Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|116950
Gene name
Locationscaffold_9:870663..871804
Strand+
Gene length (bp)1141
Transcript length (bp)867
Coding sequence length (bp)867
Protein length (aa) 289

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10342 Kre9_KNH Kre9/KNH-like N-terminal Ig-like domain 2.3E-07 26 108

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|116950
MYPCLFLLLALDAITLVNAGLYVVKPLLGSTCHAGKPCTVDWLDDGTNPLLTAIGVVDVGLYHGKQQLVQTIRPV
NVATVHSLTFTPIPEAGPNSDSYYLSLVSTSLSQNASQPYAAFSSFFRLDGMTGSFDTPNSAATTSFPVPSSVAT
SGKPLPTDTVLSTITVGVISSASSSSISSHSAHTTTSLRQSSAAAPTIDSSASIASVVPINNPPAVSPTSSRFST
LVSPPFTISPAAESPLSSSSSSTLLPSATVANTTPPNGATTCNISSAANIFIATTILFLVMAF*
Coding >AgabiH97|116950
ATGTACCCCTGTCTCTTCCTTCTCCTCGCCCTCGACGCGATCACGCTCGTCAATGCTGGACTTTACGTCGTCAAA
CCTCTTCTGGGTTCAACCTGTCATGCCGGAAAGCCATGCACTGTTGATTGGCTTGATGACGGCACCAATCCGCTC
TTAACAGCAATCGGCGTCGTCGACGTCGGACTTTACCATGGAAAACAGCAATTGGTACAAACCATCCGACCCGTG
AACGTCGCCACAGTTCACTCCCTAACATTTACCCCTATCCCTGAAGCTGGACCTAACTCGGATAGCTATTACCTT
TCATTGGTCTCTACATCCCTTTCACAAAATGCGTCTCAGCCCTATGCAGCTTTCTCTTCTTTCTTTCGGCTGGAC
GGAATGACAGGATCTTTTGACACTCCCAACTCCGCGGCTACCACATCCTTTCCCGTTCCATCCTCAGTTGCAACG
AGTGGTAAACCTCTTCCGACCGATACCGTATTATCCACTATAACTGTCGGTGTGATTTCCTCTGCCTCTTCAAGC
TCAATATCGTCGCATTCCGCGCATACAACGACTTCGTTAAGACAGTCGAGTGCTGCGGCTCCAACGATTGACTCT
TCTGCATCGATTGCTTCTGTTGTTCCAATTAACAATCCACCTGCTGTGTCCCCAACGTCGTCGAGGTTCTCGACA
TTGGTCTCGCCGCCTTTCACCATCTCTCCCGCGGCTGAGTCGCCGTTGTCGTCGTCGAGCTCCTCTACGCTCCTC
CCATCAGCCACGGTTGCCAATACAACCCCTCCAAACGGTGCCACTACTTGTAACATCTCAAGTGCCGCCAATATC
TTCATTGCAACTACAATTCTGTTCCTCGTGATGGCTTTCTAA
Transcript >AgabiH97|116950
ATGTACCCCTGTCTCTTCCTTCTCCTCGCCCTCGACGCGATCACGCTCGTCAATGCTGGACTTTACGTCGTCAAA
CCTCTTCTGGGTTCAACCTGTCATGCCGGAAAGCCATGCACTGTTGATTGGCTTGATGACGGCACCAATCCGCTC
TTAACAGCAATCGGCGTCGTCGACGTCGGACTTTACCATGGAAAACAGCAATTGGTACAAACCATCCGACCCGTG
AACGTCGCCACAGTTCACTCCCTAACATTTACCCCTATCCCTGAAGCTGGACCTAACTCGGATAGCTATTACCTT
TCATTGGTCTCTACATCCCTTTCACAAAATGCGTCTCAGCCCTATGCAGCTTTCTCTTCTTTCTTTCGGCTGGAC
GGAATGACAGGATCTTTTGACACTCCCAACTCCGCGGCTACCACATCCTTTCCCGTTCCATCCTCAGTTGCAACG
AGTGGTAAACCTCTTCCGACCGATACCGTATTATCCACTATAACTGTCGGTGTGATTTCCTCTGCCTCTTCAAGC
TCAATATCGTCGCATTCCGCGCATACAACGACTTCGTTAAGACAGTCGAGTGCTGCGGCTCCAACGATTGACTCT
TCTGCATCGATTGCTTCTGTTGTTCCAATTAACAATCCACCTGCTGTGTCCCCAACGTCGTCGAGGTTCTCGACA
TTGGTCTCGCCGCCTTTCACCATCTCTCCCGCGGCTGAGTCGCCGTTGTCGTCGTCGAGCTCCTCTACGCTCCTC
CCATCAGCCACGGTTGCCAATACAACCCCTCCAAACGGTGCCACTACTTGTAACATCTCAAGTGCCGCCAATATC
TTCATTGCAACTACAATTCTGTTCCTCGTGATGGCTTTCTAA
Gene >AgabiH97|116950
ATGTACCCCTGTCTCTTCCTTCTCCTCGCCCTCGACGCGATCACGCTCGTCAATGCTGGACTTTACGTATGTCGA
GTCCCTCCTTCAATCGCCCATGTAGCACGCCACAACTGTTCCTTCTCAGGTCGTCAAACCTCTTCTGGGTTCAAC
CTGTCATGCCGGAAAGCCATGCACTGTTGATTGGCTTGATGACGGCACCAATCCGCTCTTAACAGCAATCGGCGT
CGTCGACGTCGGACTTTACCATGGAAAACAGGTCCATACTTCTCTCTCTCTCTCTCTTCGCGTCCACTCGCTGAT
AAATTGGCTGTTTTAGCAATTGGTACAAACCATCCGACCCGTGAACGTCGCCACAGTTCACTCCCTAACATTTAC
CGTATGCCAAATCCGCCTTTGACGATAATATATTCCTGAATCTCAAATATAGCCTATCCCTGAAGCTGGACCTAA
CTCGGATAGCTAGTATGCGTTCCTACTTGTCATTTCATTAAATCTTCTAATATGGAGTTTACAGTTACCTTTCAT
TGGTCTCTACATCCCTTTCACAAAATGCGTCTCAGCCCTATGCAGCTTTCTCTTCTTTCTTTCGGTTTGCTTTTT
ACGCTTTCACAACTATCATCTCTCTAATCTTTTTACCTCTAGGCTGGACGGAATGACAGGATCTTTTGACACTCC
CAACTCCGCGGCTACCACATCCTTTCCCGTTCCATCCTCAGTTGCAACGAGTGGTAAACCTCTTCCGACCGATAC
CGTATTATCCACTATAACTGTCGGTGTGATTTCCTCTGCCTCTTCAAGCTCAATATCGTCGCATTCCGCGCATAC
AACGACTTCGTTAAGACAGTCGAGTGCTGCGGCTCCAACGATTGACTCTTCTGCATCGATTGCTTCTGTTGTTCC
AATTAACAATCCACCTGCTGTGTCCCCAACGTCGTCGAGGTTCTCGACATTGGTCTCGCCGCCTTTCACCATCTC
TCCCGCGGCTGAGTCGCCGTTGTCGTCGTCGAGCTCCTCTACGCTCCTCCCATCAGCCACGGTTGCCAATACAAC
CCCTCCAAACGGTGCCACTACTTGTAACATCTCAAGTGCCGCCAATATCTTCATTGCAACTACAATTCTGTTCCT
CGTGATGGCTTTCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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