© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | AgabiH97|117510 |
| Gene name | |
| Location | scaffold_9:1042834..1044839 |
| Strand | - |
| Gene length (bp) | 2005 |
| Transcript length (bp) | 1551 |
| Coding sequence length (bp) | 1551 |
| Protein length (aa) | 517 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 3.9E-34 | 80 | 469 |
| PF00083 | Sugar_tr | Sugar (and other) transporter | 1.2E-12 | 102 | 470 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q94BZ1|ZIFL1_ARATH | Protein ZINC INDUCED FACILITATOR-LIKE 1 OS=Arabidopsis thaliana GN=ZIFL1 PE=2 SV=1 | 31 | 502 | 1.0E-38 |
| sp|Q3EAQ5|PTR36_ARATH | Probable peptide/nitrate transporter At3g43790 OS=Arabidopsis thaliana GN=ZIFL2 PE=2 SV=2 | 46 | 483 | 3.0E-37 |
| sp|Q8RWN2|ZIF1_ARATH | Protein ZINC INDUCED FACILITATOR 1 OS=Arabidopsis thaliana GN=ZIF1 PE=1 SV=2 | 52 | 484 | 2.0E-34 |
| sp|P25351|YCR3_YEAST | Uncharacterized membrane protein YCR023C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCR023C PE=1 SV=2 | 50 | 402 | 4.0E-31 |
| sp|D8MQN9|MDTG_ERWBE | Multidrug resistance protein MdtG OS=Erwinia billingiae (strain Eb661) GN=mdtG PE=3 SV=1 | 80 | 249 | 4.0E-09 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q94BZ1|ZIFL1_ARATH | Protein ZINC INDUCED FACILITATOR-LIKE 1 OS=Arabidopsis thaliana GN=ZIFL1 PE=2 SV=1 | 31 | 502 | 1.0E-38 |
| sp|Q3EAQ5|PTR36_ARATH | Probable peptide/nitrate transporter At3g43790 OS=Arabidopsis thaliana GN=ZIFL2 PE=2 SV=2 | 46 | 483 | 3.0E-37 |
| sp|Q8RWN2|ZIF1_ARATH | Protein ZINC INDUCED FACILITATOR 1 OS=Arabidopsis thaliana GN=ZIF1 PE=1 SV=2 | 52 | 484 | 2.0E-34 |
| sp|P25351|YCR3_YEAST | Uncharacterized membrane protein YCR023C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCR023C PE=1 SV=2 | 50 | 402 | 4.0E-31 |
| sp|D8MQN9|MDTG_ERWBE | Multidrug resistance protein MdtG OS=Erwinia billingiae (strain Eb661) GN=mdtG PE=3 SV=1 | 80 | 249 | 4.0E-09 |
| sp|A8GCZ5|MDTG_SERP5 | Multidrug resistance protein MdtG OS=Serratia proteamaculans (strain 568) GN=mdtG PE=3 SV=1 | 80 | 217 | 6.0E-09 |
| sp|B4EYY4|MDTG_PROMH | Multidrug resistance protein MdtG OS=Proteus mirabilis (strain HI4320) GN=mdtG PE=3 SV=1 | 80 | 217 | 2.0E-08 |
| sp|P02980|TCR2_ECOLX | Tetracycline resistance protein, class B OS=Escherichia coli GN=tetA PE=1 SV=1 | 66 | 283 | 4.0E-08 |
| sp|P0A4K5|PMRA_STRR6 | Multi-drug resistance efflux pump PmrA OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=pmrA PE=3 SV=1 | 80 | 213 | 2.0E-07 |
| sp|P0A4K4|PMRA_STRPN | Multi-drug resistance efflux pump PmrA OS=Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) GN=pmrA PE=3 SV=1 | 80 | 213 | 2.0E-07 |
| sp|Q14728|MFS10_HUMAN | Major facilitator superfamily domain-containing protein 10 OS=Homo sapiens GN=MFSD10 PE=1 SV=1 | 105 | 222 | 3.0E-07 |
| sp|Q9D2V8|MFS10_MOUSE | Major facilitator superfamily domain-containing protein 10 OS=Mus musculus GN=Mfsd10 PE=1 SV=1 | 105 | 222 | 3.0E-07 |
| sp|P40760|YUXJ_BACSU | Uncharacterized MFS-type transporter YuxJ OS=Bacillus subtilis (strain 168) GN=yuxJ PE=3 SV=3 | 80 | 279 | 4.0E-07 |
| sp|Q0P5M9|MFS10_BOVIN | Major facilitator superfamily domain-containing protein 10 OS=Bos taurus GN=MFSD10 PE=2 SV=1 | 105 | 222 | 1.0E-06 |
| sp|P02981|TCR3_ECOLX | Tetracycline resistance protein, class C OS=Escherichia coli GN=tetA PE=1 SV=1 | 80 | 213 | 6.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0005575 | cellular_component | No |
| GO:0051179 | localization | No |
| GO:0003674 | molecular_function | No |
| GO:0051234 | establishment of localization | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0008150 | biological_process | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 23 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 67 | 89 | 22 |
| 2 | 102 | 124 | 22 |
| 3 | 139 | 161 | 22 |
| 4 | 194 | 216 | 22 |
| 5 | 236 | 258 | 22 |
| 6 | 333 | 355 | 22 |
| 7 | 370 | 392 | 22 |
| 8 | 413 | 435 | 22 |
| 9 | 455 | 477 | 22 |
| 10 | 489 | 511 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|117510 MAPSVLAPHYISFSMTFSRCDDDTIPQNNLNHEIECTSTPVHMAGEDAPVSLEKQRSPLPKFQLSLVLLIQLAEP ITALVIYPFINQFIRNTGITKGDDNWTGYYAGIIESTFFFTETITVFHWGWLSDRIGRRPVLLLGPLGLTFAMLW FGYSTSFWPLVFARCFQGIFNGNIGVSKTIMVELTDKTNVGDAFAIMPLMWSIGSTIGPIIGGAFSNPAQRWPHV FNKIEIFKSHPYFLPCLVSALFALFTFFLAFLGLKETHSDLSARSQREVKAREENSKDLQSAGSTDRLLDYDEST DYGTTKNPTHSPSSSVSERPTLRSMLTSKLTQVIIINYLFLSFTEMAYTVLVPLVYSTRIEFGGLGFNPYQIGMI MGIWGFINAFVQLYLLGTLIRKYGAVSTHLARRNGDVGVGAYISIAVQLLFQFVIWMGYGAIHVIIAETTPKPIL GSMNGIVQMAGCAARTIAPTAASLLFSISLERHLVGGDLVYLLLVAVVLAGIKFSLALPGHKEVQY* |
| Coding | >AgabiH97|117510 ATGGCTCCTTCCGTTCTCGCTCCTCACTACATTTCTTTTTCTATGACTTTTTCTAGGTGCGACGATGATACAATT CCACAAAACAACTTGAATCATGAAATCGAATGCACCTCGACGCCAGTTCACATGGCTGGTGAAGATGCACCAGTT TCTCTCGAGAAACAACGGTCGCCACTTCCAAAATTCCAATTGTCTCTTGTACTTCTCATCCAGTTGGCAGAGCCC ATTACTGCTCTTGTCATCTATCCTTTCATCAATCAATTCATTCGCAACACTGGAATTACGAAAGGCGACGACAAC TGGACCGGCTATTATGCCGGTATCATTGAATCCACCTTTTTCTTTACCGAAACTATCACCGTCTTTCATTGGGGA TGGTTGTCTGATCGGATCGGTAGGAGGCCTGTGTTGCTCCTAGGCCCGCTGGGTTTGACTTTTGCGATGCTCTGG TTTGGCTATTCAACTTCCTTCTGGCCGCTGGTATTCGCTCGTTGCTTCCAAGGAATTTTCAACGGTAACATTGGT GTATCTAAAACAATCATGGTAGAGCTGACGGACAAGACCAATGTTGGAGATGCTTTTGCGATAATGCCTCTTATG TGGAGTATAGGTTCAACTATTGGTCCTATCATAGGTGGCGCTTTTAGCAATCCAGCCCAACGGTGGCCGCATGTG TTCAACAAAATCGAAATTTTCAAGAGTCACCCTTACTTTTTGCCCTGTCTTGTTTCTGCGCTGTTCGCCTTGTTC ACATTTTTTCTTGCGTTCTTAGGGCTCAAAGAGACCCATTCCGATCTCTCAGCCCGCTCGCAGCGAGAAGTGAAA GCAAGGGAAGAGAATTCAAAAGATTTGCAATCCGCCGGCTCTACAGATAGACTCTTAGATTATGATGAGTCTACA GACTATGGCACCACCAAAAATCCGACGCATAGTCCCTCTTCTTCGGTTTCTGAGCGTCCAACCTTACGTTCCATG CTTACGTCCAAGCTGACGCAAGTAATCATCATTAATTATCTTTTCCTCTCATTCACCGAGATGGCTTACACTGTT CTCGTACCACTCGTTTATTCGACGAGAATCGAATTTGGTGGTCTGGGGTTTAACCCTTACCAGATTGGTATGATT ATGGGTATCTGGGGTTTTATCAATGCCTTTGTACAGCTATACCTGCTTGGCACACTAATCAGGAAATACGGAGCG GTTTCGACTCATCTTGCCCGCCGCAATGGAGACGTTGGAGTCGGGGCATATATATCAATTGCAGTACAGCTTTTG TTCCAATTCGTCATATGGATGGGATATGGTGCGATTCATGTAATCATCGCTGAAACTACTCCGAAACCTATACTT GGATCCATGAATGGCATCGTTCAGATGGCTGGATGTGCGGCTCGGACCATCGCTCCTACCGCAGCATCCTTATTA TTCTCTATATCTTTGGAGAGACACCTAGTAGGAGGGGACTTGGTTTACCTTCTGCTGGTCGCTGTAGTTCTCGCC GGGATCAAATTCAGTTTGGCTTTGCCAGGGCACAAAGAGGTACAGTACTAG |
| Transcript | >AgabiH97|117510 ATGGCTCCTTCCGTTCTCGCTCCTCACTACATTTCTTTTTCTATGACTTTTTCTAGGTGCGACGATGATACAATT CCACAAAACAACTTGAATCATGAAATCGAATGCACCTCGACGCCAGTTCACATGGCTGGTGAAGATGCACCAGTT TCTCTCGAGAAACAACGGTCGCCACTTCCAAAATTCCAATTGTCTCTTGTACTTCTCATCCAGTTGGCAGAGCCC ATTACTGCTCTTGTCATCTATCCTTTCATCAATCAATTCATTCGCAACACTGGAATTACGAAAGGCGACGACAAC TGGACCGGCTATTATGCCGGTATCATTGAATCCACCTTTTTCTTTACCGAAACTATCACCGTCTTTCATTGGGGA TGGTTGTCTGATCGGATCGGTAGGAGGCCTGTGTTGCTCCTAGGCCCGCTGGGTTTGACTTTTGCGATGCTCTGG TTTGGCTATTCAACTTCCTTCTGGCCGCTGGTATTCGCTCGTTGCTTCCAAGGAATTTTCAACGGTAACATTGGT GTATCTAAAACAATCATGGTAGAGCTGACGGACAAGACCAATGTTGGAGATGCTTTTGCGATAATGCCTCTTATG TGGAGTATAGGTTCAACTATTGGTCCTATCATAGGTGGCGCTTTTAGCAATCCAGCCCAACGGTGGCCGCATGTG TTCAACAAAATCGAAATTTTCAAGAGTCACCCTTACTTTTTGCCCTGTCTTGTTTCTGCGCTGTTCGCCTTGTTC ACATTTTTTCTTGCGTTCTTAGGGCTCAAAGAGACCCATTCCGATCTCTCAGCCCGCTCGCAGCGAGAAGTGAAA GCAAGGGAAGAGAATTCAAAAGATTTGCAATCCGCCGGCTCTACAGATAGACTCTTAGATTATGATGAGTCTACA GACTATGGCACCACCAAAAATCCGACGCATAGTCCCTCTTCTTCGGTTTCTGAGCGTCCAACCTTACGTTCCATG CTTACGTCCAAGCTGACGCAAGTAATCATCATTAATTATCTTTTCCTCTCATTCACCGAGATGGCTTACACTGTT CTCGTACCACTCGTTTATTCGACGAGAATCGAATTTGGTGGTCTGGGGTTTAACCCTTACCAGATTGGTATGATT ATGGGTATCTGGGGTTTTATCAATGCCTTTGTACAGCTATACCTGCTTGGCACACTAATCAGGAAATACGGAGCG GTTTCGACTCATCTTGCCCGCCGCAATGGAGACGTTGGAGTCGGGGCATATATATCAATTGCAGTACAGCTTTTG TTCCAATTCGTCATATGGATGGGATATGGTGCGATTCATGTAATCATCGCTGAAACTACTCCGAAACCTATACTT GGATCCATGAATGGCATCGTTCAGATGGCTGGATGTGCGGCTCGGACCATCGCTCCTACCGCAGCATCCTTATTA TTCTCTATATCTTTGGAGAGACACCTAGTAGGAGGGGACTTGGTTTACCTTCTGCTGGTCGCTGTAGTTCTCGCC GGGATCAAATTCAGTTTGGCTTTGCCAGGGCACAAAGAGGTACAGTACTAG |
| Gene | >AgabiH97|117510 ATGGCTCCTTCCGTGAGTTATTGATCCCAAAGTCATCCCCGAAGGCGGATTGCTTCTGACATTTTTTTTTACTGA ACTCTCCTCTCACCATTTAGGTTCTCGCTCCTCACTACATTTCTTTTTCTATGACTTTTTCTAGGTGCGACGATG ATACAATTCCACAAAACAACTTGAATCATGAAATCGAATGCACCTCGACGCCAGTTCACATGGCTGGTGAAGATG CACCAGTTTCTCTCGAGAAACAACGGTCGCCACTTCCAAAATTCCAATTGTCTCTTGTACTTCTCATCCAGTTGG CAGAGCCCATTACTGCTCTTGTCATCTATCCTTTCATCAATCAATTCATTCGCAACACTGGAATTACGAAAGGCG ACGACAACTGGACCGGCTATTATGCCGGTATCATTGTAAGTAGTATCATCTTATCACCTTGCAGATGTATACCCT TTATTCCTTCGCCATAGGAATCCACCTTTTTCTTTACCGAAACTATCACCGTCTTTCATTGGGGATGGTTGTCTG ATCGGATCGGTAGGAGGCCTGTGTTGCTCCTAGGCCCGCTGGGTTTGACTTTTGCGATGCTCTGGTTTGGCTATT CAACTTCCTTCTGGCCGCTGGTATTCGCTCGTTGCTTCCAAGGAATTTTCAACGGTAACATTGGTATGCTTAGCT CTTAAAATATTCCTTGTATAATCTTGCTCAAGTCTTTGTAGGTGTATCTAAAACAATCATGGTAGAGGTTAGTTG TTTCTCAAAAGACGGTTAAATATGGTGGAGCTCATTAGTTCAGCTGACGGACAAGACCAATGTTGGAGATGCTTT TGCGATAATGCCTCTTATGTGGAGTATAGGTTCAACTATTGGGTGCGTTACGACGCTTCGATCGTGTGAACAACT TCTAATCCATACACTAGTCCTATCATAGGTGGCGCTTTTAGCAATCCAGCCCAACGGTGGCCGCATGTGTTCAAC AAAATCGAAATTTTCAAGAGTCACCCTTACTTTTTGCCCTGTCTTGTTTCTGCGCTGTTCGCCTTGTTCACATTT TTTCTTGCGTTCTTAGGGCTCAAAGAGGTTCGCATTTACTTGAACCCCAGCATCATTTAGATTAACGCCGCCTGG GCAGACCCATTCCGATCTCTCAGCCCGCTCGCAGCGAGAAGTGAAAGCAAGGGAAGAGAATTCAAAAGATTTGCA ATCCGCCGGCTCTACAGATAGACTCTTAGATTATGATGAGTCTACAGACTATGGCACCACCAAAAATCCGACGCA TAGTCCCTCTTCTTCGGTTTCTGAGCGTCCAACCTTACGTTCCATGCTTACGTCCAAGCTGACGCAAGTAATCAT CATTAATTATCTTTTCCTCTCATTCACCGAGATGGCTTACACTGTTCTCGTACCACTCGTTTATTCGACGAGAAT CGAATTTGGTGGTCTGGGGTTTAACCCTTACCAGATTGGTATGATTATGGGTATCTGGGGTTTTATCAATGCCTT TGTACAGCTATACCTGCTTGGCACACTAATCAGGAAATACGGAGCGGGTCTGATATATAAAATCTCCTACGCGTC CTTCTTGATATGCTTCCTGATGTTCCCAGTTTCGACTCATCTTGCCCGCCGCAATGGAGACGTTGGAGTCGGGGC ATATATATCAATTGCAGTACAGCTTTTGTTCCAATTCGTCATATGGATGGGATATGGTAGGTCCACCTTGTCGAA TTATGCTTCCTCTCCTCATTCAGCTATCGCAGGTGCGATTCATGTAATCATCGCTGAAACTACTCCGAAACCTAT ACTTGGATCCATGAATGGCATCGTTCAGATGGCTGGATGTGCGGCTCGGACCATCGCTCCTACCGCAGCATCCTT ATTATTCTCTATATCTTTGGAGAGACACCTAGTAGGAGGGGACTTGGTTTACCTTCTGCTGGTCGCTGTAGTTCT CGCCGGGATCAAATTCAGTTTGGCTTTGCCAGGGCACAAAGAGGTACAGTACTAG |