Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|115640
Gene name
Locationscaffold_9:521089..521952
Strand+
Gene length (bp)863
Transcript length (bp)558
Coding sequence length (bp)558
Protein length (aa) 186

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF17733 DUF5572 Family of unknown function (DUF5572) 1.3E-12 119 160

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 49 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|115640
MSSSSESRPATINPLEQFTSYPFDTDQTYQQGLASILAGNALSDNSSSDERDELLRRIRVFYFNKTTGNSITIDE
VKAYEQSLNQQDLELESLSPPSTGPVAATTTVPTPSQTTEDTKILSFAEIKELIEAGRLDEIPNNKIIPDSLNDE
TPSASIKFKRLSKQGHDISSNRQGENNTNEQTSFR*
Coding >AgabiH97|115640
ATGTCGTCAAGTAGTGAATCCCGTCCAGCAACAATCAACCCCCTAGAACAATTTACATCTTATCCATTTGACACA
GACCAGACTTACCAGCAAGGTCTCGCAAGCATTCTAGCTGGCAATGCCCTATCCGACAATTCATCTTCGGACGAA
CGTGATGAATTACTGCGACGTATAAGAGTATTTTACTTTAACAAGACAACAGGAAACTCGATAACCATTGACGAG
GTCAAGGCATACGAACAATCCCTCAATCAGCAAGATCTCGAACTAGAGTCACTATCACCGCCCTCTACCGGTCCC
GTGGCCGCAACTACCACTGTACCAACACCCTCTCAAACCACCGAAGACACCAAAATTCTATCATTCGCTGAAATC
AAAGAACTCATCGAGGCCGGCCGTTTGGATGAAATTCCCAACAACAAAATCATCCCAGATTCTCTAAATGACGAA
ACACCAAGCGCGTCAATTAAGTTTAAGCGTCTGAGTAAACAGGGTCATGATATCTCTTCTAATAGACAAGGCGAG
AATAATACAAATGAACAAACTTCTTTTCGCTAG
Transcript >AgabiH97|115640
ATGTCGTCAAGTAGTGAATCCCGTCCAGCAACAATCAACCCCCTAGAACAATTTACATCTTATCCATTTGACACA
GACCAGACTTACCAGCAAGGTCTCGCAAGCATTCTAGCTGGCAATGCCCTATCCGACAATTCATCTTCGGACGAA
CGTGATGAATTACTGCGACGTATAAGAGTATTTTACTTTAACAAGACAACAGGAAACTCGATAACCATTGACGAG
GTCAAGGCATACGAACAATCCCTCAATCAGCAAGATCTCGAACTAGAGTCACTATCACCGCCCTCTACCGGTCCC
GTGGCCGCAACTACCACTGTACCAACACCCTCTCAAACCACCGAAGACACCAAAATTCTATCATTCGCTGAAATC
AAAGAACTCATCGAGGCCGGCCGTTTGGATGAAATTCCCAACAACAAAATCATCCCAGATTCTCTAAATGACGAA
ACACCAAGCGCGTCAATTAAGTTTAAGCGTCTGAGTAAACAGGGTCATGATATCTCTTCTAATAGACAAGGCGAG
AATAATACAAATGAACAAACTTCTTTTCGCTAG
Gene >AgabiH97|115640
ATGTCGTCAAGTAGTGAATCCCGTCCAGCAACAATCAACCCCCTAGAACAATTTACATCTTATCCATTTGACACA
GACCAGACTTACCAGGTGGGTTATCCTTCTCACCAAACCAACAAATGAGAAAGAGGTATATTTTCTGCAAAGCAA
GGTCTCGCAAGCATTCTAGCTGGCAATGCCCTATCCGACAATTCATCTTCGGACGAACGTGATGAATTACTGCGA
CGTATAAGAGTATTTTACTTTAACAAGTTCGTGTTTACATATTCGTGTATATAGAAGAAGACGCTGACCGATTTA
TGCTGTTCTTATAGGACAACAGGAAACTCGATAACCATTGACGAGGTCAAGGCATACGAACAATCCCTCAATCAG
CAAGATCTCGAACTAGAGTCACTATCACCGCCCTCTACCGGTCCCGTGGCCGCAACTACCACTGTACCAACACCC
TCTCAAACCACCGAAGACACCAAAATTCTATCATTCGCTGAAATCAAAGAACTCATCGAGGCCGGCCGTTTGGAT
GAAATTCCCAACAACAAAATCATCCCAGATTCTCTAAATGTCCGTCCTTCTCTTTTTCCCATTCCTTTCGTTTTT
TCAGATAAGTTAATTGAATGATAACATGAACAGGACGAAACACCAAGCGCGTCAATTGTGCCGGCACGCAAGAAA
CCCTGGGAAATCGCTTCCGAAAATCAGGGTACCACTCCCCAAGATGTAGAAGTTTAAGCGTCTGAGGTAGGTAAG
AGTGTAAAAGCTTCAAAAACGATTCTTATGCTGCTTTCAGTAAACAGGGTCATGATATCTCTTCTAATAGACAAG
GCGAGAATAATACAAATGAACAAACTTCTTTTCGCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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