Fungal Genomics

at Utrecht University

General Properties

Protein ID	AgabiH97\|115520
Gene name
Location	scaffold_9:497111..498428
Strand	-
Gene length (bp)	1317
Transcript length (bp)	936
Coding sequence length (bp)	936
Protein length (aa)	312

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01575	MaoC_dehydratas	MaoC like domain	2.0E-27	176	285

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q9VXJ0\|DHB4_DROME	Peroxisomal multifunctional enzyme type 2 OS=Drosophila melanogaster GN=Mfe2 PE=1 SV=1	20	311	4.0E-42
sp\|Q54XZ0\|MFEB_DICDI	Probable enoyl-CoA hydratase 2 OS=Dictyostelium discoideum GN=mfeB PE=2 SV=1	1	304	9.0E-42
sp\|P51659\|DHB4_HUMAN	Peroxisomal multifunctional enzyme type 2 OS=Homo sapiens GN=HSD17B4 PE=1 SV=3	9	303	6.0E-36
sp\|P97852\|DHB4_RAT	Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus GN=Hsd17b4 PE=1 SV=3	2	303	4.0E-35
sp\|P51660\|DHB4_MOUSE	Peroxisomal multifunctional enzyme type 2 OS=Mus musculus GN=Hsd17b4 PE=1 SV=3	9	303	8.0E-34

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q9VXJ0\|DHB4_DROME	Peroxisomal multifunctional enzyme type 2 OS=Drosophila melanogaster GN=Mfe2 PE=1 SV=1	20	311	4.0E-42
sp\|Q54XZ0\|MFEB_DICDI	Probable enoyl-CoA hydratase 2 OS=Dictyostelium discoideum GN=mfeB PE=2 SV=1	1	304	9.0E-42
sp\|P51659\|DHB4_HUMAN	Peroxisomal multifunctional enzyme type 2 OS=Homo sapiens GN=HSD17B4 PE=1 SV=3	9	303	6.0E-36
sp\|P97852\|DHB4_RAT	Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus GN=Hsd17b4 PE=1 SV=3	2	303	4.0E-35
sp\|P51660\|DHB4_MOUSE	Peroxisomal multifunctional enzyme type 2 OS=Mus musculus GN=Hsd17b4 PE=1 SV=3	9	303	8.0E-34
sp\|Q8VYI3\|ECH2_ARATH	Enoyl-CoA hydratase 2, peroxisomal OS=Arabidopsis thaliana GN=ECH2 PE=1 SV=1	8	298	2.0E-33
sp\|Q01373\|FOX2_NEUCR	Peroxisomal hydratase-dehydrogenase-epimerase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=fox-2 PE=1 SV=1	3	301	8.0E-31
sp\|P22414\|FOX2_CANTR	Peroxisomal hydratase-dehydrogenase-epimerase OS=Candida tropicalis PE=1 SV=2	23	296	7.0E-23
sp\|Q02207\|FOX2_YEAST	Peroxisomal hydratase-dehydrogenase-epimerase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FOX2 PE=2 SV=1	13	273	3.0E-21

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GO

(None)

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 35	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>AgabiH97\|115520 MSADLSKVVGFTLPDKPVAWTTRDLLLYAAGVGAKKDELHLAYELDKNFTPMPTYPVVLPLKGDSQEINLFSERV KGRPVPGMPPMDPNRLVHGSQSIEIIKDIPLVSGPGWSWKSKYTGVSENKSGIVVVVENTLVSPTGEIYAKLYSS SFNIGAKATGEKFNKSIAGPPNAKPIPKRSPDHTVPDATSPEQALVFRLSGDYNPLHIDPSIGERLGFGGVILHG LSTFGFAARAIIKSVGNNDPKSLKFFGVRFTSPVKPGDKLETQAWEVGPGPEGTTEVTFITKNMTSGKVCIGGGI AYVKKPSHAKL*
Coding	>AgabiH97\|115520 ATGTCTGCAGATCTTTCTAAAGTCGTTGGTTTCACTCTCCCGGACAAGCCTGTTGCTTGGACAACCCGCGACCTA CTACTTTATGCCGCCGGTGTTGGTGCGAAGAAAGATGAACTTCACTTAGCCTATGAACTCGACAAAAACTTTACT CCCATGCCCACATATCCTGTTGTCTTGCCTTTGAAGGGTGACAGTCAAGAAATTAACTTGTTTTCTGAGCGGGTC AAGGGTAGACCTGTTCCTGGTATGCCTCCAATGGATCCTAATCGTCTGGTTCATGGTTCGCAATCTATTGAGATT ATTAAGGATATACCTTTGGTTTCAGGACCTGGATGGTCGTGGAAATCAAAGTACACAGGCGTCAGCGAGAATAAG TCTGGGATTGTTGTCGTTGTGGAGAATACACTGGTCAGTCCCACTGGTGAAATCTACGCGAAGCTCTACAGCTCG TCGTTCAACATTGGGGCCAAGGCCACGGGTGAAAAATTCAACAAATCCATCGCCGGTCCACCCAACGCGAAACCC ATTCCCAAGCGTTCTCCAGACCACACAGTACCTGACGCTACATCTCCCGAACAAGCCCTCGTCTTCCGTCTTAGC GGAGACTACAACCCTCTACATATTGATCCTTCAATTGGAGAACGTCTTGGGTTTGGAGGTGTCATTCTTCATGGC TTGTCAACCTTTGGGTTCGCTGCGAGAGCGATTATTAAATCTGTTGGAAATAATGACCCGAAGAGTTTGAAATTC TTTGGTGTGAGGTTTACTAGTCCTGTTAAACCTGGTGATAAGCTTGAGACTCAAGCTTGGGAGGTTGGGCCTGGA CCGGAGGGGACCACTGAGGTGACTTTTATCACCAAGAATATGACTAGTGGGAAGGTCTGTATCGGGGGTGGGATC GCGTATGTTAAGAAACCTTCTCATGCTAAACTCTAA
Transcript	>AgabiH97\|115520 ATGTCTGCAGATCTTTCTAAAGTCGTTGGTTTCACTCTCCCGGACAAGCCTGTTGCTTGGACAACCCGCGACCTA CTACTTTATGCCGCCGGTGTTGGTGCGAAGAAAGATGAACTTCACTTAGCCTATGAACTCGACAAAAACTTTACT CCCATGCCCACATATCCTGTTGTCTTGCCTTTGAAGGGTGACAGTCAAGAAATTAACTTGTTTTCTGAGCGGGTC AAGGGTAGACCTGTTCCTGGTATGCCTCCAATGGATCCTAATCGTCTGGTTCATGGTTCGCAATCTATTGAGATT ATTAAGGATATACCTTTGGTTTCAGGACCTGGATGGTCGTGGAAATCAAAGTACACAGGCGTCAGCGAGAATAAG TCTGGGATTGTTGTCGTTGTGGAGAATACACTGGTCAGTCCCACTGGTGAAATCTACGCGAAGCTCTACAGCTCG TCGTTCAACATTGGGGCCAAGGCCACGGGTGAAAAATTCAACAAATCCATCGCCGGTCCACCCAACGCGAAACCC ATTCCCAAGCGTTCTCCAGACCACACAGTACCTGACGCTACATCTCCCGAACAAGCCCTCGTCTTCCGTCTTAGC GGAGACTACAACCCTCTACATATTGATCCTTCAATTGGAGAACGTCTTGGGTTTGGAGGTGTCATTCTTCATGGC TTGTCAACCTTTGGGTTCGCTGCGAGAGCGATTATTAAATCTGTTGGAAATAATGACCCGAAGAGTTTGAAATTC TTTGGTGTGAGGTTTACTAGTCCTGTTAAACCTGGTGATAAGCTTGAGACTCAAGCTTGGGAGGTTGGGCCTGGA CCGGAGGGGACCACTGAGGTGACTTTTATCACCAAGAATATGACTAGTGGGAAGGTCTGTATCGGGGGTGGGATC GCGTATGTTAAGAAACCTTCTCATGCTAAACTCTAA
Gene	>AgabiH97\|115520 ATGTCTGCAGATCTTTCTAAAGTCGTTGGTTTCACTCTCCCGGACAAGCCTGTATGCCCTGTAATTCGCACTATG TGTCACCCAAGTTGACAATCAATTTCTAGGTTGCTTGGACAACCCGCGACCTACTACTTTATGCCGCCGGTGTTG GTGCGAAGAAAGATGAACTTCACTTAGCCTATGGTGTGTACTGCTCTTCATGCTATGTAGAATCATCTAATTCTT CTTCAAGAACTCGGTGAGAGCTTTAGGTCTTTCATAAGACCACAGATACTAAGCCAGCACATGCACAAAAGACAA AAACTTTACTCCCATGCCCACATATCCTGTTGTCTTGCCTTTGAAGGGTGACAGTCAAGAAATTAACTTGTTTTC TGAGCGGGTCAAGGGTAGACCTGTTCCTGGTATGCCTCCAATGGATCCTAATCGTCTGGTACGTGCTGGTTAGTC AGGTGAATGACGTTAGTACTTACGAAGAGGCTTTTTCAGGTTCATGGTTCGCAATCTATTGAGATTATTAAGGAT ATACCTTTGGTTTCAGGACCTGGATGGTCGTGGAAATCAAAGTACACAGGCGTCAGCGAGAATAGTATGTCTTTC TGCATGTTTGGCGTGAACGTGGAATTTAACTGACATTGATTTCTTCTCGTACCAGAGTCTGGGATTGTTGTCGTT GTGGAGAATACACTGGTCAGTCCCACTGGTGAAATCTACGCGAAGCTCTACGTATGTTATCCAAATTAACCCATT CTCGACTTTCAATAACACCTTGGATAGAGCTCGTCGTTCAACATTGGGGCCAAGGCCACGGGTGAAAAATTCAAC AAATCCATCGCCGGTCCACCCAACGCGAAACCCATTCCCAAGCGTTCTCCAGACCACACAGTACCTGACGCTACA TCTCCCGAACAAGCCCTCGTCTTCCGTCTTAGCGGAGACTACAACCCTCTACATATTGATCCTTCAATTGGAGAA CGTCTTGGGTTTGGAGGTGTCATTCTTCATGGCTTGTCAACCTTTGGGTTCGCTGCGAGAGCGATTATTAAATCT GTTGGAAATAATGACCCGAAGAGTTTGAAATTCTTTGGTGTGAGGTTTACTAGTCCTGTTAAACCTGGTGATAAG CTTGAGACTCAAGCTTGGGAGGTTGGGCCTGGACCGGAGGGGACCACTGAGGTGACTTTTATCACCAAGAATATG ACTAGTGGGAAGGTAAGTCTTGGAGATACGGTTATTGTCCGAAAGTTGACGTTCTTTCAGGTCTGTATCGGGGGT GGGATCGCGTATGTTAAGAAACCTTCTCATGCTAAACTCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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