Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|116910
Gene name
Locationscaffold_9:860667..861544
Strand+
Gene length (bp)877
Transcript length (bp)669
Coding sequence length (bp)669
Protein length (aa) 223

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10342 Kre9_KNH Kre9/KNH-like N-terminal Ig-like domain 1.7E-09 24 118

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|116910
MFFNSFALLALAASPTLANVFITNPTSSTTFHGGQQATLNWQDDSKAPSLQDMGNCTVAIYVGNALQQTSLQTIV
ESVDVSKTSAIQFTPKPEIGPNSAEYFIRIDSLTAKDSASPQYPAMSFSAKFKMDGMTGTFSSAIEAQIAGQSTA
PLAGQTAPPAGATSPTGGASKTGGASSTSALQRTAASGSATPSNTASDNGAFSVKAGWAGILSSVFVYVAVL*
Coding >AgabiH97|116910
ATGTTCTTCAACTCCTTCGCTCTTCTCGCTCTTGCCGCTTCTCCCACTTTGGCCAACGTCTTTATCACAAACCCA
ACTTCTTCTACTACTTTCCACGGTGGCCAACAAGCTACCCTCAACTGGCAAGATGATAGCAAGGCTCCTTCCCTC
CAAGATATGGGCAATTGTACGGTCGCTATCTACGTCGGTAACGCCCTGCAACAGACTTCGTTGCAAACCATTGTC
GAGAGTGTGGACGTTTCCAAAACTTCCGCTATCCAATTCACTCCCAAACCCGAGATTGGTCCTAACAGCGCTGAA
TACTTCATTCGGATTGACTCGCTTACCGCAAAGGATAGCGCAAGCCCACAATATCCTGCCATGTCCTTTTCAGCC
AAGTTCAAAATGGATGGGATGACGGGAACTTTCAGCAGTGCAATTGAAGCTCAGATCGCTGGTCAATCCACTGCC
CCTCTTGCTGGTCAGACAGCTCCTCCAGCTGGTGCGACTTCTCCAACCGGCGGTGCTTCCAAAACTGGTGGTGCT
TCTTCAACTAGTGCTCTTCAGCGCACTGCTGCATCCGGATCGGCTACTCCCTCTAACACTGCCAGTGACAACGGT
GCTTTTAGCGTCAAGGCTGGATGGGCTGGTATACTATCAAGTGTATTTGTTTATGTCGCTGTCCTCTAA
Transcript >AgabiH97|116910
ATGTTCTTCAACTCCTTCGCTCTTCTCGCTCTTGCCGCTTCTCCCACTTTGGCCAACGTCTTTATCACAAACCCA
ACTTCTTCTACTACTTTCCACGGTGGCCAACAAGCTACCCTCAACTGGCAAGATGATAGCAAGGCTCCTTCCCTC
CAAGATATGGGCAATTGTACGGTCGCTATCTACGTCGGTAACGCCCTGCAACAGACTTCGTTGCAAACCATTGTC
GAGAGTGTGGACGTTTCCAAAACTTCCGCTATCCAATTCACTCCCAAACCCGAGATTGGTCCTAACAGCGCTGAA
TACTTCATTCGGATTGACTCGCTTACCGCAAAGGATAGCGCAAGCCCACAATATCCTGCCATGTCCTTTTCAGCC
AAGTTCAAAATGGATGGGATGACGGGAACTTTCAGCAGTGCAATTGAAGCTCAGATCGCTGGTCAATCCACTGCC
CCTCTTGCTGGTCAGACAGCTCCTCCAGCTGGTGCGACTTCTCCAACCGGCGGTGCTTCCAAAACTGGTGGTGCT
TCTTCAACTAGTGCTCTTCAGCGCACTGCTGCATCCGGATCGGCTACTCCCTCTAACACTGCCAGTGACAACGGT
GCTTTTAGCGTCAAGGCTGGATGGGCTGGTATACTATCAAGTGTATTTGTTTATGTCGCTGTCCTCTAA
Gene >AgabiH97|116910
ATGTTCTTCAACTCCTTCGCTCTTCTCGCTCTTGCCGCTTCTCCCACTTTGGCCAACGTCTTTGTATGGATGACA
GAAATTTTTTGGAAAAGAGAATTTAAACATTGACACGTCGTCTAGATCACAAACCCAACTTCTTCTACTACTTTC
CACGGTGGCCAACAAGCTACCCTCAACTGGCAAGATGATAGCAAGGCTCCTTCCCTCCAAGATATGGGCAATTGT
ACGGTCGCTATCTACGTCGGTAACGCCCTGCAACAGGTACGTTCTTGCTTTTTACACGAGAATCCCCTTTTTTGA
CGTGTCAAAGACTTCGTTGCAAACCATTGTCGAGAGTGTGGACGTTTCCAAAACTTCCGCTATCCAATTCACTCC
CAAACCCGAGATTGGTCCTAACAGCGCTGAATAGTGAGTAACTCTCTCATGATGACCTTGAATCGATCTCACGCG
CTTTCAGCTTCATTCGGATTGACTCGCTTACCGCAAAGGATAGCGCAAGCCCACAATATCCTGCCATGTCCTTTT
CAGCCAAGTTCAAGTGAGTCAAATTCCGTGCACATCGGAATATAGTGGCTGACCTCTTGTCTTTAGAATGGATGG
GATGACGGGAACTTTCAGCAGTGCAATTGAAGCTCAGATCGCTGGTCAATCCACTGCCCCTCTTGCTGGTCAGAC
AGCTCCTCCAGCTGGTGCGACTTCTCCAACCGGCGGTGCTTCCAAAACTGGTGGTGCTTCTTCAACTAGTGCTCT
TCAGCGCACTGCTGCATCCGGATCGGCTACTCCCTCTAACACTGCCAGTGACAACGGTGCTTTTAGCGTCAAGGC
TGGATGGGCTGGTATACTATCAAGTGTATTTGTTTATGTCGCTGTCCTCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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