© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | AgabiH97|116720 |
| Gene name | |
| Location | scaffold_9:805815..808674 |
| Strand | + |
| Gene length (bp) | 2859 |
| Transcript length (bp) | 1734 |
| Coding sequence length (bp) | 1734 |
| Protein length (aa) | 578 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 2.2E-30 | 119 | 499 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9P6J0|YHDC_SCHPO | Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 | 101 | 561 | 5.0E-49 |
| sp|Q9US37|YFZ4_SCHPO | Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 | 80 | 571 | 7.0E-46 |
| sp|Q10097|YAOI_SCHPO | Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 | 90 | 543 | 2.0E-41 |
| sp|Q9US44|YIZG_SCHPO | Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 | 94 | 576 | 1.0E-37 |
| sp|P70786|TUB3_AGRVI | Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 | 99 | 544 | 6.0E-36 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9P6J0|YHDC_SCHPO | Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 | 101 | 561 | 5.0E-49 |
| sp|Q9US37|YFZ4_SCHPO | Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 | 80 | 571 | 7.0E-46 |
| sp|Q10097|YAOI_SCHPO | Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 | 90 | 543 | 2.0E-41 |
| sp|Q9US44|YIZG_SCHPO | Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 | 94 | 576 | 1.0E-37 |
| sp|P70786|TUB3_AGRVI | Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 | 99 | 544 | 6.0E-36 |
| sp|Q44470|TUB4_AGRVI | Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 | 101 | 526 | 2.0E-34 |
| sp|P53322|TNA1_YEAST | High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 | 103 | 576 | 4.0E-30 |
| sp|O94491|YC7A_SCHPO | Uncharacterized transporter C417.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC417.10 PE=3 SV=1 | 81 | 573 | 5.0E-27 |
| sp|Q88FY6|NICT_PSEPK | Putative metabolite transport protein NicT OS=Pseudomonas putida (strain KT2440) GN=nicT PE=2 SV=1 | 86 | 526 | 6.0E-25 |
| sp|P15365|DAL5_YEAST | Allantoate permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAL5 PE=1 SV=1 | 37 | 391 | 4.0E-22 |
| sp|Q05181|PHT1_PSEPU | Phthalate transporter OS=Pseudomonas putida GN=pht1 PE=3 SV=1 | 96 | 448 | 4.0E-22 |
| sp|P76470|RHMT_ECOLI | Inner membrane transport protein RhmT OS=Escherichia coli (strain K12) GN=rhmT PE=1 SV=2 | 106 | 422 | 3.0E-20 |
| sp|O74923|YJ7D_SCHPO | Uncharacterized transporter C757.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC757.13 PE=3 SV=1 | 98 | 399 | 2.0E-19 |
| sp|B5BP49|YP55_SCHPO | Uncharacterized transporter C460.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC460.05 PE=3 SV=1 | 30 | 399 | 4.0E-19 |
| sp|P40445|YIQ6_YEAST | Uncharacterized transporter YIL166C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIL166C PE=1 SV=1 | 98 | 556 | 1.0E-18 |
| sp|Q07904|THI73_YEAST | Thiamine pathway transporter THI73 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI73 PE=1 SV=1 | 101 | 505 | 7.0E-17 |
| sp|O43000|LIZ1_SCHPO | Pantothenate transporter liz1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=liz1 PE=2 SV=2 | 103 | 339 | 2.0E-15 |
| sp|O94572|YGDF_SCHPO | Uncharacterized transporter C1773.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1773.15 PE=3 SV=1 | 104 | 389 | 6.0E-14 |
| sp|P25621|FEN2_YEAST | Pantothenate transporter FEN2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FEN2 PE=1 SV=1 | 102 | 379 | 6.0E-10 |
| sp|Q9C0V8|YHJ1_SCHPO | Uncharacterized transporter PB10D8.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBPB10D8.01 PE=3 SV=1 | 91 | 574 | 1.0E-09 |
| sp|P39709|SEO1_YEAST | Probable transporter SEO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEO1 PE=1 SV=1 | 38 | 557 | 1.0E-09 |
| sp|P0CF20|YO163_YEAST | Putative uncharacterized transporter YOL163W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOL163W PE=5 SV=1 | 218 | 349 | 4.0E-09 |
| sp|O13880|VHT1_SCHPO | Vitamin H transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vht1 PE=2 SV=1 | 97 | 530 | 2.0E-08 |
| sp|Q12235|YCT1_YEAST | High affinity cysteine transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCT1 PE=1 SV=1 | 45 | 362 | 1.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0051179 | localization | No |
| GO:0003674 | molecular_function | No |
| GO:0051234 | establishment of localization | No |
| GO:0008150 | biological_process | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 43 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 156 | 178 | 22 |
| 2 | 193 | 215 | 22 |
| 3 | 222 | 244 | 22 |
| 4 | 259 | 278 | 19 |
| 5 | 291 | 313 | 22 |
| 6 | 358 | 380 | 22 |
| 7 | 387 | 409 | 22 |
| 8 | 424 | 441 | 17 |
| 9 | 448 | 470 | 22 |
| 10 | 515 | 537 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|116720 MTLVERRLTISDTILDSPPDQNNVPMARALTGASIKFNSTSSTEIKEVDVSKTPHDQQASDGTLHQSGLGPPQRR HFFSPLDPTWAEAVHRDAETVQYTPEEERRVRRKIDNRVLPLVIISFLFNQFDRTNVGNAHVIDAFNDNYEITTN QKWTLALSIFYVGYCTLEMPANGINFLVKPRKLTNPTVLQRHIGANRFFFISLTFWGLSSLSFTYAKGYAALLVL RVLMGIGEAGYYAGVIYYMSFWYTRSEMALRITLGMTGTVPGALGGLLAFGLVRAHTSVLAGWQFLFLIEAIPTL IMGTCDLLFLPAFPFTASFLTQREKAIAQARLNCDHKPQSHGGMTGWQGFKAVISDPNAWLFMTIYASFNVGVAT ISYFLPTLIRDLGFSSINAQGLTVAPYVVGWFMVFIQSWHSDRTRDRGYHIMFSAALSCIGYIILATSVQKSVGA AYFALFLVVGGNFSLFPLVMSWATNTFSPTSKRGVGTAFIVSISNCISIASPQVYFDSEDNFRKGHAIAAGCLFL SLLAAFTARTRLNALNKRNKIILQEMAQSDEKRVEDESVEIWDNDPRYVFLT* |
| Coding | >AgabiH97|116720 ATGACCTTGGTGGAAAGAAGGCTGACAATCTCCGATACTATTCTCGACTCACCACCTGACCAAAATAATGTACCC ATGGCTAGAGCATTGACCGGAGCCAGCATAAAGTTCAACTCCACTAGTTCGACAGAAATTAAAGAGGTTGATGTG TCCAAAACCCCACACGATCAGCAAGCTTCCGATGGAACATTACATCAGAGTGGATTAGGGCCTCCTCAACGAAGG CATTTCTTCTCTCCTTTAGACCCGACATGGGCAGAGGCGGTACATCGTGATGCTGAGACTGTGCAATATACTCCA GAAGAGGAGAGACGCGTTCGGCGCAAGATTGACAACAGGGTTTTACCACTTGTCATCATTAGTTTCCTGTTTAAT CAATTTGATCGCACAAATGTTGGCAACGCGCACGTCATAGATGCTTTCAACGACAATTATGAAATCACCACGAAT CAGAAATGGACCCTCGCATTAAGTATTTTCTACGTGGGATACTGCACACTCGAGATGCCTGCTAATGGTATAAAT TTCTTGGTAAAGCCACGTAAACTGACCAACCCCACAGTCCTGCAGCGACATATTGGAGCAAATAGATTCTTCTTC ATTTCCTTAACGTTTTGGGGTCTCTCATCCCTTTCTTTTACATACGCCAAAGGTTATGCAGCGCTCTTGGTGTTG CGCGTACTTATGGGGATCGGAGAAGCAGGCTACTACGCTGGAGTGATCTATTACATGTCGTTCTGGTATACACGG AGCGAAATGGCCTTACGAATCACTTTGGGAATGACTGGAACCGTTCCAGGAGCTCTTGGTGGCCTACTCGCATTC GGCTTGGTGCGCGCACATACGTCAGTGCTGGCTGGATGGCAATTCCTTTTCCTTATTGAAGCGATTCCTACGCTA ATTATGGGAACTTGTGATCTCCTTTTTCTCCCTGCCTTTCCCTTCACTGCCTCTTTTTTAACCCAGCGCGAAAAG GCGATTGCCCAGGCTAGGTTGAATTGCGATCATAAACCCCAGTCGCATGGTGGGATGACGGGATGGCAAGGGTTC AAAGCTGTTATATCGGATCCAAACGCCTGGCTTTTCATGACCATCTACGCTAGCTTTAATGTTGGCGTTGCGACG ATTTCATACTTCTTGCCTACGCTAATTAGAGACCTTGGATTCTCTTCAATCAATGCACAAGGGCTTACGGTCGCA CCCTATGTGGTAGGCTGGTTTATGGTCTTTATCCAATCCTGGCATAGCGATCGTACTCGAGACCGGGGATACCAC ATCATGTTCTCAGCCGCGCTGTCTTGTATCGGTTATATCATCCTTGCAACCTCTGTACAGAAAAGTGTCGGTGCT GCTTACTTTGCATTGTTTCTTGTCGTTGGAGGAAACTTTAGTCTCTTTCCTTTGGTAATGAGTTGGGCTACAAAC ACCTTTTCTCCTACGTCTAAACGTGGTGTTGGAACGGCGTTTATCGTCTCGATATCCAATTGTATATCTATCGCC TCACCTCAAGTTTACTTTGACTCCGAGGATAATTTTCGTAAAGGTCATGCGATAGCCGCTGGTTGTCTATTTCTC TCACTCCTTGCTGCATTTACTGCTCGTACTCGGTTGAACGCGTTAAACAAGAGGAACAAAATAATACTGCAGGAG ATGGCCCAATCTGATGAAAAAAGAGTGGAAGATGAGAGCGTTGAAATTTGGGATAATGATCCCCGTTATGTATTC TTAACTTGA |
| Transcript | >AgabiH97|116720 ATGACCTTGGTGGAAAGAAGGCTGACAATCTCCGATACTATTCTCGACTCACCACCTGACCAAAATAATGTACCC ATGGCTAGAGCATTGACCGGAGCCAGCATAAAGTTCAACTCCACTAGTTCGACAGAAATTAAAGAGGTTGATGTG TCCAAAACCCCACACGATCAGCAAGCTTCCGATGGAACATTACATCAGAGTGGATTAGGGCCTCCTCAACGAAGG CATTTCTTCTCTCCTTTAGACCCGACATGGGCAGAGGCGGTACATCGTGATGCTGAGACTGTGCAATATACTCCA GAAGAGGAGAGACGCGTTCGGCGCAAGATTGACAACAGGGTTTTACCACTTGTCATCATTAGTTTCCTGTTTAAT CAATTTGATCGCACAAATGTTGGCAACGCGCACGTCATAGATGCTTTCAACGACAATTATGAAATCACCACGAAT CAGAAATGGACCCTCGCATTAAGTATTTTCTACGTGGGATACTGCACACTCGAGATGCCTGCTAATGGTATAAAT TTCTTGGTAAAGCCACGTAAACTGACCAACCCCACAGTCCTGCAGCGACATATTGGAGCAAATAGATTCTTCTTC ATTTCCTTAACGTTTTGGGGTCTCTCATCCCTTTCTTTTACATACGCCAAAGGTTATGCAGCGCTCTTGGTGTTG CGCGTACTTATGGGGATCGGAGAAGCAGGCTACTACGCTGGAGTGATCTATTACATGTCGTTCTGGTATACACGG AGCGAAATGGCCTTACGAATCACTTTGGGAATGACTGGAACCGTTCCAGGAGCTCTTGGTGGCCTACTCGCATTC GGCTTGGTGCGCGCACATACGTCAGTGCTGGCTGGATGGCAATTCCTTTTCCTTATTGAAGCGATTCCTACGCTA ATTATGGGAACTTGTGATCTCCTTTTTCTCCCTGCCTTTCCCTTCACTGCCTCTTTTTTAACCCAGCGCGAAAAG GCGATTGCCCAGGCTAGGTTGAATTGCGATCATAAACCCCAGTCGCATGGTGGGATGACGGGATGGCAAGGGTTC AAAGCTGTTATATCGGATCCAAACGCCTGGCTTTTCATGACCATCTACGCTAGCTTTAATGTTGGCGTTGCGACG ATTTCATACTTCTTGCCTACGCTAATTAGAGACCTTGGATTCTCTTCAATCAATGCACAAGGGCTTACGGTCGCA CCCTATGTGGTAGGCTGGTTTATGGTCTTTATCCAATCCTGGCATAGCGATCGTACTCGAGACCGGGGATACCAC ATCATGTTCTCAGCCGCGCTGTCTTGTATCGGTTATATCATCCTTGCAACCTCTGTACAGAAAAGTGTCGGTGCT GCTTACTTTGCATTGTTTCTTGTCGTTGGAGGAAACTTTAGTCTCTTTCCTTTGGTAATGAGTTGGGCTACAAAC ACCTTTTCTCCTACGTCTAAACGTGGTGTTGGAACGGCGTTTATCGTCTCGATATCCAATTGTATATCTATCGCC TCACCTCAAGTTTACTTTGACTCCGAGGATAATTTTCGTAAAGGTCATGCGATAGCCGCTGGTTGTCTATTTCTC TCACTCCTTGCTGCATTTACTGCTCGTACTCGGTTGAACGCGTTAAACAAGAGGAACAAAATAATACTGCAGGAG ATGGCCCAATCTGATGAAAAAAGAGTGGAAGATGAGAGCGTTGAAATTTGGGATAATGATCCCCGTTATGTATTC TTAACTTGA |
| Gene | >AgabiH97|116720 ATGACCTTGGTGGAAAGAAGGCTGACAATCTCCGATACTATTCTCGACTCACCACCTGACCAAAATAATGTACCC ATGGCTAGAGCATTGACCGGTCCCGTACACACCACTTTGATCCACTTTGATCACGAGCTTAACGCTCTTCCCACA GGAGCCAGCATAAAGTTCAACGTGGTCTTACGTTTCCCTCTTACCTTGCCGCCATAATGTCAACCAAGTCCACTA GTTCGACAGAAATTAAAGAGGTTGATGTGTCCAAAACCCCACACGATCAGCAAGCTTCCGATGGAACATTACATC AGAGTGGATTAGGGCCTCCTCAACGAAGGCATTTCTTCTCTCCTTTAGACCCGACATGGGCAGAGGCGGTACATC GTGATGCTGAGACTGTGCAATATACTCCAGAAGAGGAGGTTCGTTTCCAAACCGCTTGATCGCTTTGCTTTGGAA AATGGGAACTGAGCTCCTTCAAGAGACGCGTTCGGCGCAAGATTGACAACAGGGTTTTACCACTTGTCATCATTA GGTACGCGTTCTAAATTATTTTTGTGGTGGCAAACATTGACGGCGCAATAGTTTCCTGTGTATGTCAATACGAAG CTTCTGGCATCTCTAGGAATTTTAACTGACAAACGCAACATACATACTAGTTAATCAATTTGGTGAGATGCCGAG TCCTTGTTTCTTTCAAAGTGCTTGATCCTAATGGCATCGTAGATCGCACAAATGTGTACGTGTTTCCGAAACCCT TCACAGATAGATTCTCATGTTCCTACAGTGGCAACGCGCACGTCATAGATGCTTTCAACGACAATTATGTATGTT TCTTGACAATTATAACTTCAATCTTCGTTGATTCAGTCATCAGGAAATCACCACGAATCAGAAATGGACCCTCGC ATTAAGTATTTTCTACGTGGGATACTGTAGGTTGCAATTCAGTCACGCATACAATGATTAATGATCATTAGGCAC ACTCGAGATGCCTGCTAATGGTATAAATTTCTTGGTAAAGCCACGTAAACTGACCAACCCCACAGTCCTGCAGCG ACATATTGGAGCAAATAGATTGTGAGGTTTTTATATCTATGAATGCTCCTATATATCTAAATCACCTCCTTATCT CAGCTTCTTCATTTCCTTAACGTTTTGGGGTCTCTCATCCCTTTCTTTTACATACGCCAAAGGTTATGCAGCGCT CTTGGTGTTGCGGTGCGGAATCTCTCGGTTCTTTCAAGTATCGCATTTCTCAAAATGATAATCTATACAGCGTAC TTATGGGGATCGGAGAAGCAGGCTACTACGCTGGAGTGATCTATTACATGTCGTTCTGGTATACACGGTGCGCAA GAATTTGACATTTACTCGAATCTATCGTTCTGAGGTGTTTGTAGGAGCGAAATGGCCTTACGAATCACGTCAGTT AAGAACCCTCGTCTTCTGGTAACCAATTTTGACAAGTAATTAGTTTGGGAATGACTGGAACCGTTCCAGGAGCTC TTGGTGTGCGTCGTTTGTTCGGAATTATCACCGTTCGATCTCATTATTGGTGAACAGGGCCTACTCGCATTCGGC TTGGTGCGCGCACATACGTCAGTGCTGGCTGGGTAAGTACTAGCCTATAAACATAGTCAGACGCTCATGTAATTC TCAGATGGCAATTCCTTTTCCTTGTAGGCATTTTATATCACTAAGGGCAAGCTTTAAACTCAAAGACTGTCCCAG ATTGAAGCGATTCCTACGCTAATTATGGGAACTTGTGATCTCCTTTTTCTCCCTGCCTTTCCCTTCACTGCCTCT TTTTTAACCCAGCGCGAAAAGGCGATTGCCCAGGCTAGGTTGAATTGCGATCATAAACCCCAGTCGCATGGTGGG ATGACGGGATGGCAAGGGTTCAAAGCTGTTATATCGGATCCAAACGCCTGGCTTTTCATGACCATCTACGCTAGC TGTATGTGTTTCTCCTTTGAAATTCGTTGAAAATCTGACATTTTTCAAGTTAATGTTGGCGTTGCGACGATTTCA TACTTCTTGCCTACGGTACGCGCCTCTCCTGAACTATGGGTGCTAGGTTGTATTTCTAATGCTGTCCGTAGCTAA TTAGAGACCTTGGATTCTCTTCAATCAATGCACAAGGGCTTACGGTCGCACCCTATGTGGTAGGCTGGTTTATGG TCTTTATCCAATCCTGGCATAGCGATCGTACTCGAGACCGGGGATACCACATCATGTTCTCAGCCGCGCTGTCTT GTATCGGTTATATCATCCTTGCAACCTCTGTACAGAAAAGTGTCGGTGCTGCTTACTTTGCATTGTTTCTTGTCG TTGGAGGAAACTTTAGTCTCTTTCCTTTGGTAATGTGAGTGACACTCCGTCATAGTGTGTTTTTAGGGTCATTTT GCTTATTAATCTATGTAGGAGTTGGGCTACAAACACCTTTTCTCCTACGTCTAAACGTGGTGTTGGAACGGCGTT TATCGTCTCGATATCCAATTGTATATCTATGTAAGTCAGATGAGTATTTATAGTTTGAATGTTACTCTGACCATC TGCCTTTTGTACCAGCGCCTCACCTCAAGTTTACTTTGACTCCGAGGATAATTTTCGTAAAGGTCATGCGATAGC CGCTGGGTATGTGGCGTTACGATCGCCGTCCTTCGTCACCATAACCAACCCGTATTTTCTAGTTGTCTATTTCTC TCACTCCTTGCTGCATTTACTGCTCGTACTCGGTTGAACGCGTTAAACAAGAGGAACAAAATAATACTGCAGGAG ATGGCCCAATCTGATGAAAAAAGAGTGGAAGATGAGAGCGTTGAAATTTGGGATAATGATCCCCGTTATGTATTC TTAACTTGA |