© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | AgabiH97|115560 |
| Gene name | |
| Location | scaffold_9:505556..507855 |
| Strand | + |
| Gene length (bp) | 2299 |
| Transcript length (bp) | 1449 |
| Coding sequence length (bp) | 1449 |
| Protein length (aa) | 483 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07992 | Pyr_redox_2 | Pyridine nucleotide-disulphide oxidoreductase | 4.1E-46 | 37 | 383 |
| PF00070 | Pyr_redox | Pyridine nucleotide-disulphide oxidoreductase | 1.0E-09 | 216 | 295 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q55CD9|NDH_DICDI | Probable NADH dehydrogenase OS=Dictyostelium discoideum GN=DDB_G0270104 PE=3 SV=2 | 8 | 482 | 1.0E-89 |
| sp|M0ZYF3|INDA1_SOLTU | Internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochondrial OS=Solanum tuberosum GN=NDA1 PE=3 SV=1 | 27 | 482 | 5.0E-87 |
| sp|O80874|NDA2_ARATH | Internal alternative NAD(P)H-ubiquinone oxidoreductase A2, mitochondrial OS=Arabidopsis thaliana GN=NDA2 PE=2 SV=1 | 7 | 482 | 2.0E-86 |
| sp|Q9ST63|NDA1_SOLTU | Internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochondrial OS=Solanum tuberosum GN=NDA1 PE=1 SV=1 | 27 | 482 | 2.0E-84 |
| sp|Q8GWA1|NDA1_ARATH | Internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochondrial OS=Arabidopsis thaliana GN=NDA1 PE=2 SV=1 | 27 | 482 | 9.0E-80 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q55CD9|NDH_DICDI | Probable NADH dehydrogenase OS=Dictyostelium discoideum GN=DDB_G0270104 PE=3 SV=2 | 8 | 482 | 1.0E-89 |
| sp|M0ZYF3|INDA1_SOLTU | Internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochondrial OS=Solanum tuberosum GN=NDA1 PE=3 SV=1 | 27 | 482 | 5.0E-87 |
| sp|O80874|NDA2_ARATH | Internal alternative NAD(P)H-ubiquinone oxidoreductase A2, mitochondrial OS=Arabidopsis thaliana GN=NDA2 PE=2 SV=1 | 7 | 482 | 2.0E-86 |
| sp|Q9ST63|NDA1_SOLTU | Internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochondrial OS=Solanum tuberosum GN=NDA1 PE=1 SV=1 | 27 | 482 | 2.0E-84 |
| sp|Q8GWA1|NDA1_ARATH | Internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochondrial OS=Arabidopsis thaliana GN=NDA1 PE=2 SV=1 | 27 | 482 | 9.0E-80 |
| sp|O43090|NDH2_SCHPO | Probable NADH-ubiquinone oxidoreductase C947.15c, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC947.15c PE=3 SV=1 | 35 | 477 | 2.0E-75 |
| sp|Q07500|NDH2_YEAST | External NADH-ubiquinone oxidoreductase 2, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NDE2 PE=1 SV=1 | 34 | 478 | 8.0E-74 |
| sp|O14121|NDH1_SCHPO | Probable NADH-ubiquinone oxidoreductase C3A11.07, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC3A11.07 PE=3 SV=1 | 35 | 480 | 6.0E-73 |
| sp|M1BYJ7|ENDB1_SOLTU | External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial OS=Solanum tuberosum GN=NDB1 PE=3 SV=1 | 34 | 369 | 1.0E-72 |
| sp|Q9ST62|NDB1_SOLTU | External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial OS=Solanum tuberosum GN=NDB1 PE=1 SV=1 | 34 | 369 | 2.0E-72 |
| sp|F2Z699|NDH2_YARLI | External alternative NADH-ubiquinone oxidoreductase, mitochondrial OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=NDH2 PE=1 SV=1 | 5 | 481 | 3.0E-72 |
| sp|P40215|NDH1_YEAST | External NADH-ubiquinone oxidoreductase 1, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NDE1 PE=1 SV=1 | 34 | 478 | 1.0E-70 |
| sp|Q1JPL4|NDB1_ARATH | External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial OS=Arabidopsis thaliana GN=NDB1 PE=1 SV=1 | 38 | 369 | 6.0E-68 |
| sp|Q94BV7|NDB2_ARATH | External alternative NAD(P)H-ubiquinone oxidoreductase B2, mitochondrial OS=Arabidopsis thaliana GN=NDB2 PE=1 SV=1 | 34 | 369 | 8.0E-64 |
| sp|Q9SKT7|NDB4_ARATH | External alternative NAD(P)H-ubiquinone oxidoreductase B4, mitochondrial OS=Arabidopsis thaliana GN=NDB4 PE=1 SV=1 | 35 | 369 | 1.0E-63 |
| sp|P32340|NDI1_YEAST | Rotenone-insensitive NADH-ubiquinone oxidoreductase, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NDI1 PE=1 SV=1 | 34 | 479 | 3.0E-61 |
| sp|F4JJJ3|NDB3_ARATH | External alternative NAD(P)H-ubiquinone oxidoreductase B3, mitochondrial OS=Arabidopsis thaliana GN=NDB3 PE=2 SV=1 | 35 | 369 | 1.0E-59 |
| sp|P00393|DHNA_ECOLI | NADH dehydrogenase OS=Escherichia coli (strain K12) GN=ndh PE=1 SV=2 | 56 | 452 | 4.0E-28 |
| sp|Q5HQM1|Y527_STAEQ | NADH dehydrogenase-like protein SERP0527 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=SERP0527 PE=3 SV=1 | 32 | 438 | 3.0E-25 |
| sp|Q8CPV5|Y635_STAES | NADH dehydrogenase-like protein SE_0635 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=SE_0635 PE=3 SV=1 | 32 | 438 | 2.0E-24 |
| sp|Q5HHE4|Y944_STAAC | NADH dehydrogenase-like protein SACOL0944 OS=Staphylococcus aureus (strain COL) GN=SACOL0944 PE=3 SV=1 | 32 | 438 | 5.0E-24 |
| sp|Q99VE0|Y941_STAAM | NADH dehydrogenase-like protein SAV0941 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV0941 PE=3 SV=1 | 32 | 438 | 5.0E-24 |
| sp|Q6GIE7|Y903_STAAR | NADH dehydrogenase-like protein SAR0903 OS=Staphylococcus aureus (strain MRSA252) GN=SAR0903 PE=3 SV=1 | 32 | 438 | 5.0E-24 |
| sp|Q2FZV7|Y878_STAA8 | NADH dehydrogenase-like protein SAOUHSC_00878 OS=Staphylococcus aureus (strain NCTC 8325) GN=SAOUHSC_00878 PE=1 SV=1 | 32 | 438 | 5.0E-24 |
| sp|Q2FID4|Y844_STAA3 | NADH dehydrogenase-like protein SAUSA300_0844 OS=Staphylococcus aureus (strain USA300) GN=SAUSA300_0844 PE=3 SV=1 | 32 | 438 | 5.0E-24 |
| sp|Q7A6J4|Y802_STAAN | NADH dehydrogenase-like protein SA0802 OS=Staphylococcus aureus (strain N315) GN=SA0802 PE=1 SV=1 | 32 | 438 | 5.0E-24 |
| sp|Q6GAY5|Y811_STAAS | NADH dehydrogenase-like protein SAS0811 OS=Staphylococcus aureus (strain MSSA476) GN=SAS0811 PE=3 SV=1 | 32 | 438 | 7.0E-24 |
| sp|Q8NXG0|Y823_STAAW | NADH dehydrogenase-like protein MW0823 OS=Staphylococcus aureus (strain MW2) GN=MW0823 PE=3 SV=1 | 32 | 438 | 7.0E-24 |
| sp|Q4L4V6|Y2010_STAHJ | NADH dehydrogenase-like protein SH2010 OS=Staphylococcus haemolyticus (strain JCSC1435) GN=SH2010 PE=3 SV=1 | 32 | 438 | 9.0E-24 |
| sp|Q2YWP9|Y807_STAAB | NADH dehydrogenase-like protein SAB0807 OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=SAB0807 PE=3 SV=1 | 32 | 438 | 9.0E-24 |
| sp|Q49W80|Y1834_STAS1 | NADH dehydrogenase-like protein SSP1834 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP1834 PE=3 SV=1 | 32 | 438 | 3.0E-22 |
| sp|P44856|DHNA_HAEIN | NADH dehydrogenase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=ndh PE=3 SV=1 | 139 | 420 | 4.0E-21 |
| sp|O05267|YUMB_BACSU | NADH dehydrogenase-like protein YumB OS=Bacillus subtilis (strain 168) GN=yumB PE=3 SV=1 | 32 | 438 | 1.0E-20 |
| sp|O32117|YUTJ_BACSU | NADH dehydrogenase-like protein YutJ OS=Bacillus subtilis (strain 168) GN=yutJ PE=3 SV=2 | 153 | 391 | 5.0E-17 |
| sp|P80861|YJLD_BACSU | NADH dehydrogenase-like protein YjlD OS=Bacillus subtilis (strain 168) GN=yjlD PE=1 SV=3 | 150 | 455 | 5.0E-15 |
| sp|Q8GXR9|DHNA_ARATH | Alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=NDC1 PE=1 SV=2 | 34 | 419 | 2.0E-13 |
| sp|Q1JPL4|NDB1_ARATH | External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial OS=Arabidopsis thaliana GN=NDB1 PE=1 SV=1 | 372 | 482 | 3.0E-07 |
| sp|P42433|NASB_BACSU | Assimilatory nitrate reductase electron transfer subunit OS=Bacillus subtilis (strain 168) GN=nasB PE=2 SV=2 | 34 | 365 | 7.0E-07 |
| sp|Q9ST62|NDB1_SOLTU | External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial OS=Solanum tuberosum GN=NDB1 PE=1 SV=1 | 372 | 482 | 1.0E-06 |
| sp|M1BYJ7|ENDB1_SOLTU | External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial OS=Solanum tuberosum GN=NDB1 PE=3 SV=1 | 372 | 482 | 2.0E-06 |
| sp|Q9SKT7|NDB4_ARATH | External alternative NAD(P)H-ubiquinone oxidoreductase B4, mitochondrial OS=Arabidopsis thaliana GN=NDB4 PE=1 SV=1 | 372 | 478 | 4.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016491 | oxidoreductase activity | Yes |
| GO:0003824 | catalytic activity | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 33 | 0.45 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| Casing | Casing mycelium | 39.04 | 22.88 | 55.20 |
| Initials | Initials knots | 35.05 | 20.19 | 49.90 |
| Pileal_Stipeal_center | Stage I stipe center | 20.52 | 11.29 | 29.75 |
| Pileal_Stipeal_shell | Stage I stipe shell | 21.89 | 12.13 | 31.65 |
| DIF_stipe_center | Stage II stipe center | 19.06 | 10.29 | 27.82 |
| DIF_stipe_shell | Stage II stipe shell | 18.92 | 10.28 | 27.57 |
| DIF_stipe_skin | Stage II stipe skin | 18.93 | 10.27 | 27.59 |
| DIF_cap_skin | Stage II cap skin | 21.16 | 11.68 | 30.65 |
| DIF_cap_tissue | Stage II cap tissue | 21.84 | 12.06 | 31.62 |
| DIF_gill_tissue | Stage II gill tissue | 24.07 | 13.48 | 34.66 |
| YFB_stipe_center | Young fruiting body stipe center | 26.81 | 15.18 | 38.45 |
| YFB_stipe_shell | Young fruiting body stipe shell | 22.39 | 12.43 | 32.35 |
| YFB_stipe_skin | Young fruiting body stipe skin | 21.02 | 11.59 | 30.45 |
| YFB_cap_skin | Young fruiting body cap skin | 22.56 | 12.51 | 32.61 |
| YFB_cap_tissue | Young fruiting body cap tissue | 18.47 | 10.01 | 26.93 |
| YFB_gill_tissue | Young fruiting body gill tissue | 19.00 | 10.32 | 27.69 |
| YFB_veil | Young fruiting body veil | 22.66 | 12.42 | 32.91 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| Casing | DIF_gill_tissue | 0.095478 | no |
| Casing | YFB_stipe_center | 0.241032 | no |
| Casing | YFB_stipe_shell | 0.055979 | no |
| Casing | YFB_stipe_skin | 0.025711 | yes |
| Casing | YFB_cap_skin | 0.062038 | no |
| Casing | YFB_cap_tissue | 0.007439 | yes |
| Casing | YFB_gill_tissue | 0.007092 | yes |
| Casing | YFB_veil | 0.060497 | no |
| Casing | Initials | 0.819762 | no |
| Casing | Pileal_Stipeal_center | 0.020790 | yes |
| Casing | Pileal_Stipeal_shell | 0.045911 | yes |
| Casing | DIF_stipe_center | 0.008791 | yes |
| Casing | DIF_stipe_shell | 0.009123 | yes |
| Casing | DIF_stipe_skin | 0.010093 | yes |
| Casing | DIF_cap_skin | 0.033674 | yes |
| Casing | DIF_cap_tissue | 0.040279 | yes |
| DIF_gill_tissue | YFB_stipe_center | 0.830740 | no |
| DIF_gill_tissue | YFB_stipe_shell | 0.896879 | no |
| DIF_gill_tissue | YFB_stipe_skin | 0.778504 | no |
| DIF_gill_tissue | YFB_cap_skin | 0.910605 | no |
| DIF_gill_tissue | YFB_cap_tissue | 0.494108 | no |
| DIF_gill_tissue | YFB_gill_tissue | 0.561022 | no |
| DIF_gill_tissue | YFB_veil | 0.917915 | no |
| YFB_stipe_center | YFB_stipe_shell | 0.683664 | no |
| YFB_stipe_center | YFB_stipe_skin | 0.543543 | no |
| YFB_stipe_center | YFB_cap_skin | 0.703660 | no |
| YFB_stipe_center | YFB_cap_tissue | 0.279372 | no |
| YFB_stipe_center | YFB_gill_tissue | 0.331440 | no |
| YFB_stipe_center | YFB_veil | 0.713907 | no |
| YFB_stipe_shell | YFB_stipe_skin | 0.912425 | no |
| YFB_stipe_shell | YFB_cap_skin | 0.988547 | no |
| YFB_stipe_shell | YFB_cap_tissue | 0.670585 | no |
| YFB_stipe_shell | YFB_gill_tissue | 0.729675 | no |
| YFB_stipe_shell | YFB_veil | 0.983610 | no |
| YFB_stipe_skin | YFB_cap_skin | 0.902086 | no |
| YFB_stipe_skin | YFB_cap_tissue | 0.798513 | no |
| YFB_stipe_skin | YFB_gill_tissue | 0.850267 | no |
| YFB_stipe_skin | YFB_veil | 0.892422 | no |
| YFB_cap_skin | YFB_cap_tissue | 0.651099 | no |
| YFB_cap_skin | YFB_gill_tissue | 0.712342 | no |
| YFB_cap_skin | YFB_veil | 0.993849 | no |
| YFB_cap_tissue | YFB_gill_tissue | 0.963953 | no |
| YFB_cap_tissue | YFB_veil | 0.640786 | no |
| YFB_gill_tissue | YFB_veil | 0.702845 | no |
| Initials | DIF_gill_tissue | 0.249200 | no |
| Initials | YFB_stipe_center | 0.461664 | no |
| Initials | YFB_stipe_shell | 0.158357 | no |
| Initials | YFB_stipe_skin | 0.089469 | no |
| Initials | YFB_cap_skin | 0.173213 | no |
| Initials | YFB_cap_tissue | 0.028675 | yes |
| Initials | YFB_gill_tissue | 0.039390 | yes |
| Initials | YFB_veil | 0.170621 | no |
| Initials | Pileal_Stipeal_center | 0.070681 | no |
| Initials | Pileal_Stipeal_shell | 0.133428 | no |
| Initials | DIF_stipe_center | 0.041824 | yes |
| Initials | DIF_stipe_shell | 0.034142 | yes |
| Initials | DIF_stipe_skin | 0.038047 | yes |
| Initials | DIF_cap_skin | 0.098276 | no |
| Initials | DIF_cap_tissue | 0.127930 | no |
| Pileal_Stipeal_center | DIF_gill_tissue | 0.730423 | no |
| Pileal_Stipeal_center | YFB_stipe_center | 0.480132 | no |
| Pileal_Stipeal_center | YFB_stipe_shell | 0.873485 | no |
| Pileal_Stipeal_center | YFB_stipe_skin | 0.968382 | no |
| Pileal_Stipeal_center | YFB_cap_skin | 0.863692 | no |
| Pileal_Stipeal_center | YFB_cap_tissue | 0.848908 | no |
| Pileal_Stipeal_center | YFB_gill_tissue | 0.894834 | no |
| Pileal_Stipeal_center | YFB_veil | 0.853479 | no |
| Pileal_Stipeal_center | Pileal_Stipeal_shell | 0.913761 | no |
| Pileal_Stipeal_center | DIF_stipe_center | 0.898778 | no |
| Pileal_Stipeal_center | DIF_stipe_shell | 0.890947 | no |
| Pileal_Stipeal_center | DIF_stipe_skin | 0.888350 | no |
| Pileal_Stipeal_center | DIF_cap_skin | 0.960002 | no |
| Pileal_Stipeal_center | DIF_cap_tissue | 0.914994 | no |
| Pileal_Stipeal_shell | DIF_gill_tissue | 0.857375 | no |
| Pileal_Stipeal_shell | YFB_stipe_center | 0.629077 | no |
| Pileal_Stipeal_shell | YFB_stipe_shell | 0.970626 | no |
| Pileal_Stipeal_shell | YFB_stipe_skin | 0.946926 | no |
| Pileal_Stipeal_shell | YFB_cap_skin | 0.959660 | no |
| Pileal_Stipeal_shell | YFB_cap_tissue | 0.717566 | no |
| Pileal_Stipeal_shell | YFB_gill_tissue | 0.776053 | no |
| Pileal_Stipeal_shell | YFB_veil | 0.954885 | no |
| Pileal_Stipeal_shell | DIF_stipe_center | 0.781755 | no |
| Pileal_Stipeal_shell | DIF_stipe_shell | 0.770809 | no |
| Pileal_Stipeal_shell | DIF_stipe_skin | 0.767054 | no |
| Pileal_Stipeal_shell | DIF_cap_skin | 0.955296 | no |
| Pileal_Stipeal_shell | DIF_cap_tissue | 0.996520 | no |
| DIF_stipe_center | DIF_gill_tissue | 0.566717 | no |
| DIF_stipe_center | YFB_stipe_center | 0.333711 | no |
| DIF_stipe_center | YFB_stipe_shell | 0.732490 | no |
| DIF_stipe_center | YFB_stipe_skin | 0.856739 | no |
| DIF_stipe_center | YFB_cap_skin | 0.720663 | no |
| DIF_stipe_center | YFB_cap_tissue | 0.959576 | no |
| DIF_stipe_center | YFB_gill_tissue | 0.995839 | no |
| DIF_stipe_center | YFB_veil | 0.709302 | no |
| DIF_stipe_center | DIF_stipe_shell | 0.990086 | no |
| DIF_stipe_center | DIF_stipe_skin | 0.990620 | no |
| DIF_stipe_center | DIF_cap_skin | 0.844173 | no |
| DIF_stipe_center | DIF_cap_tissue | 0.784191 | no |
| DIF_stipe_shell | DIF_gill_tissue | 0.549195 | no |
| DIF_stipe_shell | YFB_stipe_center | 0.320168 | no |
| DIF_stipe_shell | YFB_stipe_shell | 0.715637 | no |
| DIF_stipe_shell | YFB_stipe_skin | 0.845102 | no |
| DIF_stipe_shell | YFB_cap_skin | 0.703049 | no |
| DIF_stipe_shell | YFB_cap_tissue | 0.969357 | no |
| DIF_stipe_shell | YFB_gill_tissue | 0.993810 | no |
| DIF_stipe_shell | YFB_veil | 0.692582 | no |
| DIF_stipe_shell | DIF_stipe_skin | 0.999171 | no |
| DIF_stipe_shell | DIF_cap_skin | 0.831359 | no |
| DIF_stipe_shell | DIF_cap_tissue | 0.770332 | no |
| DIF_stipe_skin | DIF_gill_tissue | 0.549248 | no |
| DIF_stipe_skin | YFB_stipe_center | 0.328526 | no |
| DIF_stipe_skin | YFB_stipe_shell | 0.714657 | no |
| DIF_stipe_skin | YFB_stipe_skin | 0.845991 | no |
| DIF_stipe_skin | YFB_cap_skin | 0.702416 | no |
| DIF_stipe_skin | YFB_cap_tissue | 0.969011 | no |
| DIF_stipe_skin | YFB_gill_tissue | 0.995138 | no |
| DIF_stipe_skin | YFB_veil | 0.691399 | no |
| DIF_stipe_skin | DIF_cap_skin | 0.832818 | no |
| DIF_stipe_skin | DIF_cap_tissue | 0.770150 | no |
| DIF_cap_skin | DIF_gill_tissue | 0.793055 | no |
| DIF_cap_skin | YFB_stipe_center | 0.550865 | no |
| DIF_cap_skin | YFB_stipe_shell | 0.923993 | no |
| DIF_cap_skin | YFB_stipe_skin | 0.990107 | no |
| DIF_cap_skin | YFB_cap_skin | 0.912997 | no |
| DIF_cap_skin | YFB_cap_tissue | 0.786908 | no |
| DIF_cap_skin | YFB_gill_tissue | 0.839597 | no |
| DIF_cap_skin | YFB_veil | 0.905242 | no |
| DIF_cap_skin | DIF_cap_tissue | 0.959731 | no |
| DIF_cap_tissue | DIF_gill_tissue | 0.852143 | no |
| DIF_cap_tissue | YFB_stipe_center | 0.621080 | no |
| DIF_cap_tissue | YFB_stipe_shell | 0.967624 | no |
| DIF_cap_tissue | YFB_stipe_skin | 0.949564 | no |
| DIF_cap_tissue | YFB_cap_skin | 0.956739 | no |
| DIF_cap_tissue | YFB_cap_tissue | 0.722365 | no |
| DIF_cap_tissue | YFB_gill_tissue | 0.779718 | no |
| DIF_cap_tissue | YFB_veil | 0.951753 | no |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|115560 MQGLLNHSSSLNASSFRAARFCIARKFSSTAAREKQRVVILGSGWGGYGLLRGIDKKRYDVVVISPTTYFNFTPL LASTAVGTLEFRTAIEPVRRYVPAAVYYQAWCDNIDFSRKTLTCMPATRPITRESSDPTKVDDPNYRASANIPFT ARYDKLIIAVGAYSQTFNIPGVKEHAYFLKDVKDARRIRSRILECFEQANQPVISDVERRNLLNFCVVGGGPTGV EFAAELHDLLQTDVRTHYPDLARFTNITLYDVADSILSSFDQSLVKYTEKMFSREGVHILTNHHVERVEAGKLFI REKGEVPFGLLVWSTGLAPNPLVSAMSGVKKNPKTQSVITNDQLNVIMQETNEPNPDVWAIGDAATFEEAPLPAT AQVASQKAHYMITKLNTLAKDKDHCEPFEFHNQGSLAYIGNWNAIYDRSSTLPEGEKDKFMSKETGRVAWLLWRS AYFTMTLSWRNKILVPTYWFLNWMFGRDMTRF* |
| Coding | >AgabiH97|115560 ATGCAGGGGCTTCTTAATCACTCCTCTAGTCTCAATGCCTCTTCTTTCCGCGCCGCTCGTTTCTGCATCGCGCGA AAGTTCAGCTCAACGGCAGCGAGAGAGAAACAACGAGTCGTGATTTTAGGGTCTGGATGGGGCGGCTACGGTCTA CTACGAGGGATTGACAAGAAGCGTTACGATGTCGTTGTTATCTCGCCTACGACGTATTTCAACTTTACACCTCTC CTAGCTAGCACTGCTGTTGGAACACTCGAATTTCGGACTGCCATTGAACCAGTTCGAAGATATGTCCCTGCCGCG GTATACTATCAAGCTTGGTGCGATAATATTGATTTTAGTCGCAAGACCTTGACATGCATGCCTGCCACACGGCCA ATAACAAGAGAATCATCGGACCCAACCAAAGTTGACGATCCTAATTACCGAGCCTCGGCCAACATTCCATTTACT GCGCGTTACGATAAGCTTATAATCGCTGTTGGTGCTTATTCTCAAACCTTCAATATTCCTGGAGTGAAGGAACAT GCCTACTTCCTAAAAGATGTCAAAGATGCACGCCGAATCCGCAGTAGAATTCTTGAATGTTTCGAACAGGCAAAC CAGCCAGTTATATCTGACGTCGAGCGTCGTAATCTGCTCAATTTCTGTGTAGTTGGTGGAGGCCCAACAGGCGTC GAGTTTGCTGCAGAACTACACGATTTACTGCAGACGGACGTCCGTACTCATTATCCTGACCTCGCGAGATTTACA AATATCACGCTCTATGATGTTGCTGACAGCATTCTGAGTAGTTTTGATCAGTCACTTGTGAAATACACCGAGAAA ATGTTCTCTCGTGAAGGCGTTCACATTCTCACAAATCATCATGTAGAACGCGTCGAAGCGGGAAAATTGTTTATA CGGGAAAAGGGAGAAGTGCCTTTTGGGCTTCTTGTCTGGTCTACGGGCCTCGCACCAAATCCACTTGTTTCAGCA ATGAGCGGAGTCAAGAAGAACCCTAAGACCCAAAGCGTCATCACCAACGACCAGCTCAATGTTATCATGCAAGAA ACGAATGAACCAAATCCGGATGTCTGGGCTATCGGTGACGCAGCGACCTTTGAAGAGGCACCCTTACCAGCAACG GCTCAAGTCGCCTCCCAGAAAGCGCATTACATGATTACCAAACTTAATACTCTCGCGAAGGATAAGGACCATTGT GAACCCTTCGAGTTCCATAACCAGGGCAGTCTGGCGTACATTGGGAACTGGAATGCTATCTACGATCGTTCTTCG ACACTTCCGGAAGGAGAGAAGGACAAATTCATGTCGAAAGAAACAGGACGAGTAGCTTGGTTACTTTGGCGTTCC GCGTACTTTACTATGACGCTCAGTTGGAGGAACAAGATCTTGGTGCCAACTTACTGGTTTTTAAATTGGATGTTT GGGAGAGACATGACTCGATTCTAG |
| Transcript | >AgabiH97|115560 ATGCAGGGGCTTCTTAATCACTCCTCTAGTCTCAATGCCTCTTCTTTCCGCGCCGCTCGTTTCTGCATCGCGCGA AAGTTCAGCTCAACGGCAGCGAGAGAGAAACAACGAGTCGTGATTTTAGGGTCTGGATGGGGCGGCTACGGTCTA CTACGAGGGATTGACAAGAAGCGTTACGATGTCGTTGTTATCTCGCCTACGACGTATTTCAACTTTACACCTCTC CTAGCTAGCACTGCTGTTGGAACACTCGAATTTCGGACTGCCATTGAACCAGTTCGAAGATATGTCCCTGCCGCG GTATACTATCAAGCTTGGTGCGATAATATTGATTTTAGTCGCAAGACCTTGACATGCATGCCTGCCACACGGCCA ATAACAAGAGAATCATCGGACCCAACCAAAGTTGACGATCCTAATTACCGAGCCTCGGCCAACATTCCATTTACT GCGCGTTACGATAAGCTTATAATCGCTGTTGGTGCTTATTCTCAAACCTTCAATATTCCTGGAGTGAAGGAACAT GCCTACTTCCTAAAAGATGTCAAAGATGCACGCCGAATCCGCAGTAGAATTCTTGAATGTTTCGAACAGGCAAAC CAGCCAGTTATATCTGACGTCGAGCGTCGTAATCTGCTCAATTTCTGTGTAGTTGGTGGAGGCCCAACAGGCGTC GAGTTTGCTGCAGAACTACACGATTTACTGCAGACGGACGTCCGTACTCATTATCCTGACCTCGCGAGATTTACA AATATCACGCTCTATGATGTTGCTGACAGCATTCTGAGTAGTTTTGATCAGTCACTTGTGAAATACACCGAGAAA ATGTTCTCTCGTGAAGGCGTTCACATTCTCACAAATCATCATGTAGAACGCGTCGAAGCGGGAAAATTGTTTATA CGGGAAAAGGGAGAAGTGCCTTTTGGGCTTCTTGTCTGGTCTACGGGCCTCGCACCAAATCCACTTGTTTCAGCA ATGAGCGGAGTCAAGAAGAACCCTAAGACCCAAAGCGTCATCACCAACGACCAGCTCAATGTTATCATGCAAGAA ACGAATGAACCAAATCCGGATGTCTGGGCTATCGGTGACGCAGCGACCTTTGAAGAGGCACCCTTACCAGCAACG GCTCAAGTCGCCTCCCAGAAAGCGCATTACATGATTACCAAACTTAATACTCTCGCGAAGGATAAGGACCATTGT GAACCCTTCGAGTTCCATAACCAGGGCAGTCTGGCGTACATTGGGAACTGGAATGCTATCTACGATCGTTCTTCG ACACTTCCGGAAGGAGAGAAGGACAAATTCATGTCGAAAGAAACAGGACGAGTAGCTTGGTTACTTTGGCGTTCC GCGTACTTTACTATGACGCTCAGTTGGAGGAACAAGATCTTGGTGCCAACTTACTGGTTTTTAAATTGGATGTTT GGGAGAGACATGACTCGATTCTAG |
| Gene | >AgabiH97|115560 ATGCAGGGGCTTCTTAATCACTCCTCTAGTCTCAATGCCTCTTCTTTCCGCGCCGCTCGTTTCTGCATCGCGCGA AAGTTCAGCTCAACGGCAGCGAGAGAGAAACAACGAGTCGTGATTTTAGGGTCTGGATGGGGCGGCTACGGTCTA CTACGAGGGATTGACAAGAAGCGTTACGGTATGTTCTTTTTGATGTTATTCTTTTTCCCAAAGGTTACTCGGCTA ATTGATGCACATAGATGTCGTTGTTATCTCGCCTACGACGTATTTCAACTTTACACCTCTCCTAGCTAGCACTGC TGTTGGAACACTCGAATTTCGGACTGCCATTGAACCAGTCAGTGTTTTCGGTTTGTAGGTTAGCTACGTGGTTGT CTCACACACTCTCAGGTTCGAAGATATGTCCCTGCCGCGGTGCGTAATCGGCATTTAGACATGTTTTTTTTGGCT GAGGTGGCAGGATAGGTATACTATCAAGCTTGGTGCGATAATATTGGTATGCCCTGCCTTTCCTTCTACTTTTCC CGACCAAATTTGGACCTTTGAACAGATTTTAGTCGCAAGACCTTGACATGCGTGAGTACCCATGCTGCTGAAGTA CCTTGATTCATACCGACTTTTCGGTTTTCATAGATGCCTGCCACACGGCCAATAACAAGAGAATCATCGGACCCA ACCAAAGTTGACGATCCTAATTACCGAGCCTCGGCCAACATTCCATTTACTGCGCGTTACGATAAGCTTATAATC GCTGTTGGTGCTTATTCTCAAAGTATGCACTGTCTGTTGCTTTCTCTGGCAAAAAGTGCTTATGTCTTCCAGCCT TCAATATTCCTGGAGTGAAGGAACATGCCTACTTCCTAAAAGATGTCAAAGATGCACGCCGAATCCGCAGTAGAA TTCTTGAATGTATGTTTCACTCTAATCCTGGGCTCATATGTTTGAACTCATTGAATCGGATAGGTTTCGAACAGG CAAACCAGCCAGTTATATCTGACGTCGAGCGTCGTAATCTGCTCAATTTCTGTGTAGTTGGTATGCAGCCGCCTT CACCGAATCTGATAACGAGTTAATTCGGTCTTCTGAAGGTGGAGGCCCAACAGGCGTCGAGTTTGCTGCAGAACT ACACGATTTACTGCAGACGGACGTCCGTACTCATTATCCTGACCTCGCGAGATTTACAAATATCACGCTCTATGA TGTTGCTGACAGCATTCTGAGTAGTTTTGATCAGTCACTTGTGAAGTACATATATTTCTTTTATATCAGCACAAC GCTCACCAGATGAATAAAGATACACCGAGAAAATGTTCTCTCGTGAAGGCGTTCACATTCTCACAAATCATCATG TAGAACGCGTCGAAGCGGTATAGCTCTAAACTTCTCATTGTAAAATTATTATGCTAAACGACTTGAAGGGAAAAT TGTTTATACGGGAAAAGGGAGAAGGTATGTATGCCTTTTGCGTCCCCGTTATACGTTATTGAACTGGCGACAGTG CCTTTTGGGCTTCTTGTCTGGTCTACGGGCCTCGCACCAAATCCACTTGTTTCAGCAATGAGCGGAGTCAAGAAG AACCCTAAGACCCAAAGGTTCGTCCATAGATTATCCGATGGCCATTGATTTACCATATATCGATCGGGCGAATTT CAGCGTCATCACCAACGACCAGCTCAATGTTATCATGCAAGAAACGAATGAACCAAATCCGGATGTCTGGGCTAT CGGTGACGCAGCGACCTTTGAAGAGGCACCCTTACCAGCAACGGCTCAAGGTACCCGCTTTTTCAAGGATCGTTT ATCTTAGTTAACCTATACCTCAGTCGCCTCCCAGAAAGCGCATTACATGATTACCAAACTTAATACTCTCGCGAA GGATAAGGACCATTGTGAACCCTTCGAGTTCCATAACCAGGGCAGTCTGGCGTACATTGGGAACTGGTCAGGCGA CTTACATATCCTGACGCTCGAACTCAGACTGATAATCATGTTAGGAATGCTATCTACGATCGTTCTTCGACACTT CCGGAAGGAGAGAAGGACAAATTCATGTCGAAAGAAACAGGACGAGTAGCTTGGTTACTTTGGCGTTCCGCGTAC TTTACTATGACGCTCAGTTGGAGGAACAAGTAAGTCCTGGATTGCTAAAGGTACAAGTTGCATACTCAACATGTT TATTCCAGGATCTTGGTGCCAACTTACTGGTTTTTAAATTGTGAGTATCGATTGAGGTTTGATATTCGATCTCTT CTGATTCACCACTTCAGGGATGTTTGGGAGAGACATGACTCGATTCTAG |