Protein ID | AgabiH97|119480 |
Gene name | |
Location | scaffold_9:1541190..1543458 |
Strand | - |
Gene length (bp) | 2268 |
Transcript length (bp) | 1998 |
Coding sequence length (bp) | 1998 |
Protein length (aa) | 666 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF05187 | ETF_QO | Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S | 1.8E-05 | 507 | 555 |
PF05187 | ETF_QO | Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S | 2.6E-27 | 585 | 663 |
PF13450 | NAD_binding_8 | NAD(P)-binding Rossmann-like domain | 6.8E-07 | 45 | 90 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|P87111|ETFD_SCHPO | Probable electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC20G8.04c PE=3 SV=1 | 16 | 665 | 0.0E+00 |
sp|Q08822|ETFD_YEAST | Probable electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CIR2 PE=1 SV=1 | 36 | 665 | 0.0E+00 |
sp|Q2KIG0|ETFD_BOVIN | Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Bos taurus GN=ETFDH PE=2 SV=1 | 20 | 662 | 1.0E-178 |
sp|Q16134|ETFD_HUMAN | Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Homo sapiens GN=ETFDH PE=1 SV=2 | 20 | 662 | 1.0E-176 |
sp|Q6UPE1|ETFD_RAT | Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Rattus norvegicus GN=Etfdh PE=1 SV=1 | 23 | 662 | 1.0E-176 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|P87111|ETFD_SCHPO | Probable electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC20G8.04c PE=3 SV=1 | 16 | 665 | 0.0E+00 |
sp|Q08822|ETFD_YEAST | Probable electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CIR2 PE=1 SV=1 | 36 | 665 | 0.0E+00 |
sp|Q2KIG0|ETFD_BOVIN | Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Bos taurus GN=ETFDH PE=2 SV=1 | 20 | 662 | 1.0E-178 |
sp|Q16134|ETFD_HUMAN | Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Homo sapiens GN=ETFDH PE=1 SV=2 | 20 | 662 | 1.0E-176 |
sp|Q6UPE1|ETFD_RAT | Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Rattus norvegicus GN=Etfdh PE=1 SV=1 | 23 | 662 | 1.0E-176 |
sp|Q921G7|ETFD_MOUSE | Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Mus musculus GN=Etfdh PE=1 SV=1 | 20 | 662 | 2.0E-176 |
sp|Q5RDD3|ETFD_PONAB | Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Pongo abelii GN=ETFDH PE=2 SV=1 | 20 | 662 | 1.0E-175 |
sp|P55931|ETFD_PIG | Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Sus scrofa GN=ETFDH PE=1 SV=2 | 7 | 662 | 5.0E-175 |
sp|Q11190|ETFD_CAEEL | Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Caenorhabditis elegans GN=let-721 PE=3 SV=2 | 19 | 662 | 4.0E-170 |
sp|Q54XM6|ETFD_DICDI | Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Dictyostelium discoideum GN=etfdh PE=3 SV=1 | 36 | 662 | 3.0E-167 |
sp|O22854|ETFQO_ARATH | Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Arabidopsis thaliana GN=ETFQO PE=2 SV=1 | 34 | 663 | 6.0E-165 |
sp|Q337B8|ETFQO_ORYSJ | Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Oryza sativa subsp. japonica GN=Os10g0516300 PE=3 SV=1 | 42 | 663 | 1.0E-155 |
sp|Q9HZP5|ETFD_PSEAE | Electron transfer flavoprotein-ubiquinone oxidoreductase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=PA2953 PE=1 SV=1 | 35 | 664 | 1.0E-148 |
sp|P94132|ETFD_ACIAD | Probable electron transfer flavoprotein-ubiquinone oxidoreductase OS=Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1) GN=etfD PE=3 SV=1 | 32 | 664 | 2.0E-135 |
sp|P26484|FIXC_AZOC5 | Protein FixC OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 / NBRC 14845 / NCIMB 13405 / ORS 571) GN=fixC PE=3 SV=2 | 38 | 437 | 1.0E-23 |
sp|P77337|YDIS_ECOLI | Probable electron transfer flavoprotein-quinone oxidoreductase YdiS OS=Escherichia coli (strain K12) GN=ydiS PE=3 SV=1 | 37 | 437 | 2.0E-22 |
sp|Q53208|FIXC_RHISN | Protein FixC OS=Rhizobium sp. (strain NGR234) GN=fixC PE=3 SV=1 | 38 | 437 | 1.0E-18 |
sp|Q8Z9K9|FIXC_SALTI | Protein FixC OS=Salmonella typhi GN=fixC PE=3 SV=1 | 37 | 409 | 2.0E-15 |
sp|Q8ZRW9|FIXC_SALTY | Protein FixC OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=fixC PE=3 SV=1 | 37 | 409 | 2.0E-15 |
sp|P10331|FIXC_BRADU | Protein FixC OS=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) GN=fixC PE=3 SV=2 | 70 | 443 | 2.0E-15 |
sp|P09820|FIXC_RHIME | Protein FixC OS=Rhizobium meliloti (strain 1021) GN=fixC PE=3 SV=1 | 38 | 441 | 2.0E-14 |
sp|Q7AHT0|FIXC_ECO57 | Protein FixC OS=Escherichia coli O157:H7 GN=fixC PE=3 SV=1 | 37 | 373 | 1.0E-13 |
sp|P53572|FIXC_AZOVI | Protein FixC OS=Azotobacter vinelandii GN=fixC PE=3 SV=1 | 70 | 442 | 2.0E-13 |
sp|Q83SQ7|FIXC_SHIFL | Protein FixC OS=Shigella flexneri GN=fixC PE=3 SV=1 | 37 | 373 | 2.0E-13 |
sp|P68644|FIXC_ECOLI | Protein FixC OS=Escherichia coli (strain K12) GN=fixC PE=3 SV=1 | 37 | 373 | 3.0E-13 |
sp|P68645|FIXC_ECOL6 | Protein FixC OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=fixC PE=3 SV=1 | 37 | 373 | 3.0E-13 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 35 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >AgabiH97|119480 MLRRGLLRPAKWSRNRRIQTSVPRLADAFDPVTAERAEDEVDVCIVGGGPAGLSAAIRLKQLEKETGKEIRVVVL EKGSEVGAHIVSGAVIEPRALDELLPKWQTMEGHPLTRPATSSHMRFLTKNLSLPFPHPPQMNNDGNYILSLSQF TRWLANIAENEYGVEIYPGFAGSQLLLSPTADAHDPWGNKVRSVQGVITNEVGLARNFTMKSSFEPGMAFRAKVT LLGEGAHGSLSKQAISMYQLRKEAQPQTYGIGLKEVWRVDPENYQPGLVNHFLGWPLAYDVYGGGFEYHMDDGLV TLGIVIGLDYKNPYLNPYRELQRLKHHPHFRKLLSGKSERLSYAARVLNEGGLQSVPRLHFPGGALIGCSAGFVN VAKIKGTHNAMKTGMLAAESAFTTVHPTESSQASEAAADLSSYETAYKKSWVHEDLHEVRNLRPSFNTKLGIWGG IMYSGVDSLFLKGSVPWNFRHSSTHITEESTSSLDAAETNPASWHQPIDYPAFEPPLSTDLMTSVALTGTNHAED QPIHLRVVKTLEYMNQLDQIRAHNEKANPAIGAGSKAVETCSKDGDSGKVEEEKRVRCDHVRKNVGEYAGLLGRA CPAGVYEYVDQEGAEVGNGEGWQGKKLVINSQNCIHCKLCDVKVPSQDITWTVPEGGGGPKYTNT* |
Coding | >AgabiH97|119480 ATGTTACGTCGGGGCCTGCTGAGGCCTGCCAAATGGTCGCGGAACCGTCGAATACAAACATCTGTGCCACGACTG GCAGATGCGTTTGATCCGGTCACTGCGGAACGCGCCGAGGACGAAGTGGATGTCTGCATCGTCGGAGGAGGCCCG GCTGGGCTCAGCGCTGCAATCCGCCTCAAGCAGTTGGAGAAGGAGACTGGCAAAGAAATCCGCGTGGTCGTCCTC GAAAAGGGTTCCGAAGTCGGTGCACATATTGTATCTGGAGCCGTCATTGAGCCTCGGGCACTCGATGAGCTCTTG CCAAAATGGCAGACTATGGAAGGCCATCCTCTCACAAGACCGGCAACATCATCGCATATGCGTTTCCTCACTAAG AACCTCTCTCTCCCTTTTCCTCATCCGCCACAAATGAACAACGACGGAAATTATATCTTATCCCTGTCTCAATTC ACCCGTTGGCTAGCCAATATCGCAGAAAACGAGTATGGAGTCGAAATTTATCCAGGTTTTGCGGGGTCTCAATTG CTTTTGAGCCCTACGGCCGACGCACACGATCCCTGGGGAAACAAAGTTCGCAGCGTCCAAGGTGTCATTACAAAC GAGGTCGGCCTCGCGCGCAACTTCACGATGAAATCCTCGTTCGAGCCCGGTATGGCTTTCCGAGCCAAGGTCACG CTCCTTGGTGAAGGGGCTCATGGTTCACTATCGAAACAGGCCATAAGCATGTACCAACTGCGAAAGGAAGCTCAG CCTCAGACCTACGGTATCGGTCTCAAAGAAGTTTGGCGCGTTGATCCGGAGAATTATCAGCCCGGTCTAGTGAAC CATTTCTTGGGTTGGCCCCTTGCATATGACGTTTATGGTGGCGGTTTCGAGTACCACATGGATGACGGTTTGGTC ACTCTTGGTATAGTTATTGGGCTGGACTACAAGAACCCCTATTTGAACCCGTATCGTGAGCTTCAGCGACTTAAA CATCATCCTCACTTCCGCAAACTTCTCTCTGGAAAATCAGAACGACTCTCCTACGCCGCACGCGTTCTCAACGAA GGAGGTCTACAATCCGTTCCTCGATTACACTTCCCTGGAGGCGCTCTTATCGGTTGCTCCGCTGGTTTCGTCAAT GTAGCGAAAATCAAGGGCACACATAATGCAATGAAAACCGGAATGCTCGCGGCGGAATCCGCGTTCACCACCGTT CATCCAACAGAAAGCTCACAAGCCTCCGAAGCAGCCGCTGATTTGTCTTCATACGAAACAGCTTACAAAAAGTCT TGGGTTCACGAGGATCTCCATGAAGTACGTAACTTGCGACCGTCTTTCAACACGAAACTTGGTATCTGGGGTGGG ATAATGTACTCTGGTGTGGACTCTCTATTCCTAAAGGGTAGCGTCCCTTGGAATTTCCGCCACTCTTCCACTCAT ATCACTGAGGAAAGTACATCTTCACTCGATGCGGCAGAAACAAATCCAGCATCTTGGCATCAACCAATCGACTAC CCAGCCTTTGAACCTCCTCTTTCGACCGATCTCATGACCAGCGTCGCGCTCACAGGTACCAACCATGCTGAAGAC CAACCAATCCATCTCCGCGTAGTCAAGACCCTCGAATACATGAACCAGCTCGATCAAATCCGTGCTCACAATGAA AAAGCTAACCCGGCAATCGGTGCTGGCTCGAAAGCCGTTGAAACCTGCTCGAAAGATGGTGATTCAGGAAAAGTA GAAGAGGAAAAAAGGGTGAGGTGTGATCATGTCAGAAAGAATGTTGGTGAATACGCTGGGTTACTCGGGCGAGCA TGTCCCGCCGGTGTTTATGAGTACGTTGATCAAGAAGGTGCGGAAGTAGGTAATGGAGAAGGATGGCAAGGGAAA AAACTGGTGATTAATTCTCAGAATTGCATTCACTGCAAGTTGTGCGATGTCAAAGTACCCTCGCAGGACATCACT TGGACTGTCCCGGAGGGTGGAGGAGGTCCTAAGTATACTAACACCTAG |
Transcript | >AgabiH97|119480 ATGTTACGTCGGGGCCTGCTGAGGCCTGCCAAATGGTCGCGGAACCGTCGAATACAAACATCTGTGCCACGACTG GCAGATGCGTTTGATCCGGTCACTGCGGAACGCGCCGAGGACGAAGTGGATGTCTGCATCGTCGGAGGAGGCCCG GCTGGGCTCAGCGCTGCAATCCGCCTCAAGCAGTTGGAGAAGGAGACTGGCAAAGAAATCCGCGTGGTCGTCCTC GAAAAGGGTTCCGAAGTCGGTGCACATATTGTATCTGGAGCCGTCATTGAGCCTCGGGCACTCGATGAGCTCTTG CCAAAATGGCAGACTATGGAAGGCCATCCTCTCACAAGACCGGCAACATCATCGCATATGCGTTTCCTCACTAAG AACCTCTCTCTCCCTTTTCCTCATCCGCCACAAATGAACAACGACGGAAATTATATCTTATCCCTGTCTCAATTC ACCCGTTGGCTAGCCAATATCGCAGAAAACGAGTATGGAGTCGAAATTTATCCAGGTTTTGCGGGGTCTCAATTG CTTTTGAGCCCTACGGCCGACGCACACGATCCCTGGGGAAACAAAGTTCGCAGCGTCCAAGGTGTCATTACAAAC GAGGTCGGCCTCGCGCGCAACTTCACGATGAAATCCTCGTTCGAGCCCGGTATGGCTTTCCGAGCCAAGGTCACG CTCCTTGGTGAAGGGGCTCATGGTTCACTATCGAAACAGGCCATAAGCATGTACCAACTGCGAAAGGAAGCTCAG CCTCAGACCTACGGTATCGGTCTCAAAGAAGTTTGGCGCGTTGATCCGGAGAATTATCAGCCCGGTCTAGTGAAC CATTTCTTGGGTTGGCCCCTTGCATATGACGTTTATGGTGGCGGTTTCGAGTACCACATGGATGACGGTTTGGTC ACTCTTGGTATAGTTATTGGGCTGGACTACAAGAACCCCTATTTGAACCCGTATCGTGAGCTTCAGCGACTTAAA CATCATCCTCACTTCCGCAAACTTCTCTCTGGAAAATCAGAACGACTCTCCTACGCCGCACGCGTTCTCAACGAA GGAGGTCTACAATCCGTTCCTCGATTACACTTCCCTGGAGGCGCTCTTATCGGTTGCTCCGCTGGTTTCGTCAAT GTAGCGAAAATCAAGGGCACACATAATGCAATGAAAACCGGAATGCTCGCGGCGGAATCCGCGTTCACCACCGTT CATCCAACAGAAAGCTCACAAGCCTCCGAAGCAGCCGCTGATTTGTCTTCATACGAAACAGCTTACAAAAAGTCT TGGGTTCACGAGGATCTCCATGAAGTACGTAACTTGCGACCGTCTTTCAACACGAAACTTGGTATCTGGGGTGGG ATAATGTACTCTGGTGTGGACTCTCTATTCCTAAAGGGTAGCGTCCCTTGGAATTTCCGCCACTCTTCCACTCAT ATCACTGAGGAAAGTACATCTTCACTCGATGCGGCAGAAACAAATCCAGCATCTTGGCATCAACCAATCGACTAC CCAGCCTTTGAACCTCCTCTTTCGACCGATCTCATGACCAGCGTCGCGCTCACAGGTACCAACCATGCTGAAGAC CAACCAATCCATCTCCGCGTAGTCAAGACCCTCGAATACATGAACCAGCTCGATCAAATCCGTGCTCACAATGAA AAAGCTAACCCGGCAATCGGTGCTGGCTCGAAAGCCGTTGAAACCTGCTCGAAAGATGGTGATTCAGGAAAAGTA GAAGAGGAAAAAAGGGTGAGGTGTGATCATGTCAGAAAGAATGTTGGTGAATACGCTGGGTTACTCGGGCGAGCA TGTCCCGCCGGTGTTTATGAGTACGTTGATCAAGAAGGTGCGGAAGTAGGTAATGGAGAAGGATGGCAAGGGAAA AAACTGGTGATTAATTCTCAGAATTGCATTCACTGCAAGTTGTGCGATGTCAAAGTACCCTCGCAGGACATCACT TGGACTGTCCCGGAGGGTGGAGGAGGTCCTAAGTATACTAACACCTAG |
Gene | >AgabiH97|119480 ATGTTACGTCGGGGCCTGCTGAGGCCTGCCAAATGGTCGCGGAACCGTCGAATACAAACATCTGTGCCACGACTG GCAGATGCGTTTGATCCGGTCACTGCGGAACGCGCCGAGGACGAAGTGGATGTCTGCATCGTCGGAGGAGGCCCG GCTGGGCTCAGCGCTGCAATCCGCCTCAAGCAGTTGGAGAAGGAGACTGGCAAAGAAATCCGCGTGGTCGTCCTC GAAAAGGGTTCCGAAGTCGGTGAGTGTTCTTAAGTTCCCTCTCGAAAAGCTTGCCAAATCCTGGTAGGTGCACAT ATTGTATCTGGAGCCGTCATTGAGCCTCGGGCACTCGATGAGCTCTTGCCAAAATGGCAGACTATGGAAGGCCAT CCTCTCACAAGACCGGCAACATCATCGCATATGCGTTTCCTCACTAAGAACCTCTCTCTCCCTTTTCCTCATCCG CCACAAATGAACAACGACGGAAATTATATCTTATCCCTGTCTCAATTCACCCGTTGGCTAGCCAATATCGCAGAA AACGAGTATGGAGTCGAAATTTATCCAGGTTTTGCGGGGTCTCAATTGCTTTTGAGCCCTACGGCCGACGCACAC GATCCCTGGGGAAACAAAGTTCGCAGCGTCCAAGGTGTCATTACAAACGAGGTCGGCCTCGCGCGCAACTTCACG ATGAAATCCTCGTTCGAGCCCGGTATGGCTTTCCGAGCCAAGGTCACGCTCCTTGGTGAAGGGGCTCATGGTTCA CTATCGAAACAGGCCATAAGCATGTACCAACTGCGAAAGGAAGCTCAGCCTCAGACCTACGGTATCGGTCTCAAA GAAGTTTGGCGCGTTGATCCGGAGAATTATCAGCCCGGTCTAGTGAACCATTTCTTGGGTTGGCCCCTTGCATAT GACGTTTATGGTGGCGGTTTCGAGTACCACATGGATGACGGTTTGGTCACTCTTGGTATAGTTATTGGGCTGGAC TACAAGAACCCCTATTTGAACCCGTATCGTGAGCTTCAGGTGCGTATCTCCTTTATGATTAGATACAACAAAACT TCATTTTGGCCCAGCGACTTAAACATCATCCTCACTTCCGCAAACTTCTCTCTGGAAAATCAGAACGACTCTCCT ACGCCGCACGCGTTCTCAACGAAGGAGGTCTACAATCCGTTCCTCGATTACACTTCCCTGGAGGCGCTCTTATCG GTTGCTCCGCTGGTTTCGTCAATGTAGCGAAAATCAAGGGCACACATAATGCAATGAAAACCGGAATGCTCGCGG CGGAATCCGCGTTCACCACCGTTCATCCAACAGAAAGCTCACAAGCCTCCGAAGCAGCCGCTGATTTGTCTTCAT ACGAAACAGCTTACAAAAAGTCTTGGGTTCACGAGGATCTCCATGAAGTACGTAACTTGCGACCGTCTTTCAACA CGAAACTTGGTATCTGGGGTGGGATAATGTACTCTGGTGTGGACTCTCTATTCCTAAAGGGTAGCGTCCCTTGGA ATTTCCGCCACTCTTCCACTCATATCACTGAGGTCGGTGATGAGCTTGACTCTCTGCCGTCGTCTTTAAACTCAG GCTTTTTGACAGGAAAGTACATCTTCACTCGATGCGGCAGAAACAAATCCAGCATCTTGGCATCAACCAATCGAC TACCCAGCCTTTGAACCTCCTCTTTCGACCGATCTCATGACCAGCGTCGCGCTCACAGGTACCAACCATGCTGAA GACCAACCAATCCATCTCCGCGTAGTCAAGACCCTCGAATACATGAACCAGCTCGATCAAATCCGTGCTCACAAT GAAAAAGCTAACCCGGCAATCGGTGCTGGCTCGAAAGCCGTTGAAACCTGCTCGAAAGATGGTGATTCAGGAAAA GTAGAAGAGGAAAAAAGGGTGAGGTGTGATCATGTCAGAAAGAATGTTGGTGAATACGCTGGGTTACTCGGGCGA GCATGTCCCGCCGGTGTTTATGAGTACGTTGATCAAGAAGGTGCGGAAGTAGGTAATGGAGAAGGATGGCAAGGG AAAAAACTGGTGATTAATTCTCAGGTGTGTACGTTTCAGACCTCTTCGCTTTCTCTCCGTTGAACATCGTGGGTT ATGTCTAGAATTGCATTCACTGCAAGTTGTGCGATGTCAAAGTACCCTCGCAGGACATCACTTGGACTGTCCCGG AGGGTGGAGGAGGTCCTAAGTATAGTGAGTTCATCATTAATCCGCTGTCGTGGATGACTGTCTGATTTATTTTCC ATTATAGCTAACACCTAG |