© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | AgabiH97|115830 |
| Gene name | |
| Location | scaffold_9:573380..573880 |
| Strand | - |
| Gene length (bp) | 500 |
| Transcript length (bp) | 276 |
| Coding sequence length (bp) | 276 |
| Protein length (aa) | 92 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02939 | UcrQ | UcrQ family | 1.8E-28 | 10 | 85 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P50523|QCR8_SCHPO | Cytochrome b-c1 complex subunit 8 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=qcr8 PE=3 SV=1 | 3 | 89 | 1.0E-15 |
| sp|P08525|QCR8_YEAST | Cytochrome b-c1 complex subunit 8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=QCR8 PE=1 SV=2 | 2 | 64 | 4.0E-10 |
| sp|P49346|QCR8_KLULA | Cytochrome b-c1 complex subunit 8 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=QCR8 PE=3 SV=1 | 2 | 64 | 3.0E-09 |
| sp|P48503|QCR8_NEUCR | Cytochrome b-c1 complex subunit 8 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=qcr-8 PE=1 SV=1 | 7 | 84 | 6.0E-09 |
| sp|O14949|QCR8_HUMAN | Cytochrome b-c1 complex subunit 8 OS=Homo sapiens GN=UQCRQ PE=1 SV=4 | 19 | 82 | 8.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005750 | mitochondrial respiratory chain complex III | Yes |
| GO:0006122 | mitochondrial electron transport, ubiquinol to cytochrome c | Yes |
| GO:0008152 | metabolic process | No |
| GO:0098800 | inner mitochondrial membrane protein complex | No |
| GO:0019646 | aerobic electron transport chain | No |
| GO:0005575 | cellular_component | No |
| GO:0098798 | mitochondrial protein-containing complex | No |
| GO:0006091 | generation of precursor metabolites and energy | No |
| GO:0098803 | respiratory chain complex | No |
| GO:0009060 | aerobic respiration | No |
| GO:0045275 | respiratory chain complex III | No |
| GO:0008150 | biological_process | No |
| GO:0098796 | membrane protein complex | No |
| GO:0022900 | electron transport chain | No |
| GO:1902495 | transmembrane transporter complex | No |
| GO:1902494 | catalytic complex | No |
| GO:0022904 | respiratory electron transport chain | No |
| GO:1990351 | transporter complex | No |
| GO:0045333 | cellular respiration | No |
| GO:0032991 | protein-containing complex | No |
| GO:0070069 | cytochrome complex | No |
| GO:0009987 | cellular process | No |
| GO:0015980 | energy derivation by oxidation of organic compounds | No |
| GO:1990204 | oxidoreductase complex | No |
| GO:0044237 | cellular metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 36 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 55 | 72 | 17 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|115830 MPGPRVYTHWWGDKHGAVKQKGITQYAISPWQTKAAPHMFRNYLFNGYRRISSELIFWVLPFGIGYGIYTWGKSR YDWQNTKAGHLAESAE* |
| Coding | >AgabiH97|115830 ATGCCCGGTCCTAGGGTCTATACCCATTGGTGGGGCGACAAGCATGGCGCTGTAAAGCAAAAGGGTATTACCCAA TACGCCATCTCTCCCTGGCAGACGAAGGCCGCTCCTCACATGTTCCGTAATTACCTTTTCAACGGCTATCGTCGC ATTTCTAGCGAACTCATCTTCTGGGTCCTTCCTTTCGGTATTGGATATGGGATCTATACTTGGGGCAAGAGTCGT TACGACTGGCAAAATACCAAGGCTGGACACTTGGCTGAAAGTGCAGAATAA |
| Transcript | >AgabiH97|115830 ATGCCCGGTCCTAGGGTCTATACCCATTGGTGGGGCGACAAGCATGGCGCTGTAAAGCAAAAGGGTATTACCCAA TACGCCATCTCTCCCTGGCAGACGAAGGCCGCTCCTCACATGTTCCGTAATTACCTTTTCAACGGCTATCGTCGC ATTTCTAGCGAACTCATCTTCTGGGTCCTTCCTTTCGGTATTGGATATGGGATCTATACTTGGGGCAAGAGTCGT TACGACTGGCAAAATACCAAGGCTGGACACTTGGCTGAAAGTGCAGAATAA |
| Gene | >AgabiH97|115830 ATGCCCGGTCGTGAGTGTCTCTATGTTCGTTGGAAAAATAACTTGGAATAATTTTACTTCAACAGCTAGGGTCTA TGTAAGGCCGCAGAATACATCAGAACGCAAGCTACTCACTTCACCTTATTCATAGACCCATTGGTGGGGCGACAA GCATGGCGCTGTAAAGCAAAAGGGTATTACCCAATACGGCACGTTCTCATGTCTCTTCATACGTTTCCATACTGA CGATTCTAATTAGCCATCTCTCCCTGGCAGACGAAGGCCGCTCCTCACATGTTCCGTAATTACCTTTTCAACGGC TATCGTCGCATTTCTAGCGAACTCATCTTCTGGGTCCTTCCTTTCGGTATTGGTGCGTTACTGTCAATTCCCTGT CCCACCGCCATGATTCGGTTAATGACCAAACTCTGGCGATAGGATATGGGATCTATACTTGGGGCAAGAGTCGTT ACGACTGGCAAAATACCAAGGCTGGACACTTGGCTGAAAGTGCAGAATAA |