Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|116370
Gene name
Locationscaffold_9:710653..713899
Strand+
Gene length (bp)3246
Transcript length (bp)1968
Coding sequence length (bp)1968
Protein length (aa) 656

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07944 Glyco_hydro_127 Beta-L-arabinofuranosidase, GH127 6.6E-23 265 539

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 22 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|116370
MKLLPALQLLFIPGVSFLAQAQTGLAPKKFLPLPLGQVRPRGWLSDQLVVQTNGLAGHEHEFYHYVSQTDWTGGD
SLYSNLEEAGSYWFNAMVPNSVLVNETVIHQKTLEFLDYVLDHQDSTGWIGPEVNTNKPRFLWGRYPFFFGAIQL
TEVHPELTDRVVTALHKFVPLANKMLHNNGEGVDAWAQTRWEDFVLTLQWLHDFHPNGKEDLLVDTMKQLKFTGV
PWEKVFSEELFPKTAVEHTPNPFNLPLTWHGVNIAEGLKALPTTFRFTHNQTDIDTASKGWDMLFQYHGRPSGIY
AADEYLAGLEAVRGTELCLVVETMFSGSYLYQVIGDPKFADRVERIAYNALPATITGDMWSRQYLQQQNQIASKD
MSPNPFPNDGSYSNVFGLEPNYPCCTVNFPQGWPKFISNAFLKTPDQKSLVHLYLGPFSTSSTLSSDNHVTVNVD
TLYPFSDTLHTTITATKAFTYFVRIPSWVSGGTIAINGGKANAVNPSNGLQAVSVSPGTTTFVLNLPAKITIENR
PHDSIAIHRGPFNFAFDIPRNQKVLRRDSREPRAVDLEFDASGAWQFAIDPATLHFETTSPSSLPSPIFDSGKSP
LSMTVTACPIDWDIAGNTFAAPPPSNPACTGRNTTLTLTPLGTTKLRISEFPVMS*
Coding >AgabiH97|116370
ATGAAGCTTCTACCCGCATTACAATTGCTCTTCATCCCAGGTGTATCTTTTCTCGCCCAAGCACAGACCGGACTT
GCCCCGAAGAAGTTTTTGCCCTTGCCTCTTGGACAAGTCAGACCTCGAGGATGGCTGAGTGATCAGTTGGTTGTC
CAGACAAATGGCCTTGCCGGCCACGAGCACGAGTTCTATCATTACGTCTCACAAACTGATTGGACCGGCGGTGAC
TCGCTTTACTCGAACCTAGAAGAAGCTGGAAGCTACTGGTTTAATGCAATGGTTCCGAACAGCGTCCTTGTCAAT
GAAACCGTCATTCATCAGAAGACTCTCGAGTTCCTCGATTATGTTTTAGATCACCAAGACTCGACTGGTTGGATT
GGCCCAGAGGTGAACACTAACAAGCCTCGTTTCCTTTGGGGAAGATATCCTTTCTTCTTCGGAGCTATTCAACTT
ACCGAAGTTCATCCTGAGCTTACTGATCGTGTTGTTACTGCTCTCCATAAATTCGTTCCTCTGGCTAATAAGATG
CTCCACAATAACGGTGAGGGTGTTGATGCATGGGCTCAGACACGCTGGGAAGATTTTGTCCTCACCTTGCAATGG
TTGCATGACTTTCACCCTAATGGAAAGGAGGACCTGTTGGTCGATACAATGAAGCAATTGAAATTTACTGGTGTT
CCCTGGGAGAAAGTCTTCTCTGAGGAGTTATTCCCTAAGACGGCCGTGGAACATACACCAAATCCTTTCAACCTC
CCCTTGACATGGCACGGTGTCAATATAGCAGAAGGTCTGAAAGCTCTACCAACCACATTCCGTTTCACGCACAAT
CAAACCGATATCGATACCGCAAGCAAAGGCTGGGACATGTTGTTCCAGTACCACGGAAGACCCTCCGGTATATAC
GCTGCCGACGAATACCTGGCCGGTTTGGAAGCTGTTCGAGGGACGGAACTCTGCCTCGTCGTGGAAACTATGTTC
TCGGGGTCTTATCTTTACCAAGTCATCGGAGACCCTAAATTTGCTGACAGGGTCGAGAGGATCGCATACAATGCG
CTCCCTGCGACAATTACTGGAGACATGTGGAGCAGGCAGTACTTGCAACAGCAGAATCAGATTGCTTCCAAGGAC
ATGTCTCCTAACCCTTTCCCGAATGATGGGTCTTACTCTAACGTCTTCGGATTGGAACCAAATTACCCGTGCTGC
ACGGTGAATTTCCCGCAAGGATGGCCGAAGTTCATCTCCAACGCTTTCCTCAAGACCCCTGATCAAAAATCATTG
GTGCACTTATATCTTGGACCATTCTCGACCTCGTCCACTCTCTCATCTGACAATCATGTTACGGTTAACGTTGAC
ACGCTTTACCCATTCAGTGATACCTTGCACACAACCATCACTGCGACTAAAGCTTTCACCTATTTCGTTCGTATT
CCGAGTTGGGTTTCCGGAGGCACGATCGCAATCAATGGTGGCAAAGCCAACGCAGTCAATCCATCGAACGGCTTG
CAAGCGGTTTCTGTTTCTCCCGGTACTACTACATTTGTTCTCAACTTACCGGCCAAGATAACTATTGAGAACCGT
CCTCATGATTCCATCGCCATTCATCGGGGACCATTCAATTTCGCTTTTGATATCCCCAGAAACCAGAAAGTTCTT
AGGAGAGACTCACGAGAACCTCGCGCAGTTGACCTCGAGTTCGATGCTTCAGGAGCATGGCAGTTCGCAATCGAC
CCTGCTACACTTCACTTCGAGACGACTTCACCGAGTTCCCTTCCCAGCCCGATCTTCGACTCTGGGAAATCACCT
TTGAGCATGACGGTCACGGCTTGCCCGATCGATTGGGACATCGCCGGTAATACATTCGCAGCTCCGCCGCCTTCG
AACCCTGCGTGTACAGGAAGGAATACCACGTTGACGTTGACTCCACTCGGGACCACTAAGTTGAGAATCAGCGAG
TTCCCTGTCATGTCTTGA
Transcript >AgabiH97|116370
ATGAAGCTTCTACCCGCATTACAATTGCTCTTCATCCCAGGTGTATCTTTTCTCGCCCAAGCACAGACCGGACTT
GCCCCGAAGAAGTTTTTGCCCTTGCCTCTTGGACAAGTCAGACCTCGAGGATGGCTGAGTGATCAGTTGGTTGTC
CAGACAAATGGCCTTGCCGGCCACGAGCACGAGTTCTATCATTACGTCTCACAAACTGATTGGACCGGCGGTGAC
TCGCTTTACTCGAACCTAGAAGAAGCTGGAAGCTACTGGTTTAATGCAATGGTTCCGAACAGCGTCCTTGTCAAT
GAAACCGTCATTCATCAGAAGACTCTCGAGTTCCTCGATTATGTTTTAGATCACCAAGACTCGACTGGTTGGATT
GGCCCAGAGGTGAACACTAACAAGCCTCGTTTCCTTTGGGGAAGATATCCTTTCTTCTTCGGAGCTATTCAACTT
ACCGAAGTTCATCCTGAGCTTACTGATCGTGTTGTTACTGCTCTCCATAAATTCGTTCCTCTGGCTAATAAGATG
CTCCACAATAACGGTGAGGGTGTTGATGCATGGGCTCAGACACGCTGGGAAGATTTTGTCCTCACCTTGCAATGG
TTGCATGACTTTCACCCTAATGGAAAGGAGGACCTGTTGGTCGATACAATGAAGCAATTGAAATTTACTGGTGTT
CCCTGGGAGAAAGTCTTCTCTGAGGAGTTATTCCCTAAGACGGCCGTGGAACATACACCAAATCCTTTCAACCTC
CCCTTGACATGGCACGGTGTCAATATAGCAGAAGGTCTGAAAGCTCTACCAACCACATTCCGTTTCACGCACAAT
CAAACCGATATCGATACCGCAAGCAAAGGCTGGGACATGTTGTTCCAGTACCACGGAAGACCCTCCGGTATATAC
GCTGCCGACGAATACCTGGCCGGTTTGGAAGCTGTTCGAGGGACGGAACTCTGCCTCGTCGTGGAAACTATGTTC
TCGGGGTCTTATCTTTACCAAGTCATCGGAGACCCTAAATTTGCTGACAGGGTCGAGAGGATCGCATACAATGCG
CTCCCTGCGACAATTACTGGAGACATGTGGAGCAGGCAGTACTTGCAACAGCAGAATCAGATTGCTTCCAAGGAC
ATGTCTCCTAACCCTTTCCCGAATGATGGGTCTTACTCTAACGTCTTCGGATTGGAACCAAATTACCCGTGCTGC
ACGGTGAATTTCCCGCAAGGATGGCCGAAGTTCATCTCCAACGCTTTCCTCAAGACCCCTGATCAAAAATCATTG
GTGCACTTATATCTTGGACCATTCTCGACCTCGTCCACTCTCTCATCTGACAATCATGTTACGGTTAACGTTGAC
ACGCTTTACCCATTCAGTGATACCTTGCACACAACCATCACTGCGACTAAAGCTTTCACCTATTTCGTTCGTATT
CCGAGTTGGGTTTCCGGAGGCACGATCGCAATCAATGGTGGCAAAGCCAACGCAGTCAATCCATCGAACGGCTTG
CAAGCGGTTTCTGTTTCTCCCGGTACTACTACATTTGTTCTCAACTTACCGGCCAAGATAACTATTGAGAACCGT
CCTCATGATTCCATCGCCATTCATCGGGGACCATTCAATTTCGCTTTTGATATCCCCAGAAACCAGAAAGTTCTT
AGGAGAGACTCACGAGAACCTCGCGCAGTTGACCTCGAGTTCGATGCTTCAGGAGCATGGCAGTTCGCAATCGAC
CCTGCTACACTTCACTTCGAGACGACTTCACCGAGTTCCCTTCCCAGCCCGATCTTCGACTCTGGGAAATCACCT
TTGAGCATGACGGTCACGGCTTGCCCGATCGATTGGGACATCGCCGGTAATACATTCGCAGCTCCGCCGCCTTCG
AACCCTGCGTGTACAGGAAGGAATACCACGTTGACGTTGACTCCACTCGGGACCACTAAGTTGAGAATCAGCGAG
TTCCCTGTCATGTCTTGA
Gene >AgabiH97|116370
ATGAAGCTTCTACCCGCATTACAATTGCTCTTCATCCCAGGTGTATCTTTTCTCGCCCAAGCACAGACCGGACGT
TAGTGCTTATCCACGCACTGTATTTGAGGCGAGGTATTGACGATTTTCTGTCTCCAATAGTTGCCCCGAAGAAGT
TTTTGCCCTTGCCTCTTGGACAAGTCAGACCTCGAGGATGGCTGAGTGATCAGGTAGAGCATCTTCGGCTGTCCT
TATCTCTGGTCCCCGACTCATGTCATCCAGTTGGTTGTCCAGACAAATGGCCTTGCCGGCCACGAGCACGAGTTC
TATCATTAGTGAGAAAACACAAGTTTTGATTTTGAGTTTCACTCATCGAATCATAGCGTCTCACAAACTGATTGG
ACCGGCGGTGACTCGCTTTACTCGAACCTAGAAGAAGGTATGACGATGTATCAGCCTGCGTGAATTATGATTGAC
GCGTCGACTCTGGAAACCCAGCTGGAAGCTACTGGTTTGTAAGTCCATGGATTGCGCGTTTCTCATCATAGATGA
CGAAGTCCAAAAACGCTTAGAATGCAATGGTTCCGAACAGCGTCCTTGTCAATGAAACCGTCATTCATCAGAAGA
CTCTCGAGTTCCTCGATTATGTTTTAGATCACCAAGACTCGACTGGTTGGATTGGCCCAGAGGTGAACACTAACA
AGCCTCGTTTCCTTTGGGGAAGGTCAGTCAGTAAAAAGGAAAACATCTTCTTTTCTCAACTTTTCTAGATATCCT
TTCTTCTTCGGAGCTATTCAACTTACCGAAGTTCATCCTGAGCTTACTGATCGTGTTGTTACTGCTCTCCATAAA
TTCGTTCCTCTGGCTAATAAGATGCTCCACAATAACGGTGAGGGTGTTGATGCATGGGCTCAGACACGCTGGGAA
GATTTTGTCCTCACCTTGCAATGGTAAACTTCGCGGCTGTGGATGAGTTTTCTATCTTGCTGACGGGTCTTAAGG
TTGCATGACTTTCACCCTAATGGAAAGGAGGACCTGTTGGTCGATACAATGAAGCAATTGAAATTTACTGGTGTT
CCCTGGGAGAAAGTCTTCTCTGAGGAGGTCAGAAGAACTTAATTCAAACCGTGTTTACATTATTGACCTTAACTT
CCTATAGTTATTCCCTAAGACGGCCGGTGAGTTACTTCACTGATTTTATCAGCCAAAACGCTCAAGAATCGCAAT
ACAGTGGAACATACACCAGTACGTTCTGAACATTTCGTATTGAATATCCAGCTGAACAAGTACTAGAATCCTTTC
AACCTCCCCTTGACAGTAAGTATCGATATCCTGATATCTCTCTGCGGGACATGAATCCAAACTCTATTATAGTGG
CACGGTGTCAATATAGCAGAAGGTCTGAAAGCTCTACCAACCACATTCCGTTTCACGCACAATCAAACCGGTGGG
TTTTAAGCGCGACTGCTCGCTACGTTATTTTAATCGTGTCCTCGTAGATATCGATACCGCAAGCAAAGGCTGGGA
CATGTTGTTCCAGTACCACGGAAGACCCTCCGGTATATACGCTGCCGACGAATACCTGGCCGGTTTGGAAGCTGT
TCGAGGGTAAGTCGATTTGTGATCCTTGCCTGAGCGTGTTACTCACGTTTAACGGGGTATAGGACGGAACTCTGC
CTCGTCGTGGTACGATTCATGTCTGTTTTTAATCAAATCCCAGTTCTGAATATGATTCTTTATTAACGACGACAG
GAAACTATGTTCTCGTAAGTTGTTGTCAAGTCATAGTGACCATATATAATGTTCATCTTCTCTCAGGGGGTCTTA
TCTTTACCAAGTCATCGGAGACCCTAAATTTGCTGACAGGGTAAGCTTGATTTTGTTTCGAAGACTGACATTTTC
TCATCGAATTTTAAGGTCGAGAGGATCGCATACAATGCGCTCCCTGCGACAATTACTGGAGGTTAGCGCATACTT
TATTCATTCCTATGGACTATCTCCTCAGCCCAAGCGTAGACATGTGGAGCAGGCAGTACTTGCAACAGCAGAATC
AGATTGCTTCCAAGGACATGTCTCCGTGAGTGGTCAATTCAAGTTACGTGCTATTAATACCTATTTATATTCCCC
AGTAACCCTTTCCCGAATGATGGGTAAGAACTCGCGATGAGGGTCAACATATTTGCTTATATACAATAGGTCTTA
CTCTAACGTCTTCGGATTGGAACCAAATTACCCGTTAGTCATTTCCGTCAACTGAATCCCTTTTTCCCTCTGTTG
AATTTCGACTAAAGGTGCTGCACGGTGAATTTCCCGCAAGGATGGCCGAAGTTCATCTCCAACGCTTTCCTCAAG
ACCCCTGATCAAAAATCATTGGTGCACTTATATCTTGGACCATTCTCGACCTCGTCCACTCTCTCATCTGGTCAG
CCTTGTCACCTCCGGATATACGCCTTCTGATTTATTGCCTGCAGACAATCATGTTACGGTTAACGTTGACACGCT
TTACCCATTCAGTGATACCTTGCACACAACCATCACTGCGACTAAAGCTTTCACCTATTTCGTTCGTATTCCGAG
TTGGGTTTCCGGAGGCACGATCGCAATCAATGGTGGCAAAGCCAACGCAGTCAATCCATCGAACGGCTTGCAAGC
GGTTTCTGTTTCTCCCGGTACTACTACATTTGTTCTCAACTTACCGGCCAAGATAACTATTGGTACGCTAAGTAG
CTTTTTTGTCTCAACGTCTCTTCTAATGATTTATGTAGAGAACCGTCCTCATGATTCCATCGCCATTCATCGGGG
ACCATTCAATTTCGCTTTTGATAGTGAGTGTATAGTTTTGGATTACCACGGACTCTTCTCATATCTTTAAAGTCC
CCAGAAACCAGAAAGTTCTTAGGAGAGACTCACGAGAACCTCGCGCAGTTGACCTCGAGTTCGATGCTTCAGGAG
CATGGCAGTTCGCAATCGACCCTGCTACACTTCACTTCGAGACGACTTCACCGAGTTCCCTTCCCAGCCCGATCT
TCGACTCTGGGAAATCACCTTTGAGCATGACGGTCACGGCTTGCCCGATCGATTGGGACATCGCCGGTAATACAT
TCGCAGCTCCGCCGCCTTCGAACCCTGCGTGTACAGGAAGGAATACCACGTTGACGTTGACTCCACTCGGGGTAA
GTAATTCATGTGTTCTGGTTCAGTGGCATATGTAGCTGAGTTTGATGATCATAGACCACTAAGTTGAGAATCAGC
GAGTTCCCTGTCATGTCTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail