Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|119450
Gene name
Locationscaffold_9:1532316..1533007
Strand-
Gene length (bp)691
Transcript length (bp)516
Coding sequence length (bp)516
Protein length (aa) 172

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 24 0.45

Transmembrane Domains

Domain # Start End Length
1 4 26 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|119450
MFQGLNQLIVLTTLLLVGLGGLAAPTRRQSDYVRIRNADLDLCAAAFDVDVGTDVEFDDCVHFFDEDDDDDEYSQ
LWILEAGTLPGSNTMRPYWDDTLCAGITATDFSLKLQTCDGADPSDIDLFFETNLDLPGIDLGARGVCMTIDDNG
EAVMAACVEGSNDQDIHSEAA*
Coding >AgabiH97|119450
ATGTTCCAAGGCTTAAACCAACTTATCGTTCTTACCACCCTCCTCTTGGTCGGGCTTGGAGGACTTGCCGCTCCT
ACCCGCCGACAGAGCGATTATGTCAGGATCCGGAACGCAGACCTTGATCTATGTGCTGCTGCGTTTGATGTAGAC
GTTGGCACTGATGTGGAATTTGACGATTGCGTTCATTTCTTTGATGAAGATGATGACGACGATGAGTACAGCCAG
CTGTGGATTCTGGAAGCCGGTACACTACCAGGCTCAAACACAATGAGGCCATACTGGGACGATACGTTGTGTGCC
GGTATTACTGCAACTGACTTCTCTCTCAAACTGCAAACTTGCGACGGTGCAGACCCAAGTGATATCGATTTGTTC
TTTGAGACAAACCTGGATCTACCGGGGATTGATCTTGGTGCTCGAGGTGTCTGTATGACGATTGACGATAACGGC
GAGGCAGTGATGGCCGCTTGCGTGGAAGGCAGCAATGACCAAGACATACACTCCGAAGCTGCTTGA
Transcript >AgabiH97|119450
ATGTTCCAAGGCTTAAACCAACTTATCGTTCTTACCACCCTCCTCTTGGTCGGGCTTGGAGGACTTGCCGCTCCT
ACCCGCCGACAGAGCGATTATGTCAGGATCCGGAACGCAGACCTTGATCTATGTGCTGCTGCGTTTGATGTAGAC
GTTGGCACTGATGTGGAATTTGACGATTGCGTTCATTTCTTTGATGAAGATGATGACGACGATGAGTACAGCCAG
CTGTGGATTCTGGAAGCCGGTACACTACCAGGCTCAAACACAATGAGGCCATACTGGGACGATACGTTGTGTGCC
GGTATTACTGCAACTGACTTCTCTCTCAAACTGCAAACTTGCGACGGTGCAGACCCAAGTGATATCGATTTGTTC
TTTGAGACAAACCTGGATCTACCGGGGATTGATCTTGGTGCTCGAGGTGTCTGTATGACGATTGACGATAACGGC
GAGGCAGTGATGGCCGCTTGCGTGGAAGGCAGCAATGACCAAGACATACACTCCGAAGCTGCTTGA
Gene >AgabiH97|119450
ATGTTCCAAGGCTTAAACCAACTTATCGTTCTTACCACCCTCCTCTTGGTCGGGCTTGGAGGACTTGCCGCTCCT
ACCCGCCGACAGAGCGATTATGTCAGGATCCGGAACGCAGACCTTGATCTATGTGCTGCTGCGTTTGATGTAGAC
GTTGGCACTGATGTGGAATTGTACGTCAATTTTTTTTCCTTCTACATTTCTTGTACTCACATTCCTTTTCTATTA
CTTAGTGACGATTGCGTTCATTTCTTTGATGAAGATGATGACGACGATGAGTACAGCCAGCTGTGGATTCTGGAA
GCCGGTACACTACCAGGCTCAAACACAATGAGGCCATACTGGGACGATACGTTGTGTGCCGGTATTACTGCAACT
GGTGAGTCCACATGATTTAAGCTCGAATTACTGTGGGAGTCAACTTATAATTGTATCAGACTTCTCTCTCAAACT
GCAAACTTGCGACGGTGCAGACCCAAGTGATATCGATTTGTTCTTTGAGACAAACCTGGATCTACCGGGGATTGA
TCTTGGTGCTCGAGGTTCGTCGCTATATCTACCTTCCTGAATAACATGGGAGATAACCTGTGTATAAAAAGGTGT
CTGTATGACGATTGACGATAACGGCGAGGCAGTGATGGCCGCTTGCGTGGAAGGCAGCAATGACCAAGACATACA
CTCCGAAGCTGCTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail