Fungal Genomics

at Utrecht University

PFAM Domain


General information

PFAM domainPF00562
Short nameRNA_pol_Rpb2_6
Long nameRNA polymerase Rpb2, domain 6
Proteins with at least one of this domain3
Total domain count3
More informationPFAM website

Proteins with this PFAM domain

Note: all PFAM domains are shown for these proteins
Short name Long name E-value Start End Name
protein ID PFAM
Ani_SJS100_1|g3086.t1 PF00083 Sugar_tr Sugar (and other) transporter 9.9E-18 16 137
PF07690 MFS_1 Major Facilitator Superfamily 2.4E-11 18 121
PF04563 RNA_pol_Rpb2_1 RNA polymerase beta subunit 1.9E-54 237 624
PF04561 RNA_pol_Rpb2_2 RNA polymerase Rpb2, domain 2 4.5E-27 391 571
PF04565 RNA_pol_Rpb2_3 RNA polymerase Rpb2, domain 3 2.7E-18 650 713
PF04566 RNA_pol_Rpb2_4 RNA polymerase Rpb2, domain 4 1.2E-22 752 811
PF04567 RNA_pol_Rpb2_5 RNA polymerase Rpb2, domain 5 1.7E-08 832 869
PF00562 RNA_pol_Rpb2_6 RNA polymerase Rpb2, domain 6 1.1E-121 879 1251
PF04560 RNA_pol_Rpb2_7 RNA polymerase Rpb2, domain 7 9.6E-33 1253 1337
Ani_SJS100_1|g4010.t1 PF04563 RNA_pol_Rpb2_1 RNA polymerase beta subunit 1.7E-60 37 474
PF04561 RNA_pol_Rpb2_2 RNA polymerase Rpb2, domain 2 7.9E-46 286 427
PF04565 RNA_pol_Rpb2_3 RNA polymerase Rpb2, domain 3 1.4E-25 501 565
PF04566 RNA_pol_Rpb2_4 RNA polymerase Rpb2, domain 4 1.5E-24 600 661
PF04567 RNA_pol_Rpb2_5 RNA polymerase Rpb2, domain 5 7.9E-23 704 775
PF00562 RNA_pol_Rpb2_6 RNA polymerase Rpb2, domain 6 4.4E-124 782 1154
PF04560 RNA_pol_Rpb2_7 RNA polymerase Rpb2, domain 7 5.4E-33 1156 1248
Ani_SJS100_1|g8975.t1 PF04563 RNA_pol_Rpb2_1 RNA polymerase beta subunit 7.5E-40 40 436
PF04561 RNA_pol_Rpb2_2 RNA polymerase Rpb2, domain 2 4.1E-25 236 410
PF04565 RNA_pol_Rpb2_3 RNA polymerase Rpb2, domain 3 1.1E-27 499 562
PF06883 RNA_pol_Rpa2_4 RNA polymerase I, Rpa2 specific domain 2.0E-26 603 660
PF00562 RNA_pol_Rpb2_6 RNA polymerase Rpb2, domain 6 1.2E-114 709 1089
PF04560 RNA_pol_Rpb2_7 RNA polymerase Rpb2, domain 7 1.5E-15 1091 1138

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