Fungal Genomics

at Utrecht University

PFAM Domain

General information

PFAM domainPF00078
Short nameRVT_1
Long nameReverse transcriptase (RNA-dependent DNA polymerase)
Proteins with at least one of this domain35
Total domain count35
More informationPFAM website

Proteins with this PFAM domain

Note: all PFAM domains are shown for these proteins
Short name Long name E-value Start End Name
protein ID PFAM
Ani_SJS100_1|g10524.t1 PF14529 Exo_endo_phos_2 Endonuclease-reverse transcriptase 1.4E-24 14 123
PF03372 Exo_endo_phos Endonuclease/Exonuclease/phosphatase family 3.9E-06 23 120
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 6.4E-32 404 655
Ani_SJS100_1|g10534.t1 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.6E-12 76 206
Ani_SJS100_1|g11034.t1 PF14529 Exo_endo_phos_2 Endonuclease-reverse transcriptase 3.7E-19 110 241
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.8E-35 490 741
Ani_SJS100_1|g11049.t1 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.0E-13 273 374
Ani_SJS100_1|g11131.t1 PF14529 Exo_endo_phos_2 Endonuclease-reverse transcriptase 8.1E-18 86 207
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 7.6E-37 484 738
Ani_SJS100_1|g11201.t1 PF14529 Exo_endo_phos_2 Endonuclease-reverse transcriptase 7.1E-23 32 163
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.3E-35 438 688
Ani_SJS100_1|g11262.t1 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.4E-30 28 279
PF00075 RNase_H RNase H 1.9E-12 480 622
Ani_SJS100_1|g11279.t1 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 5.6E-12 26 119
Ani_SJS100_1|g11283.t1 PF14529 Exo_endo_phos_2 Endonuclease-reverse transcriptase 8.8E-23 437 570
PF03372 Exo_endo_phos Endonuclease/Exonuclease/phosphatase family 2.3E-07 456 567
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.3E-34 822 1076
Ani_SJS100_1|g11439.t1 PF03372 Exo_endo_phos Endonuclease/Exonuclease/phosphatase family 1.1E-07 186 398
PF14529 Exo_endo_phos_2 Endonuclease-reverse transcriptase 3.9E-21 283 401
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.2E-37 681 932
PF00075 RNase_H RNase H 2.8E-12 1135 1273
PF13456 RVT_3 Reverse transcriptase-like 3.7E-05 1145 1273
Ani_SJS100_1|g11440.t1 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.8E-29 33 195
Ani_SJS100_1|g11473.t1 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 5.8E-29 170 425
PF00075 RNase_H RNase H 7.7E-11 627 769
Ani_SJS100_1|g11490.t1 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.4E-27 3 207
PF00075 RNase_H RNase H 8.2E-08 425 552
PF13456 RVT_3 Reverse transcriptase-like 6.9E-05 459 551
Ani_SJS100_1|g11593.t1 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.0E-11 164 254
Ani_SJS100_1|g11617.t1 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 8.3E-08 5 101
PF00075 RNase_H RNase H 1.7E-09 404 547
Ani_SJS100_1|g11667.t1 PF14529 Exo_endo_phos_2 Endonuclease-reverse transcriptase 2.0E-07 23 77
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.7E-13 357 454
PF00075 RNase_H RNase H 2.5E-09 762 905
Ani_SJS100_1|g11691.t1 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 5.0E-30 664 917
PF00075 RNase_H RNase H 2.0E-09 1118 1261
Ani_SJS100_1|g11704.t1 PF00098 zf-CCHC Zinc knuckle 2.0E-04 382 398
PF14529 Exo_endo_phos_2 Endonuclease-reverse transcriptase 3.6E-23 530 661
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.2E-36 936 1186
Ani_SJS100_1|g11728.t1 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.7E-32 302 553
PF00075 RNase_H RNase H 2.4E-10 755 898
Ani_SJS100_1|g11741.t1 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.8E-32 327 582
PF00075 RNase_H RNase H 2.1E-10 784 926
Ani_SJS100_1|g11744.t1 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 9.1E-30 89 338
Ani_SJS100_1|g11753.t1 PF14529 Exo_endo_phos_2 Endonuclease-reverse transcriptase 1.2E-28 104 237
PF03372 Exo_endo_phos Endonuclease/Exonuclease/phosphatase family 6.6E-06 125 234
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.5E-33 520 771
Ani_SJS100_1|g11764.t1 PF14529 Exo_endo_phos_2 Endonuclease-reverse transcriptase 2.4E-23 322 453
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.3E-36 728 978
Ani_SJS100_1|g11782.t1 PF03372 Exo_endo_phos Endonuclease/Exonuclease/phosphatase family 7.6E-07 378 574
PF14529 Exo_endo_phos_2 Endonuclease-reverse transcriptase 3.0E-26 471 577
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 6.1E-33 840 1091
Ani_SJS100_1|g11800.t1 PF14529 Exo_endo_phos_2 Endonuclease-reverse transcriptase 7.8E-24 107 238
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 8.0E-37 513 763
Ani_SJS100_1|g11801.t1 PF14529 Exo_endo_phos_2 Endonuclease-reverse transcriptase 1.6E-26 13 146
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.9E-35 310 559
Ani_SJS100_1|g11828.t1 PF14529 Exo_endo_phos_2 Endonuclease-reverse transcriptase 3.5E-26 105 239
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.7E-20 526 739
Ani_SJS100_1|g11829.t1 PF14529 Exo_endo_phos_2 Endonuclease-reverse transcriptase 2.2E-27 13 123
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.2E-32 362 612
Ani_SJS100_1|g11848.t1 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.9E-16 96 203
Ani_SJS100_1|g11849.t1 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 6.0E-09 2 136
PF00075 RNase_H RNase H 2.7E-09 339 482
Ani_SJS100_1|g11869.t1 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 5.9E-21 66 224
Ani_SJS100_1|g11873.t1 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.6E-29 50 294
Ani_SJS100_1|g11909.t1 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.4E-12 93 213
Ani_SJS100_1|g4616.t1 PF12009 Telomerase_RBD Telomerase ribonucleoprotein complex - RNA binding domain 7.4E-46 504 644
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 5.9E-08 890 972
Ani_SJS100_1|g8637.t1 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 5.6E-39 98 353
PF00075 RNase_H RNase H 1.3E-10 568 697

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