Fungal Genomics

at Utrecht University

General Properties

Protein ID	AgabiH97\|115340
Gene name
Location	scaffold_9:450163..451268
Strand	-
Gene length (bp)	1105
Transcript length (bp)	855
Coding sequence length (bp)	855
Protein length (aa)	285

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01328	Peroxidase_2	Peroxidase, family 2	1.4E-49	49	243

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q00668\|STCC_EMENI	Putative sterigmatocystin biosynthesis peroxidase stcC OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=stcC PE=3 SV=2	49	254	3.0E-17
sp\|P04963\|PRXC_LEPFU	Chloroperoxidase OS=Leptoxyphium fumago GN=CPO PE=1 SV=3	41	143	4.0E-08

GO

GO Term	Description	Terminal node
GO:0004601	peroxidase activity	Yes
GO:0003674	molecular_function	No
GO:0016491	oxidoreductase activity	No
GO:0016209	antioxidant activity	No
GO:0003824	catalytic activity	No
GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 29	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>AgabiH97\|115340 MFILFKIFHDIAFFSWDLGLTFVNLVLPNRPVGKVTPEGHPGYGGKWPEYIPPKEGDSRCSCPALNAMANHGILP RDGKNIQFKEMGRLIRTTYNFSSSFCYFVPHYAAEKVVKKDYNKDTFNLDELDHHNGIEHDASLCREDSALCPDQ SKPHVEYITQLLAHATGKDKDGNPLLTMKDLAKYSSKRRADARSYNKKFTLGFIHRMFGSSNSSTMLTIFGGRVK DLETVLLEERLPENWESRVRGKMGLTFAAFNLTVTPVELMISEKKYLKEKAAKEANKDD*
Coding	>AgabiH97\|115340 ATGTTCATCCTTTTCAAGATTTTTCACGACATCGCCTTCTTTTCATGGGACCTCGGTCTGACTTTTGTAAACCTC GTCCTTCCGAACAGGCCAGTGGGGAAGGTTACGCCAGAGGGTCATCCCGGGTATGGTGGAAAATGGCCTGAATAT ATTCCTCCAAAGGAGGGTGATAGCAGATGCTCATGTCCGGCATTGAACGCTATGGCGAATCATGGTATACTCCCT CGTGACGGCAAAAACATCCAGTTCAAAGAGATGGGCAGACTTATCAGGACCACCTACAACTTTTCTTCGAGTTTC TGCTACTTCGTACCCCACTACGCCGCCGAAAAAGTAGTGAAGAAGGATTATAACAAAGACACGTTTAATCTTGAC GAACTTGATCATCACAATGGTATAGAGCATGACGCTTCTCTCTGTCGCGAAGATAGCGCCCTCTGTCCCGATCAA AGCAAGCCTCATGTCGAATACATCACGCAACTTCTTGCACACGCCACAGGCAAGGACAAAGATGGCAATCCTCTC CTCACCATGAAGGATCTTGCAAAGTACTCATCCAAACGTCGCGCTGATGCCCGAAGCTATAATAAGAAATTCACT CTCGGCTTTATTCATCGCATGTTTGGAAGTTCCAACTCATCCACTATGCTGACCATTTTCGGTGGACGTGTCAAA GATCTTGAAACTGTCTTACTTGAAGAACGACTTCCCGAGAATTGGGAATCGAGGGTTCGGGGAAAGATGGGCTTG ACATTCGCGGCATTCAATCTCACAGTGACACCGGTCGAGCTTATGATCAGTGAAAAGAAATATCTTAAAGAAAAG GCTGCCAAGGAAGCCAACAAAGACGATTAA
Transcript	>AgabiH97\|115340 ATGTTCATCCTTTTCAAGATTTTTCACGACATCGCCTTCTTTTCATGGGACCTCGGTCTGACTTTTGTAAACCTC GTCCTTCCGAACAGGCCAGTGGGGAAGGTTACGCCAGAGGGTCATCCCGGGTATGGTGGAAAATGGCCTGAATAT ATTCCTCCAAAGGAGGGTGATAGCAGATGCTCATGTCCGGCATTGAACGCTATGGCGAATCATGGTATACTCCCT CGTGACGGCAAAAACATCCAGTTCAAAGAGATGGGCAGACTTATCAGGACCACCTACAACTTTTCTTCGAGTTTC TGCTACTTCGTACCCCACTACGCCGCCGAAAAAGTAGTGAAGAAGGATTATAACAAAGACACGTTTAATCTTGAC GAACTTGATCATCACAATGGTATAGAGCATGACGCTTCTCTCTGTCGCGAAGATAGCGCCCTCTGTCCCGATCAA AGCAAGCCTCATGTCGAATACATCACGCAACTTCTTGCACACGCCACAGGCAAGGACAAAGATGGCAATCCTCTC CTCACCATGAAGGATCTTGCAAAGTACTCATCCAAACGTCGCGCTGATGCCCGAAGCTATAATAAGAAATTCACT CTCGGCTTTATTCATCGCATGTTTGGAAGTTCCAACTCATCCACTATGCTGACCATTTTCGGTGGACGTGTCAAA GATCTTGAAACTGTCTTACTTGAAGAACGACTTCCCGAGAATTGGGAATCGAGGGTTCGGGGAAAGATGGGCTTG ACATTCGCGGCATTCAATCTCACAGTGACACCGGTCGAGCTTATGATCAGTGAAAAGAAATATCTTAAAGAAAAG GCTGCCAAGGAAGCCAACAAAGACGATTAA
Gene	>AgabiH97\|115340 ATGTTCATCCTTTTCAAGATTTTTCACGACATCGCCTTCTTTTCATGGGACCTCGGTCTGACTTTTGTAAACCTC GTCCTTCCGAACAGGCCAGTGGGGAAGGTTACGCCAGAGGGTCATCCCGGGTATGGTGGAAAATGGCCTGAATAT ATTCCTCCAAAGGAGGGTGATAGCAGATGCTCATGTCCGGCATTGAACGCTATGGCGAATCATGGTGAGATCTCC CTTGTAAAATAAAAAAAGACTTCATGTGTGATTTTAACACACATTGTTAACCTAGGTATACTCCCTCGTGACGGC AAAAACATCCAGTTCAAAGAGATGGGCAGACTTATCAGGACCACCTACAACTTTTCTTCGAGTTTCTGCTACTTC GTACCCCACTACGCCGCCGAAAAAGTAGTGAAGAAGGATTATAACAAAGACACGTTTAATCTTGACGAACTTGAT CATCACAATGGTATAGAGCATGACGCTTCTCTCTGTCGTAAGTTCATCATCTTGTTTAAACAAATTCGGCAGCCA ACTAACTCGCCCCTTGTTCACCAGGCGAAGATAGCGCCCTCTGTCCCGATCAAAGCAAGCCTCATGTCGAATACA TCACGCAACTTCTTGCACACGCCACAGGCAAGGACAAAGATGGCAATCCTCTCCTCACCATGAAGGATCTTGCAA AGTACTCATCCAAACGTCGCGCTGATGCCCGAAGCTATAATAAGAAATTCACTCTCGGCTTTATTCATCGCATGT TTGGAAGTTCCAAGTGAGTCATCTGTCGATAATCAGTTTTACTAGGACTGACAAATGATGTGATGTACGTGATAT ATCAGCTCATCCACTATGCTGACCATTTTCGGTGGACGTGTCAAAGATCTTGAAACTGTCTTACTTGAAGAACGA CTTCCCGAGAATTGGGAATCGAGGGTTCGGGGAAAGATGGGCTTGACATTCGCGGCATTCAATCTCACAGTGACA CCGGTCGAGCTTATGATCAGTGAAAAGAAATATCTTAAAGAAAAGGCTGCCAAGGAAGCCAACAAAGACGGTGCT TCTGCTGTCCCGAACCCTGATATACCATGAAACTGATTTAATGTCATGAGATTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail