Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|116730
Gene name
Locationscaffold_9:809237..811900
Strand+
Gene length (bp)2663
Transcript length (bp)1587
Coding sequence length (bp)1587
Protein length (aa) 529

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07690 MFS_1 Major Facilitator Superfamily 3.6E-35 84 451

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9P6J0|YHDC_SCHPO Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 67 512 2.0E-52
sp|Q9US37|YFZ4_SCHPO Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 46 506 6.0E-48
sp|Q10097|YAOI_SCHPO Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 56 497 8.0E-44
sp|Q9US44|YIZG_SCHPO Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 60 527 2.0E-43
sp|P70786|TUB3_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 65 495 2.0E-42
[Show all]
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Swissprot ID Swissprot Description Start End E-value
sp|Q9P6J0|YHDC_SCHPO Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 67 512 2.0E-52
sp|Q9US37|YFZ4_SCHPO Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 46 506 6.0E-48
sp|Q10097|YAOI_SCHPO Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 56 497 8.0E-44
sp|Q9US44|YIZG_SCHPO Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 60 527 2.0E-43
sp|P70786|TUB3_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 65 495 2.0E-42
sp|Q44470|TUB4_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 66 477 2.0E-39
sp|P53322|TNA1_YEAST High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 69 527 6.0E-33
sp|O94491|YC7A_SCHPO Uncharacterized transporter C417.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC417.10 PE=3 SV=1 47 524 1.0E-30
sp|Q88FY6|NICT_PSEPK Putative metabolite transport protein NicT OS=Pseudomonas putida (strain KT2440) GN=nicT PE=2 SV=1 52 477 2.0E-29
sp|Q05181|PHT1_PSEPU Phthalate transporter OS=Pseudomonas putida GN=pht1 PE=3 SV=1 62 399 4.0E-25
sp|O74923|YJ7D_SCHPO Uncharacterized transporter C757.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC757.13 PE=3 SV=1 64 526 9.0E-24
sp|B5BP49|YP55_SCHPO Uncharacterized transporter C460.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC460.05 PE=3 SV=1 14 526 2.0E-23
sp|P76470|RHMT_ECOLI Inner membrane transport protein RhmT OS=Escherichia coli (strain K12) GN=rhmT PE=1 SV=2 72 373 4.0E-23
sp|P40445|YIQ6_YEAST Uncharacterized transporter YIL166C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIL166C PE=1 SV=1 64 507 8.0E-23
sp|P15365|DAL5_YEAST Allantoate permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAL5 PE=1 SV=1 2 342 9.0E-23
sp|Q07904|THI73_YEAST Thiamine pathway transporter THI73 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI73 PE=1 SV=1 67 456 2.0E-20
sp|O43000|LIZ1_SCHPO Pantothenate transporter liz1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=liz1 PE=2 SV=2 69 517 9.0E-20
sp|O94572|YGDF_SCHPO Uncharacterized transporter C1773.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1773.15 PE=3 SV=1 70 512 9.0E-16
sp|Q9C0U9|YQD3_SCHPO Uncharacterized transporter PB1C11.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCPB1C11.03 PE=1 SV=1 45 516 1.0E-15
sp|Q9C0V8|YHJ1_SCHPO Uncharacterized transporter PB10D8.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBPB10D8.01 PE=3 SV=1 57 525 7.0E-14
sp|P39709|SEO1_YEAST Probable transporter SEO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEO1 PE=1 SV=1 63 426 8.0E-12
sp|P25621|FEN2_YEAST Pantothenate transporter FEN2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FEN2 PE=1 SV=1 66 330 2.0E-11
sp|O13880|VHT1_SCHPO Vitamin H transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vht1 PE=2 SV=1 63 508 6.0E-11
sp|P0CF20|YO163_YEAST Putative uncharacterized transporter YOL163W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOL163W PE=5 SV=1 157 300 8.0E-11
sp|P53241|VHT1_YEAST Vitamin H transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VHT1 PE=1 SV=1 51 384 2.0E-10
sp|Q12235|YCT1_YEAST High affinity cysteine transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCT1 PE=1 SV=1 11 313 1.0E-09
sp|Q2QWW7|PHT47_ORYSJ Probable anion transporter 7 OS=Oryza sativa subsp. japonica GN=PHT4;7 PE=2 SV=1 73 248 2.0E-06
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GO

GO Term Description Terminal node
GO:0055085 transmembrane transport Yes
GO:0022857 transmembrane transporter activity Yes
GO:0051179 localization No
GO:0003674 molecular_function No
GO:0051234 establishment of localization No
GO:0008150 biological_process No
GO:0009987 cellular process No
GO:0005215 transporter activity No
GO:0006810 transport No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 53 0.45

Transmembrane Domains

Domain # Start End Length
1 144 166 22
2 176 198 22
3 205 227 22
4 242 264 22
5 310 332 22
6 342 361 19
7 374 396 22
8 401 423 22
9 435 457 22
10 467 489 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|116730
MSTKSTSSTEIKEVDVSKAAHDEQASDGTLHQSGLGPPQRGHFFSPLDPTWAEAVHRDAETVQYTAEEERRVRRK
IDNRILPLIIISYLCNQFDRTNVGNAHVIDAFNDNYEITTNQKWTIALSIFYVGYCTLEMPANVLQRHIGANRFF
FLSLTFWGLSSLSLTYAKGYAALLVLRVLMGIGEAGYYAGVIYYMSFWYTRSEMALRITLGMTGTVPGVIGGLLA
FGLVRAHTSALAGWQFLFLIEAIPTLIMGTCDLFFLPAFPFAASFLTQREKAIAQARLNCDHKPQSHGGMTGWQG
FKAIISDPNAWLFMTTYASFNVGVATISYFLPTLIRDLGFSSINAQGLTVAPYAVGWFMVIIQAWHSDRTRDRGY
HIMFSAAISFTGYIILATSVQKSVGAAYFALFLVVGGNFSLFPLVMSWATNTFSPTSKRGVGTAFIVSISNCVSI
ASPQIYFDSEDNFRKGHAIAASCLFISILAAFTARTRLNALNKRNKKILEEMAQSDEKIVEDESVEIWDNDPRYV
FLT*
Coding >AgabiH97|116730
ATGTCAACCAAGTCCACTAGTTCGACAGAAATTAAAGAAGTCGATGTGTCCAAAGCCGCACACGATGAGCAAGCT
TCTGATGGAACATTACATCAGAGTGGATTAGGGCCTCCTCAACGAGGGCATTTCTTCTCTCCTTTAGACCCGACT
TGGGCAGAGGCTGTACATCGTGATGCTGAGACTGTGCAATATACTGCTGAAGAGGAGAGACGCGTTCGGCGCAAG
ATTGACAACAGGATTTTACCGCTCATCATCATTAGTTACCTGTGCAATCAATTTGATCGCACAAACGTTGGCAAC
GCGCACGTCATAGATGCCTTCAACGACAACTATGAAATCACCACGAATCAGAAATGGACCATCGCATTAAGTATA
TTCTACGTGGGATACTGCACACTCGAGATGCCCGCTAACGTCCTACAGCGACATATCGGCGCGAATCGATTTTTC
TTCCTTTCCTTGACGTTTTGGGGTCTCTCATCCCTTTCGCTTACATATGCCAAAGGTTATGCAGCACTCCTGGTG
CTACGTGTACTTATGGGGATCGGAGAAGCAGGCTATTATGCCGGAGTGATCTATTATATGTCATTCTGGTATACA
CGGAGCGAAATGGCCTTACGAATCACTTTGGGAATGACTGGAACCGTTCCAGGAGTTATTGGTGGTCTACTCGCA
TTCGGGTTGGTCCGCGCGCATACCTCAGCGCTGGCTGGATGGCAATTTCTCTTCCTTATTGAAGCAATTCCTACA
CTGATTATGGGAACCTGTGATCTCTTTTTTCTCCCTGCCTTTCCCTTTGCTGCCTCTTTTTTAACCCAGCGCGAA
AAGGCGATCGCGCAAGCAAGGTTGAACTGTGATCATAAACCCCAGTCACATGGTGGGATGACGGGATGGCAAGGT
TTCAAAGCTATTATATCGGATCCGAACGCCTGGCTTTTTATGACCACCTACGCTAGCTTTAATGTCGGCGTTGCA
ACGATTTCATACTTCTTGCCTACGCTAATTAGAGATCTTGGATTCTCTTCAATCAATGCACAAGGGCTTACAGTC
GCACCCTATGCAGTAGGCTGGTTTATGGTCATTATCCAAGCCTGGCATAGTGATCGTACTCGAGACCGGGGATAC
CACATCATGTTCTCAGCTGCGATTTCTTTTACAGGTTATATCATCCTTGCAACATCTGTACAGAAAAGTGTCGGT
GCTGCTTACTTTGCATTGTTTCTTGTCGTTGGAGGAAACTTTAGTCTCTTCCCTTTGGTAATGTCCTGGGCTACA
AATACTTTTTCTCCTACATCTAAACGTGGTGTTGGAACGGCGTTTATTGTCTCGATATCCAATTGTGTTTCTATT
GCCTCACCTCAAATTTACTTTGACTCCGAGGATAATTTTCGCAAAGGTCATGCGATAGCCGCTAGTTGTCTATTC
ATCTCAATCCTTGCTGCCTTTACTGCTCGTACTAGGTTGAACGCGTTAAACAAGAGGAACAAAAAGATACTGGAG
GAGATGGCCCAATCTGACGAAAAAATAGTGGAAGATGAGAGCGTTGAAATCTGGGATAATGATCCCCGTTATGTA
TTCTTAACCTGA
Transcript >AgabiH97|116730
ATGTCAACCAAGTCCACTAGTTCGACAGAAATTAAAGAAGTCGATGTGTCCAAAGCCGCACACGATGAGCAAGCT
TCTGATGGAACATTACATCAGAGTGGATTAGGGCCTCCTCAACGAGGGCATTTCTTCTCTCCTTTAGACCCGACT
TGGGCAGAGGCTGTACATCGTGATGCTGAGACTGTGCAATATACTGCTGAAGAGGAGAGACGCGTTCGGCGCAAG
ATTGACAACAGGATTTTACCGCTCATCATCATTAGTTACCTGTGCAATCAATTTGATCGCACAAACGTTGGCAAC
GCGCACGTCATAGATGCCTTCAACGACAACTATGAAATCACCACGAATCAGAAATGGACCATCGCATTAAGTATA
TTCTACGTGGGATACTGCACACTCGAGATGCCCGCTAACGTCCTACAGCGACATATCGGCGCGAATCGATTTTTC
TTCCTTTCCTTGACGTTTTGGGGTCTCTCATCCCTTTCGCTTACATATGCCAAAGGTTATGCAGCACTCCTGGTG
CTACGTGTACTTATGGGGATCGGAGAAGCAGGCTATTATGCCGGAGTGATCTATTATATGTCATTCTGGTATACA
CGGAGCGAAATGGCCTTACGAATCACTTTGGGAATGACTGGAACCGTTCCAGGAGTTATTGGTGGTCTACTCGCA
TTCGGGTTGGTCCGCGCGCATACCTCAGCGCTGGCTGGATGGCAATTTCTCTTCCTTATTGAAGCAATTCCTACA
CTGATTATGGGAACCTGTGATCTCTTTTTTCTCCCTGCCTTTCCCTTTGCTGCCTCTTTTTTAACCCAGCGCGAA
AAGGCGATCGCGCAAGCAAGGTTGAACTGTGATCATAAACCCCAGTCACATGGTGGGATGACGGGATGGCAAGGT
TTCAAAGCTATTATATCGGATCCGAACGCCTGGCTTTTTATGACCACCTACGCTAGCTTTAATGTCGGCGTTGCA
ACGATTTCATACTTCTTGCCTACGCTAATTAGAGATCTTGGATTCTCTTCAATCAATGCACAAGGGCTTACAGTC
GCACCCTATGCAGTAGGCTGGTTTATGGTCATTATCCAAGCCTGGCATAGTGATCGTACTCGAGACCGGGGATAC
CACATCATGTTCTCAGCTGCGATTTCTTTTACAGGTTATATCATCCTTGCAACATCTGTACAGAAAAGTGTCGGT
GCTGCTTACTTTGCATTGTTTCTTGTCGTTGGAGGAAACTTTAGTCTCTTCCCTTTGGTAATGTCCTGGGCTACA
AATACTTTTTCTCCTACATCTAAACGTGGTGTTGGAACGGCGTTTATTGTCTCGATATCCAATTGTGTTTCTATT
GCCTCACCTCAAATTTACTTTGACTCCGAGGATAATTTTCGCAAAGGTCATGCGATAGCCGCTAGTTGTCTATTC
ATCTCAATCCTTGCTGCCTTTACTGCTCGTACTAGGTTGAACGCGTTAAACAAGAGGAACAAAAAGATACTGGAG
GAGATGGCCCAATCTGACGAAAAAATAGTGGAAGATGAGAGCGTTGAAATCTGGGATAATGATCCCCGTTATGTA
TTCTTAACCTGA
Gene >AgabiH97|116730
ATGTCAACCAAGTCCACTAGTTCGACAGAAATTAAAGAAGTCGATGTGTCCAAAGCCGCACACGATGAGCAAGCT
TCTGATGGAACATTACATCAGAGTGGATTAGGGCCTCCTCAACGAGGGCATTTCTTCTCTCCTTTAGACCCGACT
TGGGCAGAGGCTGTACATCGTGATGCTGAGACTGTGCAATATACTGCTGAAGAGGAGGTTTGTTTCCAAATTACC
TCAGGATTGCTTTAATTTGGAAAACGGGAACTGATCTCCTTCAAGAGACGCGTTCGGCGCAAGATTGACAACAGG
ATTTTACCGCTCATCATCATTAGGTACGCCTTCTAAATTTCTTGTATTGGCAATGATTGACGGCGCAATAGTTAC
CTGTGTATGTCAACATGCAGCTTCTAGCTTTTCTAAGAATTTCAGCTGACAGATGCAATATACATACTAGGCAAT
CAATTTGGTGAGATGCCGAGTCCTTTTTTCTTTCAACTTGCTTAATCCTAATGTCATTATAGATCGCACAAACGT
GTACGTGTTTCCGAAGTCCTTCACAGATAGATTCTCATGTTCCTACAGTGGCAACGCGCACGTCATAGATGCCTT
CAACGACAACTATGTATGTTTCTTGACCATTGCAACCTCAGTTTTCGTTAATGCGGTCATCAGGAAATCACCACG
AATCAGAAATGGACCATCGCATTAAGTATATTCTACGTGGGATACTGTAGGTTGCAACTGAGTCACACGCACAGT
AACTAATAATCATTAGGCACACTCGAGATGCCCGCTAACGGTATGAATTTCTACCCAAATTGTTAATAAAGGTCG
CAGAAATTAACCAATTTCAAAGTCCTACAGCGACATATCGGCGCGAATCGATTGTGAGTTCTTTACCTTTGAAAT
ATCCCTCGTATCTAAACCAAGTTCTTAATTTAGTTTCTTCCTTTCCTTGACGTTTTGGGGTCTCTCATCCCTTTC
GCTTACATATGCCAAAGGTTATGCAGCACTCCTGGTGCTACGGTGCGGAGTCTCTTGATTCTTCCACCTATCGCG
TTTCTCACAGTGCTAATCTATACAGTGTACTTATGGGGATCGGAGAAGCAGGCTATTATGCCGGAGTGATCTATT
ATATGTCATTCTGGTATACACGGTACGCAATTTTGATATTTACTCGAATCTATCGTCCTGAGGTGTTTGTAGGAG
CGAAATGGCCTTACGAATCACGTCAGTTAAGAAGCTTCGTTTTCTATTGGCCACTTTTGACAAGAAATTAGTTTG
GGAATGACTGGAACCGTTCCAGGAGTTATTGGTGTGCGTCATGTGTTCGACTTCATTACTGTTTGACTTCATTAT
TGGTGAACAGGGTCTACTCGCATTCGGGTTGGTCCGCGCGCATACCTCAGCGCTGGCTGGGTAAGTACAAGCATA
TAAACATAACCGCACGCTCATGTATTTCTTAGATGGCAATTTCTCTTCCTTGTAGGCACCTCATATCACTAAGGA
CGAGCTTGAAACTCAAAGACTGTCCTAGATTGAAGCAATTCCTACACTGATTATGGGAACCTGTGATCTCTTTTT
TCTCCCTGCCTTTCCCTTTGCTGCCTCTTTTTTAACCCAGCGCGAAAAGGCGATCGCGCAAGCAAGGTTGAACTG
TGATCATAAACCCCAGTCACATGGTGGGATGACGGGATGGCAAGGTTTCAAAGCTATTATATCGGATCCGAACGC
CTGGCTTTTTATGACCACCTACGCTAGCTGTATGTTTGCCTAGTTTTGAGATTTGCTGAAAATCTGACATTTTTC
AAGTTAATGTCGGCGTTGCAACGATTTCATACTTCTTGCCTACGGTACGCGCCGCTCCCGAATTACGGGTATCAG
CTTGTATTTCTTACGCCGTTTGCAGCTAATTAGAGATCTTGGATTCTCTTCAATCAATGCACAAGGGCTTACAGT
CGCACCCTATGCAGTAGGCTGGTTTATGGTCATTATCCAAGCCTGGCATAGTGATCGTACTCGAGACCGGGGATA
CCACATCATGTTCTCAGCTGCGATTTCTTTTACAGGTTATATCATCCTTGCAACATCTGTACAGAAAAGTGTCGG
TGCTGCTTACTTTGCATTGTTTCTTGTCGTTGGAGGAAACTTTAGTCTCTTCCCTTTGGTAATGTGAGTGACACT
CCGTCAGAGAATTTTATAGGGTCATTTTGCTAACCAATTGTTTAGGTCCTGGGCTACAAATACTTTTTCTCCTAC
ATCTAAACGTGGTGTTGGAACGGCGTTTATTGTCTCGATATCCAATTGTGTTTCTATGTAAGTCGGATGAGTATC
TACAATTTCAATCTTATTCTGATCGTCCGGCTTTTATACTAGTGCCTCACCTCAAATTTACTTTGACTCCGAGGA
TAATTTTCGCAAAGGTCATGCGATAGCCGCTAGGTACGTGGCGTTGGAATTATCGTCATCTTCGCCACCGTAACC
AACTCGTATTTTCTAGTTGTCTATTCATCTCAATCCTTGCTGCCTTTACTGCTCGTACTAGGTTGAACGCGTTAA
ACAAGAGGAACAAAAAGATACTGGAGGAGATGGCCCAATCTGACGAAAAAATAGTGGAAGATGAGAGCGTTGAAA
TCTGGGATAATGATCCCCGTTATGTATTCTTAACCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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