Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|118580
Gene name
Locationscaffold_9:1313534..1314124
Strand-
Gene length (bp)590
Transcript length (bp)255
Coding sequence length (bp)255
Protein length (aa) 85

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
Yes 1 - 35 0.5

Transmembrane Domains

Domain # Start End Length
1 13 30 17

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|118580
MVAGVTRQCTSSVFFFFLFLFFLFFVAMNHPSRAYARLTRALCDTVCPRRHRQTVRDHSEYDCGRTSRHTTRGRA
SPLIHIELR*
Coding >AgabiH97|118580
ATGGTAGCTGGGGTGACTCGGCAGTGCACCAGCTCTGTTTTTTTTTTTTTTCTATTCCTATTCTTTCTTTTCTTT
GTTGCAATGAATCATCCATCAAGAGCATATGCGCGGTTAACCAGAGCGCTTTGTGACACGGTGTGCCCTCGACGC
CACCGTCAAACTGTTAGAGATCATTCAGAATACGACTGTGGTAGAACGTCCAGGCATACAACTAGGGGACGTGCT
TCTCCTTTGATACACATCGAACTACGATAG
Transcript >AgabiH97|118580
ATGGTAGCTGGGGTGACTCGGCAGTGCACCAGCTCTGTTTTTTTTTTTTTTCTATTCCTATTCTTTCTTTTCTTT
GTTGCAATGAATCATCCATCAAGAGCATATGCGCGGTTAACCAGAGCGCTTTGTGACACGGTGTGCCCTCGACGC
CACCGTCAAACTGTTAGAGATCATTCAGAATACGACTGTGGTAGAACGTCCAGGCATACAACTAGGGGACGTGCT
TCTCCTTTGATACACATCGAACTACGATAG
Gene >AgabiH97|118580
ATGGTAGCTGTACGTTCGTTTGACTTTTTTAAATCGCCTCTCGTCGCTAACTGGATGAACAAGGGGGTGACTCGG
CAGTGCACCAGCTCTGTTTTTTTTTTTTTTCTATTCCTATTCTTTCTTTTCTTTGTTGCAATGAATCATCCATCA
AGAGCATATGGTAAGTTTGTTTTTCATTGCTTGGACGTGTTCGCTGATTGTTTTGATTATAGCGCGGTTAACCAG
GTGAGTTTTGCTTTATTCGCTTGGTGATTATGAAACGTTTGGGCTTTTCTACTGGAGAGCGCTTTGTGACACGGT
GAGTCTGTCAAACGTTTTCGCTGGTGGATTTGTACTGCTCATTGAAGAAGGATAGGTGTGCCCTCGACGGTGAAC
GGCATATAAATTCGATGGTCACCCGTCTATCTCTCGCCTCGTTCAAGCCACCGTCAAACTGTTAGAGATCATTCA
GAATACGACTGTGGTAGAACGTCCAGGCATACAACTAGGTGCGTCTATTCTCCTTTCTTTCATCCAATCTCTGGC
TAATGCCTGTTTGACTTAACTTAAGGGGACGTGCTTCTCCTTTGATACACATCGAACTACGATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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