9E-01 1659 1672
PF05001 RNA_pol_Rpb1_R RNA polymerase Rpb1 C-terminal repeat 2.4E-03 1673 1692
PF05001 RNA_pol_Rpb1_R RNA polymerase Rpb1 C-terminal repeat 1.4E-01 1690 1702
PF05001 RNA_pol_Rpb1_R RNA polymerase Rpb1 C-terminal repeat 2.7E+00 1704 1718
PF05001 RNA_pol_Rpb1_R RNA polymerase Rpb1 C-terminal repeat 2.8E+00 1728 1740
PF05001 RNA_pol_Rpb1_R RNA polymerase Rpb1 C-terminal repeat 1.3E-01 1734 1745
Ani_SJS100_1|g354.t1 PF04997 RNA_pol_Rpb1_1 RNA polymerase Rpb1, domain 1 3.2E-22 11 481
PF00623 RNA_pol_Rpb1_2 RNA polymerase Rpb1, domain 2 2.7E-67 483 661
PF04983 RNA_pol_Rpb1_3 RNA polymerase Rpb1, domain 3 2.0E-34 666 843
PF05000 RNA_pol_Rpb1_4 RNA polymerase Rpb1, domain 4 4.8E-16 904 993
PF04998 RNA_pol_Rpb1_5 RNA polymerase Rpb1, domain 5 3.4E-87 1000 1625
Ani_SJS100_1|g652.t1 PF04997 RNA_pol_Rpb1_1 RNA polymerase Rpb1, domain 1 1.3E-84 22 370
PF00623 RNA_pol_Rpb1_2 RNA polymerase Rpb1, domain 2 6.3E-71 372 539
PF04983 RNA_pol_Rpb1_3 RNA polymerase Rpb1, domain 3 5.5E-34 542 718
PF05000 RNA_pol_Rpb1_4 RNA polymerase Rpb1, domain 4 8.4E-27 746 849
PF04998 RNA_pol_Rpb1_5 RNA polymerase Rpb1, domain 5 4.5E-79 856 1361

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