Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|115340
Gene name
Locationscaffold_9:450163..451268
Strand-
Gene length (bp)1105
Transcript length (bp)855
Coding sequence length (bp)855
Protein length (aa) 285

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01328 Peroxidase_2 Peroxidase, family 2 1.4E-49 49 243

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q00668|STCC_EMENI Putative sterigmatocystin biosynthesis peroxidase stcC OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=stcC PE=3 SV=2 49 254 3.0E-17
sp|P04963|PRXC_LEPFU Chloroperoxidase OS=Leptoxyphium fumago GN=CPO PE=1 SV=3 41 143 4.0E-08

GO

GO Term Description Terminal node
GO:0004601 peroxidase activity Yes
GO:0003674 molecular_function No
GO:0016491 oxidoreductase activity No
GO:0016209 antioxidant activity No
GO:0003824 catalytic activity No
GO:0016684 oxidoreductase activity, acting on peroxide as acceptor No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 29 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|115340
MFILFKIFHDIAFFSWDLGLTFVNLVLPNRPVGKVTPEGHPGYGGKWPEYIPPKEGDSRCSCPALNAMANHGILP
RDGKNIQFKEMGRLIRTTYNFSSSFCYFVPHYAAEKVVKKDYNKDTFNLDELDHHNGIEHDASLCREDSALCPDQ
SKPHVEYITQLLAHATGKDKDGNPLLTMKDLAKYSSKRRADARSYNKKFTLGFIHRMFGSSNSSTMLTIFGGRVK
DLETVLLEERLPENWESRVRGKMGLTFAAFNLTVTPVELMISEKKYLKEKAAKEANKDD*
Coding >AgabiH97|115340
ATGTTCATCCTTTTCAAGATTTTTCACGACATCGCCTTCTTTTCATGGGACCTCGGTCTGACTTTTGTAAACCTC
GTCCTTCCGAACAGGCCAGTGGGGAAGGTTACGCCAGAGGGTCATCCCGGGTATGGTGGAAAATGGCCTGAATAT
ATTCCTCCAAAGGAGGGTGATAGCAGATGCTCATGTCCGGCATTGAACGCTATGGCGAATCATGGTATACTCCCT
CGTGACGGCAAAAACATCCAGTTCAAAGAGATGGGCAGACTTATCAGGACCACCTACAACTTTTCTTCGAGTTTC
TGCTACTTCGTACCCCACTACGCCGCCGAAAAAGTAGTGAAGAAGGATTATAACAAAGACACGTTTAATCTTGAC
GAACTTGATCATCACAATGGTATAGAGCATGACGCTTCTCTCTGTCGCGAAGATAGCGCCCTCTGTCCCGATCAA
AGCAAGCCTCATGTCGAATACATCACGCAACTTCTTGCACACGCCACAGGCAAGGACAAAGATGGCAATCCTCTC
CTCACCATGAAGGATCTTGCAAAGTACTCATCCAAACGTCGCGCTGATGCCCGAAGCTATAATAAGAAATTCACT
CTCGGCTTTATTCATCGCATGTTTGGAAGTTCCAACTCATCCACTATGCTGACCATTTTCGGTGGACGTGTCAAA
GATCTTGAAACTGTCTTACTTGAAGAACGACTTCCCGAGAATTGGGAATCGAGGGTTCGGGGAAAGATGGGCTTG
ACATTCGCGGCATTCAATCTCACAGTGACACCGGTCGAGCTTATGATCAGTGAAAAGAAATATCTTAAAGAAAAG
GCTGCCAAGGAAGCCAACAAAGACGATTAA
Transcript >AgabiH97|115340
ATGTTCATCCTTTTCAAGATTTTTCACGACATCGCCTTCTTTTCATGGGACCTCGGTCTGACTTTTGTAAACCTC
GTCCTTCCGAACAGGCCAGTGGGGAAGGTTACGCCAGAGGGTCATCCCGGGTATGGTGGAAAATGGCCTGAATAT
ATTCCTCCAAAGGAGGGTGATAGCAGATGCTCATGTCCGGCATTGAACGCTATGGCGAATCATGGTATACTCCCT
CGTGACGGCAAAAACATCCAGTTCAAAGAGATGGGCAGACTTATCAGGACCACCTACAACTTTTCTTCGAGTTTC
TGCTACTTCGTACCCCACTACGCCGCCGAAAAAGTAGTGAAGAAGGATTATAACAAAGACACGTTTAATCTTGAC
GAACTTGATCATCACAATGGTATAGAGCATGACGCTTCTCTCTGTCGCGAAGATAGCGCCCTCTGTCCCGATCAA
AGCAAGCCTCATGTCGAATACATCACGCAACTTCTTGCACACGCCACAGGCAAGGACAAAGATGGCAATCCTCTC
CTCACCATGAAGGATCTTGCAAAGTACTCATCCAAACGTCGCGCTGATGCCCGAAGCTATAATAAGAAATTCACT
CTCGGCTTTATTCATCGCATGTTTGGAAGTTCCAACTCATCCACTATGCTGACCATTTTCGGTGGACGTGTCAAA
GATCTTGAAACTGTCTTACTTGAAGAACGACTTCCCGAGAATTGGGAATCGAGGGTTCGGGGAAAGATGGGCTTG
ACATTCGCGGCATTCAATCTCACAGTGACACCGGTCGAGCTTATGATCAGTGAAAAGAAATATCTTAAAGAAAAG
GCTGCCAAGGAAGCCAACAAAGACGATTAA
Gene >AgabiH97|115340
ATGTTCATCCTTTTCAAGATTTTTCACGACATCGCCTTCTTTTCATGGGACCTCGGTCTGACTTTTGTAAACCTC
GTCCTTCCGAACAGGCCAGTGGGGAAGGTTACGCCAGAGGGTCATCCCGGGTATGGTGGAAAATGGCCTGAATAT
ATTCCTCCAAAGGAGGGTGATAGCAGATGCTCATGTCCGGCATTGAACGCTATGGCGAATCATGGTGAGATCTCC
CTTGTAAAATAAAAAAAGACTTCATGTGTGATTTTAACACACATTGTTAACCTAGGTATACTCCCTCGTGACGGC
AAAAACATCCAGTTCAAAGAGATGGGCAGACTTATCAGGACCACCTACAACTTTTCTTCGAGTTTCTGCTACTTC
GTACCCCACTACGCCGCCGAAAAAGTAGTGAAGAAGGATTATAACAAAGACACGTTTAATCTTGACGAACTTGAT
CATCACAATGGTATAGAGCATGACGCTTCTCTCTGTCGTAAGTTCATCATCTTGTTTAAACAAATTCGGCAGCCA
ACTAACTCGCCCCTTGTTCACCAGGCGAAGATAGCGCCCTCTGTCCCGATCAAAGCAAGCCTCATGTCGAATACA
TCACGCAACTTCTTGCACACGCCACAGGCAAGGACAAAGATGGCAATCCTCTCCTCACCATGAAGGATCTTGCAA
AGTACTCATCCAAACGTCGCGCTGATGCCCGAAGCTATAATAAGAAATTCACTCTCGGCTTTATTCATCGCATGT
TTGGAAGTTCCAAGTGAGTCATCTGTCGATAATCAGTTTTACTAGGACTGACAAATGATGTGATGTACGTGATAT
ATCAGCTCATCCACTATGCTGACCATTTTCGGTGGACGTGTCAAAGATCTTGAAACTGTCTTACTTGAAGAACGA
CTTCCCGAGAATTGGGAATCGAGGGTTCGGGGAAAGATGGGCTTGACATTCGCGGCATTCAATCTCACAGTGACA
CCGGTCGAGCTTATGATCAGTGAAAAGAAATATCTTAAAGAAAAGGCTGCCAAGGAAGCCAACAAAGACGGTGCT
TCTGCTGTCCCGAACCCTGATATACCATGAAACTGATTTAATGTCATGAGATTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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