Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|119480
Gene name
Locationscaffold_9:1541190..1543458
Strand-
Gene length (bp)2268
Transcript length (bp)1998
Coding sequence length (bp)1998
Protein length (aa) 666

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05187 ETF_QO Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 1.8E-05 507 555
PF05187 ETF_QO Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 2.6E-27 585 663
PF13450 NAD_binding_8 NAD(P)-binding Rossmann-like domain 6.8E-07 45 90

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P87111|ETFD_SCHPO Probable electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC20G8.04c PE=3 SV=1 16 665 0.0E+00
sp|Q08822|ETFD_YEAST Probable electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CIR2 PE=1 SV=1 36 665 0.0E+00
sp|Q2KIG0|ETFD_BOVIN Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Bos taurus GN=ETFDH PE=2 SV=1 20 662 1.0E-178
sp|Q16134|ETFD_HUMAN Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Homo sapiens GN=ETFDH PE=1 SV=2 20 662 1.0E-176
sp|Q6UPE1|ETFD_RAT Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Rattus norvegicus GN=Etfdh PE=1 SV=1 23 662 1.0E-176
[Show all]
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Swissprot ID Swissprot Description Start End E-value
sp|P87111|ETFD_SCHPO Probable electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC20G8.04c PE=3 SV=1 16 665 0.0E+00
sp|Q08822|ETFD_YEAST Probable electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CIR2 PE=1 SV=1 36 665 0.0E+00
sp|Q2KIG0|ETFD_BOVIN Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Bos taurus GN=ETFDH PE=2 SV=1 20 662 1.0E-178
sp|Q16134|ETFD_HUMAN Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Homo sapiens GN=ETFDH PE=1 SV=2 20 662 1.0E-176
sp|Q6UPE1|ETFD_RAT Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Rattus norvegicus GN=Etfdh PE=1 SV=1 23 662 1.0E-176
sp|Q921G7|ETFD_MOUSE Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Mus musculus GN=Etfdh PE=1 SV=1 20 662 2.0E-176
sp|Q5RDD3|ETFD_PONAB Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Pongo abelii GN=ETFDH PE=2 SV=1 20 662 1.0E-175
sp|P55931|ETFD_PIG Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Sus scrofa GN=ETFDH PE=1 SV=2 7 662 5.0E-175
sp|Q11190|ETFD_CAEEL Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Caenorhabditis elegans GN=let-721 PE=3 SV=2 19 662 4.0E-170
sp|Q54XM6|ETFD_DICDI Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Dictyostelium discoideum GN=etfdh PE=3 SV=1 36 662 3.0E-167
sp|O22854|ETFQO_ARATH Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Arabidopsis thaliana GN=ETFQO PE=2 SV=1 34 663 6.0E-165
sp|Q337B8|ETFQO_ORYSJ Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Oryza sativa subsp. japonica GN=Os10g0516300 PE=3 SV=1 42 663 1.0E-155
sp|Q9HZP5|ETFD_PSEAE Electron transfer flavoprotein-ubiquinone oxidoreductase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=PA2953 PE=1 SV=1 35 664 1.0E-148
sp|P94132|ETFD_ACIAD Probable electron transfer flavoprotein-ubiquinone oxidoreductase OS=Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1) GN=etfD PE=3 SV=1 32 664 2.0E-135
sp|P26484|FIXC_AZOC5 Protein FixC OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 / NBRC 14845 / NCIMB 13405 / ORS 571) GN=fixC PE=3 SV=2 38 437 1.0E-23
sp|P77337|YDIS_ECOLI Probable electron transfer flavoprotein-quinone oxidoreductase YdiS OS=Escherichia coli (strain K12) GN=ydiS PE=3 SV=1 37 437 2.0E-22
sp|Q53208|FIXC_RHISN Protein FixC OS=Rhizobium sp. (strain NGR234) GN=fixC PE=3 SV=1 38 437 1.0E-18
sp|Q8Z9K9|FIXC_SALTI Protein FixC OS=Salmonella typhi GN=fixC PE=3 SV=1 37 409 2.0E-15
sp|Q8ZRW9|FIXC_SALTY Protein FixC OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=fixC PE=3 SV=1 37 409 2.0E-15
sp|P10331|FIXC_BRADU Protein FixC OS=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) GN=fixC PE=3 SV=2 70 443 2.0E-15
sp|P09820|FIXC_RHIME Protein FixC OS=Rhizobium meliloti (strain 1021) GN=fixC PE=3 SV=1 38 441 2.0E-14
sp|Q7AHT0|FIXC_ECO57 Protein FixC OS=Escherichia coli O157:H7 GN=fixC PE=3 SV=1 37 373 1.0E-13
sp|P53572|FIXC_AZOVI Protein FixC OS=Azotobacter vinelandii GN=fixC PE=3 SV=1 70 442 2.0E-13
sp|Q83SQ7|FIXC_SHIFL Protein FixC OS=Shigella flexneri GN=fixC PE=3 SV=1 37 373 2.0E-13
sp|P68644|FIXC_ECOLI Protein FixC OS=Escherichia coli (strain K12) GN=fixC PE=3 SV=1 37 373 3.0E-13
sp|P68645|FIXC_ECOL6 Protein FixC OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=fixC PE=3 SV=1 37 373 3.0E-13
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 35 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|119480
MLRRGLLRPAKWSRNRRIQTSVPRLADAFDPVTAERAEDEVDVCIVGGGPAGLSAAIRLKQLEKETGKEIRVVVL
EKGSEVGAHIVSGAVIEPRALDELLPKWQTMEGHPLTRPATSSHMRFLTKNLSLPFPHPPQMNNDGNYILSLSQF
TRWLANIAENEYGVEIYPGFAGSQLLLSPTADAHDPWGNKVRSVQGVITNEVGLARNFTMKSSFEPGMAFRAKVT
LLGEGAHGSLSKQAISMYQLRKEAQPQTYGIGLKEVWRVDPENYQPGLVNHFLGWPLAYDVYGGGFEYHMDDGLV
TLGIVIGLDYKNPYLNPYRELQRLKHHPHFRKLLSGKSERLSYAARVLNEGGLQSVPRLHFPGGALIGCSAGFVN
VAKIKGTHNAMKTGMLAAESAFTTVHPTESSQASEAAADLSSYETAYKKSWVHEDLHEVRNLRPSFNTKLGIWGG
IMYSGVDSLFLKGSVPWNFRHSSTHITEESTSSLDAAETNPASWHQPIDYPAFEPPLSTDLMTSVALTGTNHAED
QPIHLRVVKTLEYMNQLDQIRAHNEKANPAIGAGSKAVETCSKDGDSGKVEEEKRVRCDHVRKNVGEYAGLLGRA
CPAGVYEYVDQEGAEVGNGEGWQGKKLVINSQNCIHCKLCDVKVPSQDITWTVPEGGGGPKYTNT*
Coding >AgabiH97|119480
ATGTTACGTCGGGGCCTGCTGAGGCCTGCCAAATGGTCGCGGAACCGTCGAATACAAACATCTGTGCCACGACTG
GCAGATGCGTTTGATCCGGTCACTGCGGAACGCGCCGAGGACGAAGTGGATGTCTGCATCGTCGGAGGAGGCCCG
GCTGGGCTCAGCGCTGCAATCCGCCTCAAGCAGTTGGAGAAGGAGACTGGCAAAGAAATCCGCGTGGTCGTCCTC
GAAAAGGGTTCCGAAGTCGGTGCACATATTGTATCTGGAGCCGTCATTGAGCCTCGGGCACTCGATGAGCTCTTG
CCAAAATGGCAGACTATGGAAGGCCATCCTCTCACAAGACCGGCAACATCATCGCATATGCGTTTCCTCACTAAG
AACCTCTCTCTCCCTTTTCCTCATCCGCCACAAATGAACAACGACGGAAATTATATCTTATCCCTGTCTCAATTC
ACCCGTTGGCTAGCCAATATCGCAGAAAACGAGTATGGAGTCGAAATTTATCCAGGTTTTGCGGGGTCTCAATTG
CTTTTGAGCCCTACGGCCGACGCACACGATCCCTGGGGAAACAAAGTTCGCAGCGTCCAAGGTGTCATTACAAAC
GAGGTCGGCCTCGCGCGCAACTTCACGATGAAATCCTCGTTCGAGCCCGGTATGGCTTTCCGAGCCAAGGTCACG
CTCCTTGGTGAAGGGGCTCATGGTTCACTATCGAAACAGGCCATAAGCATGTACCAACTGCGAAAGGAAGCTCAG
CCTCAGACCTACGGTATCGGTCTCAAAGAAGTTTGGCGCGTTGATCCGGAGAATTATCAGCCCGGTCTAGTGAAC
CATTTCTTGGGTTGGCCCCTTGCATATGACGTTTATGGTGGCGGTTTCGAGTACCACATGGATGACGGTTTGGTC
ACTCTTGGTATAGTTATTGGGCTGGACTACAAGAACCCCTATTTGAACCCGTATCGTGAGCTTCAGCGACTTAAA
CATCATCCTCACTTCCGCAAACTTCTCTCTGGAAAATCAGAACGACTCTCCTACGCCGCACGCGTTCTCAACGAA
GGAGGTCTACAATCCGTTCCTCGATTACACTTCCCTGGAGGCGCTCTTATCGGTTGCTCCGCTGGTTTCGTCAAT
GTAGCGAAAATCAAGGGCACACATAATGCAATGAAAACCGGAATGCTCGCGGCGGAATCCGCGTTCACCACCGTT
CATCCAACAGAAAGCTCACAAGCCTCCGAAGCAGCCGCTGATTTGTCTTCATACGAAACAGCTTACAAAAAGTCT
TGGGTTCACGAGGATCTCCATGAAGTACGTAACTTGCGACCGTCTTTCAACACGAAACTTGGTATCTGGGGTGGG
ATAATGTACTCTGGTGTGGACTCTCTATTCCTAAAGGGTAGCGTCCCTTGGAATTTCCGCCACTCTTCCACTCAT
ATCACTGAGGAAAGTACATCTTCACTCGATGCGGCAGAAACAAATCCAGCATCTTGGCATCAACCAATCGACTAC
CCAGCCTTTGAACCTCCTCTTTCGACCGATCTCATGACCAGCGTCGCGCTCACAGGTACCAACCATGCTGAAGAC
CAACCAATCCATCTCCGCGTAGTCAAGACCCTCGAATACATGAACCAGCTCGATCAAATCCGTGCTCACAATGAA
AAAGCTAACCCGGCAATCGGTGCTGGCTCGAAAGCCGTTGAAACCTGCTCGAAAGATGGTGATTCAGGAAAAGTA
GAAGAGGAAAAAAGGGTGAGGTGTGATCATGTCAGAAAGAATGTTGGTGAATACGCTGGGTTACTCGGGCGAGCA
TGTCCCGCCGGTGTTTATGAGTACGTTGATCAAGAAGGTGCGGAAGTAGGTAATGGAGAAGGATGGCAAGGGAAA
AAACTGGTGATTAATTCTCAGAATTGCATTCACTGCAAGTTGTGCGATGTCAAAGTACCCTCGCAGGACATCACT
TGGACTGTCCCGGAGGGTGGAGGAGGTCCTAAGTATACTAACACCTAG
Transcript >AgabiH97|119480
ATGTTACGTCGGGGCCTGCTGAGGCCTGCCAAATGGTCGCGGAACCGTCGAATACAAACATCTGTGCCACGACTG
GCAGATGCGTTTGATCCGGTCACTGCGGAACGCGCCGAGGACGAAGTGGATGTCTGCATCGTCGGAGGAGGCCCG
GCTGGGCTCAGCGCTGCAATCCGCCTCAAGCAGTTGGAGAAGGAGACTGGCAAAGAAATCCGCGTGGTCGTCCTC
GAAAAGGGTTCCGAAGTCGGTGCACATATTGTATCTGGAGCCGTCATTGAGCCTCGGGCACTCGATGAGCTCTTG
CCAAAATGGCAGACTATGGAAGGCCATCCTCTCACAAGACCGGCAACATCATCGCATATGCGTTTCCTCACTAAG
AACCTCTCTCTCCCTTTTCCTCATCCGCCACAAATGAACAACGACGGAAATTATATCTTATCCCTGTCTCAATTC
ACCCGTTGGCTAGCCAATATCGCAGAAAACGAGTATGGAGTCGAAATTTATCCAGGTTTTGCGGGGTCTCAATTG
CTTTTGAGCCCTACGGCCGACGCACACGATCCCTGGGGAAACAAAGTTCGCAGCGTCCAAGGTGTCATTACAAAC
GAGGTCGGCCTCGCGCGCAACTTCACGATGAAATCCTCGTTCGAGCCCGGTATGGCTTTCCGAGCCAAGGTCACG
CTCCTTGGTGAAGGGGCTCATGGTTCACTATCGAAACAGGCCATAAGCATGTACCAACTGCGAAAGGAAGCTCAG
CCTCAGACCTACGGTATCGGTCTCAAAGAAGTTTGGCGCGTTGATCCGGAGAATTATCAGCCCGGTCTAGTGAAC
CATTTCTTGGGTTGGCCCCTTGCATATGACGTTTATGGTGGCGGTTTCGAGTACCACATGGATGACGGTTTGGTC
ACTCTTGGTATAGTTATTGGGCTGGACTACAAGAACCCCTATTTGAACCCGTATCGTGAGCTTCAGCGACTTAAA
CATCATCCTCACTTCCGCAAACTTCTCTCTGGAAAATCAGAACGACTCTCCTACGCCGCACGCGTTCTCAACGAA
GGAGGTCTACAATCCGTTCCTCGATTACACTTCCCTGGAGGCGCTCTTATCGGTTGCTCCGCTGGTTTCGTCAAT
GTAGCGAAAATCAAGGGCACACATAATGCAATGAAAACCGGAATGCTCGCGGCGGAATCCGCGTTCACCACCGTT
CATCCAACAGAAAGCTCACAAGCCTCCGAAGCAGCCGCTGATTTGTCTTCATACGAAACAGCTTACAAAAAGTCT
TGGGTTCACGAGGATCTCCATGAAGTACGTAACTTGCGACCGTCTTTCAACACGAAACTTGGTATCTGGGGTGGG
ATAATGTACTCTGGTGTGGACTCTCTATTCCTAAAGGGTAGCGTCCCTTGGAATTTCCGCCACTCTTCCACTCAT
ATCACTGAGGAAAGTACATCTTCACTCGATGCGGCAGAAACAAATCCAGCATCTTGGCATCAACCAATCGACTAC
CCAGCCTTTGAACCTCCTCTTTCGACCGATCTCATGACCAGCGTCGCGCTCACAGGTACCAACCATGCTGAAGAC
CAACCAATCCATCTCCGCGTAGTCAAGACCCTCGAATACATGAACCAGCTCGATCAAATCCGTGCTCACAATGAA
AAAGCTAACCCGGCAATCGGTGCTGGCTCGAAAGCCGTTGAAACCTGCTCGAAAGATGGTGATTCAGGAAAAGTA
GAAGAGGAAAAAAGGGTGAGGTGTGATCATGTCAGAAAGAATGTTGGTGAATACGCTGGGTTACTCGGGCGAGCA
TGTCCCGCCGGTGTTTATGAGTACGTTGATCAAGAAGGTGCGGAAGTAGGTAATGGAGAAGGATGGCAAGGGAAA
AAACTGGTGATTAATTCTCAGAATTGCATTCACTGCAAGTTGTGCGATGTCAAAGTACCCTCGCAGGACATCACT
TGGACTGTCCCGGAGGGTGGAGGAGGTCCTAAGTATACTAACACCTAG
Gene >AgabiH97|119480
ATGTTACGTCGGGGCCTGCTGAGGCCTGCCAAATGGTCGCGGAACCGTCGAATACAAACATCTGTGCCACGACTG
GCAGATGCGTTTGATCCGGTCACTGCGGAACGCGCCGAGGACGAAGTGGATGTCTGCATCGTCGGAGGAGGCCCG
GCTGGGCTCAGCGCTGCAATCCGCCTCAAGCAGTTGGAGAAGGAGACTGGCAAAGAAATCCGCGTGGTCGTCCTC
GAAAAGGGTTCCGAAGTCGGTGAGTGTTCTTAAGTTCCCTCTCGAAAAGCTTGCCAAATCCTGGTAGGTGCACAT
ATTGTATCTGGAGCCGTCATTGAGCCTCGGGCACTCGATGAGCTCTTGCCAAAATGGCAGACTATGGAAGGCCAT
CCTCTCACAAGACCGGCAACATCATCGCATATGCGTTTCCTCACTAAGAACCTCTCTCTCCCTTTTCCTCATCCG
CCACAAATGAACAACGACGGAAATTATATCTTATCCCTGTCTCAATTCACCCGTTGGCTAGCCAATATCGCAGAA
AACGAGTATGGAGTCGAAATTTATCCAGGTTTTGCGGGGTCTCAATTGCTTTTGAGCCCTACGGCCGACGCACAC
GATCCCTGGGGAAACAAAGTTCGCAGCGTCCAAGGTGTCATTACAAACGAGGTCGGCCTCGCGCGCAACTTCACG
ATGAAATCCTCGTTCGAGCCCGGTATGGCTTTCCGAGCCAAGGTCACGCTCCTTGGTGAAGGGGCTCATGGTTCA
CTATCGAAACAGGCCATAAGCATGTACCAACTGCGAAAGGAAGCTCAGCCTCAGACCTACGGTATCGGTCTCAAA
GAAGTTTGGCGCGTTGATCCGGAGAATTATCAGCCCGGTCTAGTGAACCATTTCTTGGGTTGGCCCCTTGCATAT
GACGTTTATGGTGGCGGTTTCGAGTACCACATGGATGACGGTTTGGTCACTCTTGGTATAGTTATTGGGCTGGAC
TACAAGAACCCCTATTTGAACCCGTATCGTGAGCTTCAGGTGCGTATCTCCTTTATGATTAGATACAACAAAACT
TCATTTTGGCCCAGCGACTTAAACATCATCCTCACTTCCGCAAACTTCTCTCTGGAAAATCAGAACGACTCTCCT
ACGCCGCACGCGTTCTCAACGAAGGAGGTCTACAATCCGTTCCTCGATTACACTTCCCTGGAGGCGCTCTTATCG
GTTGCTCCGCTGGTTTCGTCAATGTAGCGAAAATCAAGGGCACACATAATGCAATGAAAACCGGAATGCTCGCGG
CGGAATCCGCGTTCACCACCGTTCATCCAACAGAAAGCTCACAAGCCTCCGAAGCAGCCGCTGATTTGTCTTCAT
ACGAAACAGCTTACAAAAAGTCTTGGGTTCACGAGGATCTCCATGAAGTACGTAACTTGCGACCGTCTTTCAACA
CGAAACTTGGTATCTGGGGTGGGATAATGTACTCTGGTGTGGACTCTCTATTCCTAAAGGGTAGCGTCCCTTGGA
ATTTCCGCCACTCTTCCACTCATATCACTGAGGTCGGTGATGAGCTTGACTCTCTGCCGTCGTCTTTAAACTCAG
GCTTTTTGACAGGAAAGTACATCTTCACTCGATGCGGCAGAAACAAATCCAGCATCTTGGCATCAACCAATCGAC
TACCCAGCCTTTGAACCTCCTCTTTCGACCGATCTCATGACCAGCGTCGCGCTCACAGGTACCAACCATGCTGAA
GACCAACCAATCCATCTCCGCGTAGTCAAGACCCTCGAATACATGAACCAGCTCGATCAAATCCGTGCTCACAAT
GAAAAAGCTAACCCGGCAATCGGTGCTGGCTCGAAAGCCGTTGAAACCTGCTCGAAAGATGGTGATTCAGGAAAA
GTAGAAGAGGAAAAAAGGGTGAGGTGTGATCATGTCAGAAAGAATGTTGGTGAATACGCTGGGTTACTCGGGCGA
GCATGTCCCGCCGGTGTTTATGAGTACGTTGATCAAGAAGGTGCGGAAGTAGGTAATGGAGAAGGATGGCAAGGG
AAAAAACTGGTGATTAATTCTCAGGTGTGTACGTTTCAGACCTCTTCGCTTTCTCTCCGTTGAACATCGTGGGTT
ATGTCTAGAATTGCATTCACTGCAAGTTGTGCGATGTCAAAGTACCCTCGCAGGACATCACTTGGACTGTCCCGG
AGGGTGGAGGAGGTCCTAAGTATAGTGAGTTCATCATTAATCCGCTGTCGTGGATGACTGTCTGATTTATTTTCC
ATTATAGCTAACACCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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