© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | AgabiH97|116730 |
| Gene name | |
| Location | scaffold_9:809237..811900 |
| Strand | + |
| Gene length (bp) | 2663 |
| Transcript length (bp) | 1587 |
| Coding sequence length (bp) | 1587 |
| Protein length (aa) | 529 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 3.6E-35 | 84 | 451 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9P6J0|YHDC_SCHPO | Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 | 67 | 512 | 2.0E-52 |
| sp|Q9US37|YFZ4_SCHPO | Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 | 46 | 506 | 6.0E-48 |
| sp|Q10097|YAOI_SCHPO | Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 | 56 | 497 | 8.0E-44 |
| sp|Q9US44|YIZG_SCHPO | Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 | 60 | 527 | 2.0E-43 |
| sp|P70786|TUB3_AGRVI | Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 | 65 | 495 | 2.0E-42 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9P6J0|YHDC_SCHPO | Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 | 67 | 512 | 2.0E-52 |
| sp|Q9US37|YFZ4_SCHPO | Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 | 46 | 506 | 6.0E-48 |
| sp|Q10097|YAOI_SCHPO | Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 | 56 | 497 | 8.0E-44 |
| sp|Q9US44|YIZG_SCHPO | Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 | 60 | 527 | 2.0E-43 |
| sp|P70786|TUB3_AGRVI | Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 | 65 | 495 | 2.0E-42 |
| sp|Q44470|TUB4_AGRVI | Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 | 66 | 477 | 2.0E-39 |
| sp|P53322|TNA1_YEAST | High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 | 69 | 527 | 6.0E-33 |
| sp|O94491|YC7A_SCHPO | Uncharacterized transporter C417.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC417.10 PE=3 SV=1 | 47 | 524 | 1.0E-30 |
| sp|Q88FY6|NICT_PSEPK | Putative metabolite transport protein NicT OS=Pseudomonas putida (strain KT2440) GN=nicT PE=2 SV=1 | 52 | 477 | 2.0E-29 |
| sp|Q05181|PHT1_PSEPU | Phthalate transporter OS=Pseudomonas putida GN=pht1 PE=3 SV=1 | 62 | 399 | 4.0E-25 |
| sp|O74923|YJ7D_SCHPO | Uncharacterized transporter C757.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC757.13 PE=3 SV=1 | 64 | 526 | 9.0E-24 |
| sp|B5BP49|YP55_SCHPO | Uncharacterized transporter C460.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC460.05 PE=3 SV=1 | 14 | 526 | 2.0E-23 |
| sp|P76470|RHMT_ECOLI | Inner membrane transport protein RhmT OS=Escherichia coli (strain K12) GN=rhmT PE=1 SV=2 | 72 | 373 | 4.0E-23 |
| sp|P40445|YIQ6_YEAST | Uncharacterized transporter YIL166C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIL166C PE=1 SV=1 | 64 | 507 | 8.0E-23 |
| sp|P15365|DAL5_YEAST | Allantoate permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAL5 PE=1 SV=1 | 2 | 342 | 9.0E-23 |
| sp|Q07904|THI73_YEAST | Thiamine pathway transporter THI73 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI73 PE=1 SV=1 | 67 | 456 | 2.0E-20 |
| sp|O43000|LIZ1_SCHPO | Pantothenate transporter liz1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=liz1 PE=2 SV=2 | 69 | 517 | 9.0E-20 |
| sp|O94572|YGDF_SCHPO | Uncharacterized transporter C1773.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1773.15 PE=3 SV=1 | 70 | 512 | 9.0E-16 |
| sp|Q9C0U9|YQD3_SCHPO | Uncharacterized transporter PB1C11.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCPB1C11.03 PE=1 SV=1 | 45 | 516 | 1.0E-15 |
| sp|Q9C0V8|YHJ1_SCHPO | Uncharacterized transporter PB10D8.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBPB10D8.01 PE=3 SV=1 | 57 | 525 | 7.0E-14 |
| sp|P39709|SEO1_YEAST | Probable transporter SEO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEO1 PE=1 SV=1 | 63 | 426 | 8.0E-12 |
| sp|P25621|FEN2_YEAST | Pantothenate transporter FEN2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FEN2 PE=1 SV=1 | 66 | 330 | 2.0E-11 |
| sp|O13880|VHT1_SCHPO | Vitamin H transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vht1 PE=2 SV=1 | 63 | 508 | 6.0E-11 |
| sp|P0CF20|YO163_YEAST | Putative uncharacterized transporter YOL163W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOL163W PE=5 SV=1 | 157 | 300 | 8.0E-11 |
| sp|P53241|VHT1_YEAST | Vitamin H transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VHT1 PE=1 SV=1 | 51 | 384 | 2.0E-10 |
| sp|Q12235|YCT1_YEAST | High affinity cysteine transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCT1 PE=1 SV=1 | 11 | 313 | 1.0E-09 |
| sp|Q2QWW7|PHT47_ORYSJ | Probable anion transporter 7 OS=Oryza sativa subsp. japonica GN=PHT4;7 PE=2 SV=1 | 73 | 248 | 2.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0051179 | localization | No |
| GO:0003674 | molecular_function | No |
| GO:0051234 | establishment of localization | No |
| GO:0008150 | biological_process | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 53 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 144 | 166 | 22 |
| 2 | 176 | 198 | 22 |
| 3 | 205 | 227 | 22 |
| 4 | 242 | 264 | 22 |
| 5 | 310 | 332 | 22 |
| 6 | 342 | 361 | 19 |
| 7 | 374 | 396 | 22 |
| 8 | 401 | 423 | 22 |
| 9 | 435 | 457 | 22 |
| 10 | 467 | 489 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|116730 MSTKSTSSTEIKEVDVSKAAHDEQASDGTLHQSGLGPPQRGHFFSPLDPTWAEAVHRDAETVQYTAEEERRVRRK IDNRILPLIIISYLCNQFDRTNVGNAHVIDAFNDNYEITTNQKWTIALSIFYVGYCTLEMPANVLQRHIGANRFF FLSLTFWGLSSLSLTYAKGYAALLVLRVLMGIGEAGYYAGVIYYMSFWYTRSEMALRITLGMTGTVPGVIGGLLA FGLVRAHTSALAGWQFLFLIEAIPTLIMGTCDLFFLPAFPFAASFLTQREKAIAQARLNCDHKPQSHGGMTGWQG FKAIISDPNAWLFMTTYASFNVGVATISYFLPTLIRDLGFSSINAQGLTVAPYAVGWFMVIIQAWHSDRTRDRGY HIMFSAAISFTGYIILATSVQKSVGAAYFALFLVVGGNFSLFPLVMSWATNTFSPTSKRGVGTAFIVSISNCVSI ASPQIYFDSEDNFRKGHAIAASCLFISILAAFTARTRLNALNKRNKKILEEMAQSDEKIVEDESVEIWDNDPRYV FLT* |
| Coding | >AgabiH97|116730 ATGTCAACCAAGTCCACTAGTTCGACAGAAATTAAAGAAGTCGATGTGTCCAAAGCCGCACACGATGAGCAAGCT TCTGATGGAACATTACATCAGAGTGGATTAGGGCCTCCTCAACGAGGGCATTTCTTCTCTCCTTTAGACCCGACT TGGGCAGAGGCTGTACATCGTGATGCTGAGACTGTGCAATATACTGCTGAAGAGGAGAGACGCGTTCGGCGCAAG ATTGACAACAGGATTTTACCGCTCATCATCATTAGTTACCTGTGCAATCAATTTGATCGCACAAACGTTGGCAAC GCGCACGTCATAGATGCCTTCAACGACAACTATGAAATCACCACGAATCAGAAATGGACCATCGCATTAAGTATA TTCTACGTGGGATACTGCACACTCGAGATGCCCGCTAACGTCCTACAGCGACATATCGGCGCGAATCGATTTTTC TTCCTTTCCTTGACGTTTTGGGGTCTCTCATCCCTTTCGCTTACATATGCCAAAGGTTATGCAGCACTCCTGGTG CTACGTGTACTTATGGGGATCGGAGAAGCAGGCTATTATGCCGGAGTGATCTATTATATGTCATTCTGGTATACA CGGAGCGAAATGGCCTTACGAATCACTTTGGGAATGACTGGAACCGTTCCAGGAGTTATTGGTGGTCTACTCGCA TTCGGGTTGGTCCGCGCGCATACCTCAGCGCTGGCTGGATGGCAATTTCTCTTCCTTATTGAAGCAATTCCTACA CTGATTATGGGAACCTGTGATCTCTTTTTTCTCCCTGCCTTTCCCTTTGCTGCCTCTTTTTTAACCCAGCGCGAA AAGGCGATCGCGCAAGCAAGGTTGAACTGTGATCATAAACCCCAGTCACATGGTGGGATGACGGGATGGCAAGGT TTCAAAGCTATTATATCGGATCCGAACGCCTGGCTTTTTATGACCACCTACGCTAGCTTTAATGTCGGCGTTGCA ACGATTTCATACTTCTTGCCTACGCTAATTAGAGATCTTGGATTCTCTTCAATCAATGCACAAGGGCTTACAGTC GCACCCTATGCAGTAGGCTGGTTTATGGTCATTATCCAAGCCTGGCATAGTGATCGTACTCGAGACCGGGGATAC CACATCATGTTCTCAGCTGCGATTTCTTTTACAGGTTATATCATCCTTGCAACATCTGTACAGAAAAGTGTCGGT GCTGCTTACTTTGCATTGTTTCTTGTCGTTGGAGGAAACTTTAGTCTCTTCCCTTTGGTAATGTCCTGGGCTACA AATACTTTTTCTCCTACATCTAAACGTGGTGTTGGAACGGCGTTTATTGTCTCGATATCCAATTGTGTTTCTATT GCCTCACCTCAAATTTACTTTGACTCCGAGGATAATTTTCGCAAAGGTCATGCGATAGCCGCTAGTTGTCTATTC ATCTCAATCCTTGCTGCCTTTACTGCTCGTACTAGGTTGAACGCGTTAAACAAGAGGAACAAAAAGATACTGGAG GAGATGGCCCAATCTGACGAAAAAATAGTGGAAGATGAGAGCGTTGAAATCTGGGATAATGATCCCCGTTATGTA TTCTTAACCTGA |
| Transcript | >AgabiH97|116730 ATGTCAACCAAGTCCACTAGTTCGACAGAAATTAAAGAAGTCGATGTGTCCAAAGCCGCACACGATGAGCAAGCT TCTGATGGAACATTACATCAGAGTGGATTAGGGCCTCCTCAACGAGGGCATTTCTTCTCTCCTTTAGACCCGACT TGGGCAGAGGCTGTACATCGTGATGCTGAGACTGTGCAATATACTGCTGAAGAGGAGAGACGCGTTCGGCGCAAG ATTGACAACAGGATTTTACCGCTCATCATCATTAGTTACCTGTGCAATCAATTTGATCGCACAAACGTTGGCAAC GCGCACGTCATAGATGCCTTCAACGACAACTATGAAATCACCACGAATCAGAAATGGACCATCGCATTAAGTATA TTCTACGTGGGATACTGCACACTCGAGATGCCCGCTAACGTCCTACAGCGACATATCGGCGCGAATCGATTTTTC TTCCTTTCCTTGACGTTTTGGGGTCTCTCATCCCTTTCGCTTACATATGCCAAAGGTTATGCAGCACTCCTGGTG CTACGTGTACTTATGGGGATCGGAGAAGCAGGCTATTATGCCGGAGTGATCTATTATATGTCATTCTGGTATACA CGGAGCGAAATGGCCTTACGAATCACTTTGGGAATGACTGGAACCGTTCCAGGAGTTATTGGTGGTCTACTCGCA TTCGGGTTGGTCCGCGCGCATACCTCAGCGCTGGCTGGATGGCAATTTCTCTTCCTTATTGAAGCAATTCCTACA CTGATTATGGGAACCTGTGATCTCTTTTTTCTCCCTGCCTTTCCCTTTGCTGCCTCTTTTTTAACCCAGCGCGAA AAGGCGATCGCGCAAGCAAGGTTGAACTGTGATCATAAACCCCAGTCACATGGTGGGATGACGGGATGGCAAGGT TTCAAAGCTATTATATCGGATCCGAACGCCTGGCTTTTTATGACCACCTACGCTAGCTTTAATGTCGGCGTTGCA ACGATTTCATACTTCTTGCCTACGCTAATTAGAGATCTTGGATTCTCTTCAATCAATGCACAAGGGCTTACAGTC GCACCCTATGCAGTAGGCTGGTTTATGGTCATTATCCAAGCCTGGCATAGTGATCGTACTCGAGACCGGGGATAC CACATCATGTTCTCAGCTGCGATTTCTTTTACAGGTTATATCATCCTTGCAACATCTGTACAGAAAAGTGTCGGT GCTGCTTACTTTGCATTGTTTCTTGTCGTTGGAGGAAACTTTAGTCTCTTCCCTTTGGTAATGTCCTGGGCTACA AATACTTTTTCTCCTACATCTAAACGTGGTGTTGGAACGGCGTTTATTGTCTCGATATCCAATTGTGTTTCTATT GCCTCACCTCAAATTTACTTTGACTCCGAGGATAATTTTCGCAAAGGTCATGCGATAGCCGCTAGTTGTCTATTC ATCTCAATCCTTGCTGCCTTTACTGCTCGTACTAGGTTGAACGCGTTAAACAAGAGGAACAAAAAGATACTGGAG GAGATGGCCCAATCTGACGAAAAAATAGTGGAAGATGAGAGCGTTGAAATCTGGGATAATGATCCCCGTTATGTA TTCTTAACCTGA |
| Gene | >AgabiH97|116730 ATGTCAACCAAGTCCACTAGTTCGACAGAAATTAAAGAAGTCGATGTGTCCAAAGCCGCACACGATGAGCAAGCT TCTGATGGAACATTACATCAGAGTGGATTAGGGCCTCCTCAACGAGGGCATTTCTTCTCTCCTTTAGACCCGACT TGGGCAGAGGCTGTACATCGTGATGCTGAGACTGTGCAATATACTGCTGAAGAGGAGGTTTGTTTCCAAATTACC TCAGGATTGCTTTAATTTGGAAAACGGGAACTGATCTCCTTCAAGAGACGCGTTCGGCGCAAGATTGACAACAGG ATTTTACCGCTCATCATCATTAGGTACGCCTTCTAAATTTCTTGTATTGGCAATGATTGACGGCGCAATAGTTAC CTGTGTATGTCAACATGCAGCTTCTAGCTTTTCTAAGAATTTCAGCTGACAGATGCAATATACATACTAGGCAAT CAATTTGGTGAGATGCCGAGTCCTTTTTTCTTTCAACTTGCTTAATCCTAATGTCATTATAGATCGCACAAACGT GTACGTGTTTCCGAAGTCCTTCACAGATAGATTCTCATGTTCCTACAGTGGCAACGCGCACGTCATAGATGCCTT CAACGACAACTATGTATGTTTCTTGACCATTGCAACCTCAGTTTTCGTTAATGCGGTCATCAGGAAATCACCACG AATCAGAAATGGACCATCGCATTAAGTATATTCTACGTGGGATACTGTAGGTTGCAACTGAGTCACACGCACAGT AACTAATAATCATTAGGCACACTCGAGATGCCCGCTAACGGTATGAATTTCTACCCAAATTGTTAATAAAGGTCG CAGAAATTAACCAATTTCAAAGTCCTACAGCGACATATCGGCGCGAATCGATTGTGAGTTCTTTACCTTTGAAAT ATCCCTCGTATCTAAACCAAGTTCTTAATTTAGTTTCTTCCTTTCCTTGACGTTTTGGGGTCTCTCATCCCTTTC GCTTACATATGCCAAAGGTTATGCAGCACTCCTGGTGCTACGGTGCGGAGTCTCTTGATTCTTCCACCTATCGCG TTTCTCACAGTGCTAATCTATACAGTGTACTTATGGGGATCGGAGAAGCAGGCTATTATGCCGGAGTGATCTATT ATATGTCATTCTGGTATACACGGTACGCAATTTTGATATTTACTCGAATCTATCGTCCTGAGGTGTTTGTAGGAG CGAAATGGCCTTACGAATCACGTCAGTTAAGAAGCTTCGTTTTCTATTGGCCACTTTTGACAAGAAATTAGTTTG GGAATGACTGGAACCGTTCCAGGAGTTATTGGTGTGCGTCATGTGTTCGACTTCATTACTGTTTGACTTCATTAT TGGTGAACAGGGTCTACTCGCATTCGGGTTGGTCCGCGCGCATACCTCAGCGCTGGCTGGGTAAGTACAAGCATA TAAACATAACCGCACGCTCATGTATTTCTTAGATGGCAATTTCTCTTCCTTGTAGGCACCTCATATCACTAAGGA CGAGCTTGAAACTCAAAGACTGTCCTAGATTGAAGCAATTCCTACACTGATTATGGGAACCTGTGATCTCTTTTT TCTCCCTGCCTTTCCCTTTGCTGCCTCTTTTTTAACCCAGCGCGAAAAGGCGATCGCGCAAGCAAGGTTGAACTG TGATCATAAACCCCAGTCACATGGTGGGATGACGGGATGGCAAGGTTTCAAAGCTATTATATCGGATCCGAACGC CTGGCTTTTTATGACCACCTACGCTAGCTGTATGTTTGCCTAGTTTTGAGATTTGCTGAAAATCTGACATTTTTC AAGTTAATGTCGGCGTTGCAACGATTTCATACTTCTTGCCTACGGTACGCGCCGCTCCCGAATTACGGGTATCAG CTTGTATTTCTTACGCCGTTTGCAGCTAATTAGAGATCTTGGATTCTCTTCAATCAATGCACAAGGGCTTACAGT CGCACCCTATGCAGTAGGCTGGTTTATGGTCATTATCCAAGCCTGGCATAGTGATCGTACTCGAGACCGGGGATA CCACATCATGTTCTCAGCTGCGATTTCTTTTACAGGTTATATCATCCTTGCAACATCTGTACAGAAAAGTGTCGG TGCTGCTTACTTTGCATTGTTTCTTGTCGTTGGAGGAAACTTTAGTCTCTTCCCTTTGGTAATGTGAGTGACACT CCGTCAGAGAATTTTATAGGGTCATTTTGCTAACCAATTGTTTAGGTCCTGGGCTACAAATACTTTTTCTCCTAC ATCTAAACGTGGTGTTGGAACGGCGTTTATTGTCTCGATATCCAATTGTGTTTCTATGTAAGTCGGATGAGTATC TACAATTTCAATCTTATTCTGATCGTCCGGCTTTTATACTAGTGCCTCACCTCAAATTTACTTTGACTCCGAGGA TAATTTTCGCAAAGGTCATGCGATAGCCGCTAGGTACGTGGCGTTGGAATTATCGTCATCTTCGCCACCGTAACC AACTCGTATTTTCTAGTTGTCTATTCATCTCAATCCTTGCTGCCTTTACTGCTCGTACTAGGTTGAACGCGTTAA ACAAGAGGAACAAAAAGATACTGGAGGAGATGGCCCAATCTGACGAAAAAATAGTGGAAGATGAGAGCGTTGAAA TCTGGGATAATGATCCCCGTTATGTATTCTTAACCTGA |