Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|116240
Gene name
Locationscaffold_9:674656..675025
Strand+
Gene length (bp)369
Transcript length (bp)201
Coding sequence length (bp)201
Protein length (aa) 67

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 21 0.45

Transmembrane Domains

Domain # Start End Length
1 7 29 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|116240
MQPTQLFFALVALCATAVMAGPAPAGAVEARGFICDFLPQPAADDACSTVCKQEGNGMGGHCVDAL*
Coding >AgabiH97|116240
ATGCAACCTACCCAACTCTTCTTCGCTCTCGTCGCTCTCTGCGCCACAGCCGTCATGGCTGGACCTGCCCCCGCT
GGTGCAGTTGAAGCTCGTGGCTTCATCTGTGACTTCCTTCCTCAACCTGCTGCCGATGACGCGTGCAGCACCGTC
TGCAAGCAGGAAGGCAATGGCATGGGTGGCCACTGTGTCGACGCATTGTAA
Transcript >AgabiH97|116240
ATGCAACCTACCCAACTCTTCTTCGCTCTCGTCGCTCTCTGCGCCACAGCCGTCATGGCTGGACCTGCCCCCGCT
GGTGCAGTTGAAGCTCGTGGCTTCATCTGTGACTTCCTTCCTCAACCTGCTGCCGATGACGCGTGCAGCACCGTC
TGCAAGCAGGAAGGCAATGGCATGGGTGGCCACTGTGTCGACGCATTGTAA
Gene >AgabiH97|116240
ATGCAACCTACCCAACTCTTCTTCGCTCTCGTCGCTCTCTGCGCCACAGCCGTCATGGCTGGACCTGCCCCCGCT
GGTGCAGTTGAAGCTCGTGGCTTCATCTGTGACTTCCTTCCTCAACCTGCTGCCGATGACGCGTGCAGCACCGTC
TGCAAGCAGGAAGGCAATGGCATGGGTGGCCACTGTGTCGGTGAGTACATAAACATGTAGCGTAGACGATTGATA
TTTACCGAGAGGTTGACAGACGGTACCTGCACCTGCTTGCACTAATTGTGAGATCAAATCGATCTCCATACGTTG
AGCATGTAAGTTTTCATTTTCATGATGAAAAGACTACGACTTATTGTATACGTGATGATTACAGTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail