Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|114240
Gene name
Locationscaffold_9:175190..177792
Strand-
Gene length (bp)2602
Transcript length (bp)2235
Coding sequence length (bp)2235
Protein length (aa) 745

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00384 Molybdopterin Molybdopterin oxidoreductase 5.2E-61 309 638
PF13510 Fer2_4 2Fe-2S iron-sulfur cluster binding domain 2.0E-19 37 112
PF10588 NADH-G_4Fe-4S_3 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 3.4E-17 119 158
PF09326 NADH_dhqG_C NADH-ubiquinone oxidoreductase subunit G, C-terminal 1.6E-15 687 721
PF00111 Fer2 2Fe-2S iron-sulfur cluster binding domain 8.6E-09 41 101

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|P29915|NQO3_PARDE NADH-quinone oxidoreductase chain 3 OS=Paracoccus denitrificans GN=nqo3 PE=1 SV=4 40 722 0.0E+00
sp|P24918|NDUS1_NEUCR NADH-ubiquinone oxidoreductase 78 kDa subunit, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=nuo78 PE=1 SV=2 1 722 0.0E+00
sp|Q92G92|NUOG_RICCN NADH-quinone oxidoreductase subunit G OS=Rickettsia conorii (strain ATCC VR-613 / Malish 7) GN=nuoG PE=3 SV=2 38 722 0.0E+00
sp|Q68VV2|NUOG_RICTY NADH-quinone oxidoreductase subunit G OS=Rickettsia typhi (strain ATCC VR-144 / Wilmington) GN=nuoG PE=3 SV=1 38 722 0.0E+00
sp|Q9ZCF6|NUOG_RICPR NADH-quinone oxidoreductase subunit G OS=Rickettsia prowazekii (strain Madrid E) GN=nuoG PE=3 SV=1 38 722 0.0E+00
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|P29915|NQO3_PARDE NADH-quinone oxidoreductase chain 3 OS=Paracoccus denitrificans GN=nqo3 PE=1 SV=4 40 722 0.0E+00
sp|P24918|NDUS1_NEUCR NADH-ubiquinone oxidoreductase 78 kDa subunit, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=nuo78 PE=1 SV=2 1 722 0.0E+00
sp|Q92G92|NUOG_RICCN NADH-quinone oxidoreductase subunit G OS=Rickettsia conorii (strain ATCC VR-613 / Malish 7) GN=nuoG PE=3 SV=2 38 722 0.0E+00
sp|Q68VV2|NUOG_RICTY NADH-quinone oxidoreductase subunit G OS=Rickettsia typhi (strain ATCC VR-144 / Wilmington) GN=nuoG PE=3 SV=1 38 722 0.0E+00
sp|Q9ZCF6|NUOG_RICPR NADH-quinone oxidoreductase subunit G OS=Rickettsia prowazekii (strain Madrid E) GN=nuoG PE=3 SV=1 38 722 0.0E+00
sp|Q4UK22|NUOG_RICFE NADH-quinone oxidoreductase subunit G OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) GN=nuoG PE=3 SV=1 38 722 0.0E+00
sp|Q1RKD2|NUOG_RICBR NADH-quinone oxidoreductase subunit G OS=Rickettsia bellii (strain RML369-C) GN=nuoG PE=3 SV=1 38 722 0.0E+00
sp|Q9FGI6|NDUS1_ARATH NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial OS=Arabidopsis thaliana GN=EMB1467 PE=1 SV=2 38 727 0.0E+00
sp|O21241|NDUS1_RECAM NADH-ubiquinone oxidoreductase 75 kDa subunit OS=Reclinomonas americana GN=NAD11 PE=3 SV=1 38 722 0.0E+00
sp|Q94511|NDUS1_DROME NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Drosophila melanogaster GN=ND-75 PE=2 SV=3 38 721 0.0E+00
sp|Q0MQG1|NDUS1_GORGO NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Gorilla gorilla gorilla GN=NDUFS1 PE=2 SV=1 38 735 0.0E+00
sp|P15690|NDUS1_BOVIN NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Bos taurus GN=NDUFS1 PE=1 SV=1 1 735 0.0E+00
sp|Q91VD9|NDUS1_MOUSE NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Mus musculus GN=Ndufs1 PE=1 SV=2 38 735 0.0E+00
sp|Q66HF1|NDUS1_RAT NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Rattus norvegicus GN=Ndufs1 PE=1 SV=1 38 735 0.0E+00
sp|P0CB68|NDUS1_PONPY NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Pongo pygmaeus GN=NDUFS1 PE=2 SV=1 38 735 0.0E+00
sp|P28331|NDUS1_HUMAN NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Homo sapiens GN=NDUFS1 PE=1 SV=3 38 735 0.0E+00
sp|Q43644|NDUS1_SOLTU NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial OS=Solanum tuberosum PE=2 SV=1 38 722 0.0E+00
sp|Q4R6K9|NDUS1_MACFA NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Macaca fascicularis GN=NDUFS1 PE=2 SV=1 38 735 0.0E+00
sp|Q0MQG2|NDUS1_PANTR NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Pan troglodytes GN=NDUFS1 PE=2 SV=1 38 735 0.0E+00
sp|P0CB67|NDUS1_PONAB NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Pongo abelii GN=NDUFS1 PE=2 SV=1 38 735 0.0E+00
sp|Q37373|NDUS1_ACACA NADH-ubiquinone oxidoreductase 75 kDa subunit OS=Acanthamoeba castellanii GN=NAD11 PE=3 SV=1 37 728 4.0E-168
sp|Q34312|NDUS1_DICDI NADH-ubiquinone oxidoreductase 75 kDa subunit OS=Dictyostelium discoideum GN=nad11 PE=3 SV=1 54 715 2.0E-124
sp|Q2LCP5|NDUS1_DICCI NADH-ubiquinone oxidoreductase 75 kDa subunit OS=Dictyostelium citrinum GN=nad11 PE=3 SV=2 54 718 5.0E-124
sp|Q9XAR0|NUOG_STRCO NADH-quinone oxidoreductase subunit G OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) GN=nuoG PE=3 SV=1 38 656 1.0E-77
sp|Q56223|NQO3_THET8 NADH-quinone oxidoreductase subunit 3 OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=nqo3 PE=1 SV=2 38 651 3.0E-69
sp|P9WIV9|NUOG_MYCTU NADH-quinone oxidoreductase subunit G OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=nuoG PE=1 SV=1 38 432 9.0E-65
sp|P9WIV8|NUOG_MYCTO NADH-quinone oxidoreductase subunit G OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=nuoG PE=3 SV=1 38 432 9.0E-65
sp|P59962|NUOG_MYCBO NADH-quinone oxidoreductase subunit G OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=nuoG PE=3 SV=1 38 432 9.0E-65
sp|P56914|NUOG2_RHIME NADH-quinone oxidoreductase subunit G 2 OS=Rhizobium meliloti (strain 1021) GN=nuoG2 PE=3 SV=2 38 341 1.0E-64
sp|Q9KGW3|NUOG_PSEFL NADH-quinone oxidoreductase subunit G OS=Pseudomonas fluorescens GN=nuoG PE=2 SV=1 39 614 3.0E-59
sp|Q8EI34|NUOG_SHEON NADH-quinone oxidoreductase subunit G OS=Shewanella oneidensis (strain MR-1) GN=nuoG PE=3 SV=1 39 636 4.0E-59
sp|Q87ZQ4|NUOG_PSESM NADH-quinone oxidoreductase subunit G OS=Pseudomonas syringae pv. tomato (strain DC3000) GN=nuoG PE=3 SV=1 39 614 8.0E-57
sp|P0A1Y4|NUOG_SALTY NADH-quinone oxidoreductase subunit G OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=nuoG PE=3 SV=2 39 432 1.0E-56
sp|P0A1Y5|NUOG_SALTI NADH-quinone oxidoreductase subunit G OS=Salmonella typhi GN=nuoG PE=3 SV=2 39 432 1.0E-56
sp|Q7UC56|NUOG_SHIFL NADH-quinone oxidoreductase subunit G OS=Shigella flexneri GN=nuoG PE=3 SV=3 39 432 2.0E-56
sp|P33602|NUOG_ECOLI NADH-quinone oxidoreductase subunit G OS=Escherichia coli (strain K12) GN=nuoG PE=1 SV=4 39 432 2.0E-56
sp|Q8FFJ9|NUOG_ECOL6 NADH-quinone oxidoreductase subunit G OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=nuoG PE=3 SV=3 39 432 2.0E-56
sp|Q8XCX2|NUOG_ECO57 NADH-quinone oxidoreductase subunit G OS=Escherichia coli O157:H7 GN=nuoG PE=3 SV=3 39 432 2.0E-56
sp|Q89AU1|NUOG_BUCBP NADH-quinone oxidoreductase subunit G OS=Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp) GN=nuoG PE=3 SV=1 40 432 6.0E-55
sp|D7AF63|SFRA_GEOSK NADPH-Fe(3+) oxidoreductase subunit alpha OS=Geobacter sulfurreducens (strain DL-1 / KN400) GN=sfrA PE=3 SV=1 38 432 8.0E-53
sp|Q74FU6|SFRA_GEOSL NADPH-Fe(3+) oxidoreductase subunit alpha OS=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) GN=sfrA PE=1 SV=1 38 432 8.0E-53
sp|Q8ZDL2|NUOG_YERPE NADH-quinone oxidoreductase subunit G OS=Yersinia pestis GN=nuoG PE=3 SV=1 39 614 3.0E-52
sp|P57257|NUOG_BUCAI NADH-quinone oxidoreductase subunit G OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) GN=nuoG PE=3 SV=1 40 415 2.0E-51
sp|Q88FH2|NUOG_PSEPK NADH-quinone oxidoreductase subunit G OS=Pseudomonas putida (strain KT2440) GN=nuoG PE=3 SV=1 39 432 3.0E-51
sp|Q9I0J6|NUOG_PSEAE NADH-quinone oxidoreductase subunit G OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=nuoG PE=3 SV=1 39 640 2.0E-50
sp|Q8K9Y2|NUOG_BUCAP NADH-quinone oxidoreductase subunit G OS=Buchnera aphidicola subsp. Schizaphis graminum (strain Sg) GN=nuoG PE=3 SV=1 40 424 3.0E-50
sp|Q7VRV7|NUOG_BLOFL NADH-quinone oxidoreductase subunit G OS=Blochmannia floridanus GN=nuoG PE=3 SV=1 38 432 2.0E-47
sp|Q46508|HNDD_DESFR NADP-reducing hydrogenase subunit HndC OS=Desulfovibrio fructosivorans GN=hndD PE=1 SV=1 38 247 1.0E-27
sp|Q49ZN0|FDHL_STAS1 Putative formate dehydrogenase SSP0601 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP0601 PE=3 SV=1 38 431 2.0E-23
sp|Q795Y4|FDHL_BACSU Putative formate dehydrogenase YrhE OS=Bacillus subtilis (strain 168) GN=yrhE PE=3 SV=1 38 432 6.0E-21
sp|O34720|YJGC_BACSU Probable oxidoreductase YjgC OS=Bacillus subtilis (strain 168) GN=yjgC PE=3 SV=1 39 432 1.0E-20
sp|Q5HDP9|FDHL_STAAC Putative formate dehydrogenase SACOL2301 OS=Staphylococcus aureus (strain COL) GN=SACOL2301 PE=3 SV=1 38 432 5.0E-20
sp|Q2FEI5|FDHL_STAA3 Putative formate dehydrogenase SAUSA300_2258 OS=Staphylococcus aureus (strain USA300) GN=SAUSA300_2258 PE=3 SV=1 38 432 5.0E-20
sp|Q2FVV9|FDHL_STAA8 Putative formate dehydrogenase SAOUHSC_02582 OS=Staphylococcus aureus (strain NCTC 8325) GN=SAOUHSC_02582 PE=3 SV=1 38 432 5.0E-20
sp|Q6GEC4|FDHL_STAAR Putative formate dehydrogenase SAR2393 OS=Staphylococcus aureus (strain MRSA252) GN=SAR2393 PE=3 SV=1 38 482 6.0E-20
sp|Q931G2|FDHL_STAAM Putative formate dehydrogenase SAV2309 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV2309 PE=3 SV=1 38 432 9.0E-20
sp|Q7A057|FDHL_STAAW Putative formate dehydrogenase MW2229 OS=Staphylococcus aureus (strain MW2) GN=MW2229 PE=3 SV=1 38 432 1.0E-19
sp|Q99RW4|FDHL_STAAN Putative formate dehydrogenase SA2102 OS=Staphylococcus aureus (strain N315) GN=SA2102 PE=1 SV=1 38 432 1.0E-19
sp|Q6G711|FDHL_STAAS Putative formate dehydrogenase SAS2201 OS=Staphylococcus aureus (strain MSSA476) GN=SAS2201 PE=3 SV=1 38 432 1.0E-19
sp|Q2YYT1|FDHL_STAAB Putative formate dehydrogenase SAB2186c OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=SAB2186c PE=3 SV=1 38 482 2.0E-19
sp|Q4L8G8|FDHL_STAHJ Putative formate dehydrogenase SH0748 OS=Staphylococcus haemolyticus (strain JCSC1435) GN=SH0748 PE=3 SV=1 38 432 1.0E-18
sp|P22318|HOXU_CUPNH NAD-reducing hydrogenase HoxS subunit gamma OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=hoxU PE=1 SV=2 38 258 3.0E-18
sp|Q60314|Y006_METJA Uncharacterized oxidoreductase MJ0006 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0006 PE=3 SV=1 264 653 7.0E-17
sp|P61159|FDHA_METJA Formate dehydrogenase subunit alpha OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=fdhA PE=3 SV=2 555 661 1.0E-12
sp|P86203|NDUS1_MESAU NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial (Fragments) OS=Mesocricetus auratus GN=NDUFS1 PE=1 SV=1 531 654 3.0E-09
sp|Q49ZN0|FDHL_STAS1 Putative formate dehydrogenase SSP0601 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP0601 PE=3 SV=1 574 670 7.0E-08
sp|Q6G711|FDHL_STAAS Putative formate dehydrogenase SAS2201 OS=Staphylococcus aureus (strain MSSA476) GN=SAS2201 PE=3 SV=1 575 735 2.0E-07
sp|Q7A057|FDHL_STAAW Putative formate dehydrogenase MW2229 OS=Staphylococcus aureus (strain MW2) GN=MW2229 PE=3 SV=1 575 735 2.0E-07
sp|Q99RW4|FDHL_STAAN Putative formate dehydrogenase SA2102 OS=Staphylococcus aureus (strain N315) GN=SA2102 PE=1 SV=1 575 735 2.0E-07
sp|Q931G2|FDHL_STAAM Putative formate dehydrogenase SAV2309 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV2309 PE=3 SV=1 575 735 2.0E-07
sp|Q2YYT1|FDHL_STAAB Putative formate dehydrogenase SAB2186c OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=SAB2186c PE=3 SV=1 575 661 2.0E-07
sp|Q2FEI5|FDHL_STAA3 Putative formate dehydrogenase SAUSA300_2258 OS=Staphylococcus aureus (strain USA300) GN=SAUSA300_2258 PE=3 SV=1 575 735 2.0E-07
sp|Q5HDP9|FDHL_STAAC Putative formate dehydrogenase SACOL2301 OS=Staphylococcus aureus (strain COL) GN=SACOL2301 PE=3 SV=1 575 735 2.0E-07
sp|Q2FVV9|FDHL_STAA8 Putative formate dehydrogenase SAOUHSC_02582 OS=Staphylococcus aureus (strain NCTC 8325) GN=SAOUHSC_02582 PE=3 SV=1 575 735 2.0E-07
sp|Q4L8G8|FDHL_STAHJ Putative formate dehydrogenase SH0748 OS=Staphylococcus haemolyticus (strain JCSC1435) GN=SH0748 PE=3 SV=1 575 728 1.0E-06
sp|Q6GEC4|FDHL_STAAR Putative formate dehydrogenase SAR2393 OS=Staphylococcus aureus (strain MRSA252) GN=SAR2393 PE=3 SV=1 575 661 2.0E-06
sp|P61159|FDHA_METJA Formate dehydrogenase subunit alpha OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=fdhA PE=3 SV=2 252 432 8.0E-06
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GO

GO Term Description Terminal node
GO:0051536 iron-sulfur cluster binding Yes
GO:0016651 oxidoreductase activity, acting on NAD(P)H Yes
GO:0016491 oxidoreductase activity Yes
GO:0003674 molecular_function No
GO:0005488 binding No
GO:0003824 catalytic activity No
GO:0051540 metal cluster binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
Casing Casing mycelium 205.37 97.12 313.62
Initials Initials knots 114.48 66.21 162.76
Pileal_Stipeal_center Stage I stipe center 278.12 143.24 413.00
Pileal_Stipeal_shell Stage I stipe shell 337.87 164.82 510.93
DIF_stipe_center Stage II stipe center 295.97 151.11 440.83
DIF_stipe_shell Stage II stipe shell 280.71 145.36 416.06
DIF_stipe_skin Stage II stipe skin 247.86 131.11 364.60
DIF_cap_skin Stage II cap skin 388.67 185.90 591.44
DIF_cap_tissue Stage II cap tissue 401.64 192.22 611.06
DIF_gill_tissue Stage II gill tissue 356.40 174.94 537.85
YFB_stipe_center Young fruiting body stipe center 244.64 128.48 360.81
YFB_stipe_shell Young fruiting body stipe shell 238.43 126.76 350.10
YFB_stipe_skin Young fruiting body stipe skin 240.74 125.52 355.96
YFB_cap_skin Young fruiting body cap skin 365.56 179.14 551.97
YFB_cap_tissue Young fruiting body cap tissue 351.99 173.65 530.33
YFB_gill_tissue Young fruiting body gill tissue 309.36 154.54 464.19
YFB_veil Young fruiting body veil 333.18 165.40 500.96

Differential expression

Label1 Label2 Q-value Significant difference
Casing DIF_gill_tissue 0.142080 no
Casing YFB_stipe_center 0.739963 no
Casing YFB_stipe_shell 0.779535 no
Casing YFB_stipe_skin 0.769798 no
Casing YFB_cap_skin 0.116571 no
Casing YFB_cap_tissue 0.150164 no
Casing YFB_gill_tissue 0.300200 no
Casing YFB_veil 0.214592 no
Casing Initials 0.080179 no
Casing Pileal_Stipeal_center 0.483060 no
Casing Pileal_Stipeal_shell 0.195682 no
Casing DIF_stipe_center 0.385946 no
Casing DIF_stipe_shell 0.464981 no
Casing DIF_stipe_skin 0.708441 no
Casing DIF_cap_skin 0.080883 no
Casing DIF_cap_tissue 0.065276 no
DIF_gill_tissue YFB_stipe_center 0.336689 no
DIF_gill_tissue YFB_stipe_shell 0.278273 no
DIF_gill_tissue YFB_stipe_skin 0.310882 no
DIF_gill_tissue YFB_cap_skin 0.970544 no
DIF_gill_tissue YFB_cap_tissue 0.985489 no
DIF_gill_tissue YFB_gill_tissue 0.795283 no
DIF_gill_tissue YFB_veil 0.920036 no
YFB_stipe_center YFB_stipe_shell 0.968262 no
YFB_stipe_center YFB_stipe_skin 0.979431 no
YFB_stipe_center YFB_cap_skin 0.297484 no
YFB_stipe_center YFB_cap_tissue 0.357201 no
YFB_stipe_center YFB_gill_tissue 0.597669 no
YFB_stipe_center YFB_veil 0.468959 no
YFB_stipe_shell YFB_stipe_skin 0.986745 no
YFB_stipe_shell YFB_cap_skin 0.243427 no
YFB_stipe_shell YFB_cap_tissue 0.298330 no
YFB_stipe_shell YFB_gill_tissue 0.528398 no
YFB_stipe_shell YFB_veil 0.396117 no
YFB_stipe_skin YFB_cap_skin 0.274150 no
YFB_stipe_skin YFB_cap_tissue 0.332804 no
YFB_stipe_skin YFB_gill_tissue 0.560537 no
YFB_stipe_skin YFB_veil 0.434185 no
YFB_cap_skin YFB_cap_tissue 0.956475 no
YFB_cap_skin YFB_gill_tissue 0.749406 no
YFB_cap_skin YFB_veil 0.883221 no
YFB_cap_tissue YFB_gill_tissue 0.819421 no
YFB_cap_tissue YFB_veil 0.935804 no
YFB_gill_tissue YFB_veil 0.907865 no
Initials DIF_gill_tissue 0.000613 yes
Initials YFB_stipe_center 0.011659 yes
Initials YFB_stipe_shell 0.009123 yes
Initials YFB_stipe_skin 0.012577 yes
Initials YFB_cap_skin 0.000613 yes
Initials YFB_cap_tissue 0.000613 yes
Initials YFB_gill_tissue 0.000613 yes
Initials YFB_veil 0.001140 yes
Initials Pileal_Stipeal_center 0.002084 yes
Initials Pileal_Stipeal_shell 0.000613 yes
Initials DIF_stipe_center 0.000613 yes
Initials DIF_stipe_shell 0.001140 yes
Initials DIF_stipe_skin 0.005302 yes
Initials DIF_cap_skin 0.000613 yes
Initials DIF_cap_tissue 0.000613 yes
Pileal_Stipeal_center DIF_gill_tissue 0.578925 no
Pileal_Stipeal_center YFB_stipe_center 0.808270 no
Pileal_Stipeal_center YFB_stipe_shell 0.752898 no
Pileal_Stipeal_center YFB_stipe_skin 0.777716 no
Pileal_Stipeal_center YFB_cap_skin 0.527881 no
Pileal_Stipeal_center YFB_cap_tissue 0.608287 no
Pileal_Stipeal_center YFB_gill_tissue 0.848035 no
Pileal_Stipeal_center YFB_veil 0.719861 no
Pileal_Stipeal_center Pileal_Stipeal_shell 0.688299 no
Pileal_Stipeal_center DIF_stipe_center 0.919861 no
Pileal_Stipeal_center DIF_stipe_shell 0.988066 no
Pileal_Stipeal_center DIF_stipe_skin 0.824820 no
Pileal_Stipeal_center DIF_cap_skin 0.417465 no
Pileal_Stipeal_center DIF_cap_tissue 0.357040 no
Pileal_Stipeal_shell DIF_gill_tissue 0.935542 no
Pileal_Stipeal_shell YFB_stipe_center 0.434787 no
Pileal_Stipeal_shell YFB_stipe_shell 0.370189 no
Pileal_Stipeal_shell YFB_stipe_skin 0.407453 no
Pileal_Stipeal_shell YFB_cap_skin 0.901155 no
Pileal_Stipeal_shell YFB_cap_tissue 0.952285 no
Pileal_Stipeal_shell YFB_gill_tissue 0.884771 no
Pileal_Stipeal_shell YFB_veil 0.983392 no
Pileal_Stipeal_shell DIF_stipe_center 0.813681 no
Pileal_Stipeal_shell DIF_stipe_shell 0.709760 no
Pileal_Stipeal_shell DIF_stipe_skin 0.451577 no
Pileal_Stipeal_shell DIF_cap_skin 0.807950 no
Pileal_Stipeal_shell DIF_cap_tissue 0.753266 no
DIF_stipe_center DIF_gill_tissue 0.718491 no
DIF_stipe_center YFB_stipe_center 0.697691 no
DIF_stipe_center YFB_stipe_shell 0.636566 no
DIF_stipe_center YFB_stipe_skin 0.667350 no
DIF_stipe_center YFB_cap_skin 0.671809 no
DIF_stipe_center YFB_cap_tissue 0.744926 no
DIF_stipe_center YFB_gill_tissue 0.946397 no
DIF_stipe_center YFB_veil 0.839133 no
DIF_stipe_center DIF_stipe_shell 0.932040 no
DIF_stipe_center DIF_stipe_skin 0.718021 no
DIF_stipe_center DIF_cap_skin 0.556534 no
DIF_stipe_center DIF_cap_tissue 0.493720 no
DIF_stipe_shell DIF_gill_tissue 0.597981 no
DIF_stipe_shell YFB_stipe_center 0.790175 no
DIF_stipe_shell YFB_stipe_shell 0.732089 no
DIF_stipe_shell YFB_stipe_skin 0.759155 no
DIF_stipe_shell YFB_cap_skin 0.546815 no
DIF_stipe_shell YFB_cap_tissue 0.626833 no
DIF_stipe_shell YFB_gill_tissue 0.864650 no
DIF_stipe_shell YFB_veil 0.734539 no
DIF_stipe_shell DIF_stipe_skin 0.808781 no
DIF_stipe_shell DIF_cap_skin 0.437303 no
DIF_stipe_shell DIF_cap_tissue 0.374079 no
DIF_stipe_skin DIF_gill_tissue 0.335873 no
DIF_stipe_skin YFB_stipe_center 0.983711 no
DIF_stipe_skin YFB_stipe_shell 0.950110 no
DIF_stipe_skin YFB_stipe_skin 0.963050 no
DIF_stipe_skin YFB_cap_skin 0.298330 no
DIF_stipe_skin YFB_cap_tissue 0.362394 no
DIF_stipe_skin YFB_gill_tissue 0.609648 no
DIF_stipe_skin YFB_veil 0.473382 no
DIF_stipe_skin DIF_cap_skin 0.223600 no
DIF_stipe_skin DIF_cap_tissue 0.181080 no
DIF_cap_skin DIF_gill_tissue 0.891726 no
DIF_cap_skin YFB_stipe_center 0.218427 no
DIF_cap_skin YFB_stipe_shell 0.170621 no
DIF_cap_skin YFB_stipe_skin 0.197111 no
DIF_cap_skin YFB_cap_skin 0.926950 no
DIF_cap_skin YFB_cap_tissue 0.875444 no
DIF_cap_skin YFB_gill_tissue 0.630328 no
DIF_cap_skin YFB_veil 0.785080 no
DIF_cap_skin DIF_cap_tissue 0.963537 no
DIF_cap_tissue DIF_gill_tissue 0.843740 no
DIF_cap_tissue YFB_stipe_center 0.181328 no
DIF_cap_tissue YFB_stipe_shell 0.143480 no
DIF_cap_tissue YFB_stipe_skin 0.164242 no
DIF_cap_tissue YFB_cap_skin 0.882669 no
DIF_cap_tissue YFB_cap_tissue 0.825780 no
DIF_cap_tissue YFB_gill_tissue 0.566324 no
DIF_cap_tissue YFB_veil 0.726547 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|114240
MLRIVSTISRPTSTGIFGKVATSGRRSLASSSSRNADITLTVDGKEVTVPQGSALIQACEAAGAAIPRFCYHDRL
AIAGNCRMCLVEVERSPKPVASCAMPAMPGSKVFTNTPLVHQAREGVMEFLLVNHPLDCPICDQGGECDLQDQAM
RYGSDRNRFHEITGKRAVENKDFGPLVKTSMNRCIQCTRCVRFANEVAGVEDLGTTGRGNDMQIGMYVEKTMKSE
LSGNVIDLCPVGALTSKPYAFQARPWELKSTESIDVTDAIGSNIRVDSRGVQVMRVQPKTNDDVNEEWISDKTRY
AYDGLRAQRLTTPLVKKGDRFVAATWEEALTAVTEGLAASGATGNQIQAVAGHLADTESLVALKDLANRLNSDNL
TLDQPGGHLPPVHGVDVRSNYLFNATIPGVEEADAILLIGTNPRHEAAVLNSRIRKSWLHSSLEIGWVGEHADTT
YGYEFLGSDAKALEAFVSGKVAESAFSKKWAEAKKPLVIVGSALSEHSDATAVYKALAKLVEKEKARLVTPEWNG
FSVLQRVASRAAAYEIGFTPSRVASQTKPKFIYLLNADEIDPKSIPSDAFVVYQGHHGDLGAQIADVCLPGSAYT
EKSTTWVNTEGRAQLGRAAVGPPGAAREDWKIVRALSEVMGVPLPYNDTMELRDRMWEISPTIVRYDVTEKTTPE
IALAGMKDVSQRTMGAKIGGAAFKRPIENFYQTDPISRASVTMAQCTREFVKGEALSSKPGQVEQAAYA*
Coding >AgabiH97|114240
ATGCTGCGTATTGTGTCTACAATATCGCGGCCCACGTCGACGGGAATTTTCGGAAAGGTTGCAACCTCTGGTCGT
CGTTCACTCGCGTCATCATCATCGAGGAATGCGGATATCACATTGACGGTTGACGGAAAGGAAGTGACAGTTCCC
CAAGGTTCTGCCTTAATTCAAGCTTGTGAAGCCGCTGGAGCTGCGATACCAAGATTTTGCTACCATGATAGGCTA
GCAATTGCAGGAAACTGTCGTATGTGCTTGGTTGAAGTTGAGAGATCGCCAAAACCTGTAGCTTCATGTGCTATG
CCCGCTATGCCCGGTTCCAAAGTTTTTACCAACACGCCTCTCGTACATCAAGCACGAGAGGGAGTGATGGAATTC
CTCCTTGTCAATCACCCTCTCGACTGTCCCATCTGTGACCAAGGTGGTGAATGCGATCTTCAAGACCAGGCCATG
CGCTACGGTTCAGACCGCAACCGTTTTCACGAAATTACTGGCAAACGCGCCGTCGAAAACAAGGACTTTGGCCCT
CTTGTCAAGACCTCAATGAATCGTTGTATTCAATGCACACGTTGCGTCCGCTTTGCCAATGAAGTTGCTGGCGTT
GAGGATCTGGGCACAACTGGTCGTGGAAATGACATGCAGATAGGAATGTATGTGGAGAAGACCATGAAATCCGAA
CTTTCCGGAAACGTTATCGACCTCTGTCCTGTTGGAGCCCTTACAAGTAAACCCTATGCTTTCCAAGCCCGTCCC
TGGGAGCTCAAGAGCACAGAGAGCATCGATGTTACGGACGCTATTGGCTCAAATATCCGCGTCGATTCTCGCGGT
GTTCAGGTTATGCGTGTACAGCCAAAAACCAATGATGATGTCAATGAGGAGTGGATTAGCGACAAGACTCGTTAC
GCTTACGACGGTCTTAGAGCGCAGCGGTTAACAACGCCTCTAGTTAAGAAAGGCGACCGATTTGTTGCCGCTACC
TGGGAGGAGGCCTTGACCGCTGTCACTGAGGGTCTTGCTGCGTCTGGTGCAACTGGCAACCAGATCCAAGCCGTT
GCTGGCCATCTTGCCGACACTGAATCCCTCGTTGCTCTCAAAGACCTTGCCAACCGCCTTAACTCAGATAATCTC
ACTTTAGACCAACCCGGCGGACACCTTCCTCCCGTACATGGTGTTGATGTTCGTTCCAACTACCTCTTCAACGCA
ACCATACCTGGTGTCGAAGAAGCTGATGCCATTCTCCTCATTGGAACTAACCCACGACATGAAGCCGCCGTCCTA
AATTCCCGCATTCGCAAAAGTTGGCTACATTCTTCCCTCGAAATTGGCTGGGTTGGTGAACACGCCGATACGACT
TACGGTTACGAGTTCCTTGGCAGTGATGCCAAAGCACTAGAAGCCTTCGTCTCTGGAAAGGTCGCTGAGAGTGCT
TTCTCAAAGAAGTGGGCGGAAGCGAAGAAACCTTTGGTGATCGTTGGTAGTGCCCTCTCAGAGCATTCTGATGCG
ACTGCAGTGTATAAGGCCCTCGCAAAGCTTGTGGAGAAAGAGAAGGCTCGCCTTGTCACGCCTGAATGGAATGGA
TTCAGCGTCCTACAACGTGTGGCTTCTCGTGCTGCTGCCTATGAAATTGGATTCACACCATCTCGCGTCGCGTCT
CAAACAAAACCCAAATTTATTTACCTCCTCAATGCCGACGAGATCGACCCGAAATCGATTCCTTCGGACGCGTTT
GTCGTATATCAAGGACACCATGGTGACCTTGGTGCTCAAATAGCAGACGTCTGCTTACCGGGATCAGCGTACACT
GAGAAATCAACGACATGGGTGAACACTGAAGGTCGTGCCCAACTGGGGCGAGCAGCTGTCGGTCCGCCTGGCGCT
GCACGCGAAGATTGGAAAATTGTTCGTGCCCTTTCGGAGGTGATGGGTGTTCCTCTTCCGTATAATGATACAATG
GAGCTGAGGGATAGAATGTGGGAGATTTCACCGACGATTGTGAGGTATGATGTGACAGAGAAAACAACACCCGAG
ATAGCGTTGGCGGGTATGAAAGATGTGTCGCAGAGGACAATGGGGGCGAAGATTGGAGGTGCCGCATTTAAGAGG
CCAATTGAAAACTTCTATCAAACAGATCCAATTTCAAGAGCATCTGTAACAATGGCGCAATGCACTCGTGAGTTC
GTGAAGGGCGAAGCTTTAAGCAGCAAGCCGGGTCAAGTTGAGCAGGCTGCGTATGCATAG
Transcript >AgabiH97|114240
ATGCTGCGTATTGTGTCTACAATATCGCGGCCCACGTCGACGGGAATTTTCGGAAAGGTTGCAACCTCTGGTCGT
CGTTCACTCGCGTCATCATCATCGAGGAATGCGGATATCACATTGACGGTTGACGGAAAGGAAGTGACAGTTCCC
CAAGGTTCTGCCTTAATTCAAGCTTGTGAAGCCGCTGGAGCTGCGATACCAAGATTTTGCTACCATGATAGGCTA
GCAATTGCAGGAAACTGTCGTATGTGCTTGGTTGAAGTTGAGAGATCGCCAAAACCTGTAGCTTCATGTGCTATG
CCCGCTATGCCCGGTTCCAAAGTTTTTACCAACACGCCTCTCGTACATCAAGCACGAGAGGGAGTGATGGAATTC
CTCCTTGTCAATCACCCTCTCGACTGTCCCATCTGTGACCAAGGTGGTGAATGCGATCTTCAAGACCAGGCCATG
CGCTACGGTTCAGACCGCAACCGTTTTCACGAAATTACTGGCAAACGCGCCGTCGAAAACAAGGACTTTGGCCCT
CTTGTCAAGACCTCAATGAATCGTTGTATTCAATGCACACGTTGCGTCCGCTTTGCCAATGAAGTTGCTGGCGTT
GAGGATCTGGGCACAACTGGTCGTGGAAATGACATGCAGATAGGAATGTATGTGGAGAAGACCATGAAATCCGAA
CTTTCCGGAAACGTTATCGACCTCTGTCCTGTTGGAGCCCTTACAAGTAAACCCTATGCTTTCCAAGCCCGTCCC
TGGGAGCTCAAGAGCACAGAGAGCATCGATGTTACGGACGCTATTGGCTCAAATATCCGCGTCGATTCTCGCGGT
GTTCAGGTTATGCGTGTACAGCCAAAAACCAATGATGATGTCAATGAGGAGTGGATTAGCGACAAGACTCGTTAC
GCTTACGACGGTCTTAGAGCGCAGCGGTTAACAACGCCTCTAGTTAAGAAAGGCGACCGATTTGTTGCCGCTACC
TGGGAGGAGGCCTTGACCGCTGTCACTGAGGGTCTTGCTGCGTCTGGTGCAACTGGCAACCAGATCCAAGCCGTT
GCTGGCCATCTTGCCGACACTGAATCCCTCGTTGCTCTCAAAGACCTTGCCAACCGCCTTAACTCAGATAATCTC
ACTTTAGACCAACCCGGCGGACACCTTCCTCCCGTACATGGTGTTGATGTTCGTTCCAACTACCTCTTCAACGCA
ACCATACCTGGTGTCGAAGAAGCTGATGCCATTCTCCTCATTGGAACTAACCCACGACATGAAGCCGCCGTCCTA
AATTCCCGCATTCGCAAAAGTTGGCTACATTCTTCCCTCGAAATTGGCTGGGTTGGTGAACACGCCGATACGACT
TACGGTTACGAGTTCCTTGGCAGTGATGCCAAAGCACTAGAAGCCTTCGTCTCTGGAAAGGTCGCTGAGAGTGCT
TTCTCAAAGAAGTGGGCGGAAGCGAAGAAACCTTTGGTGATCGTTGGTAGTGCCCTCTCAGAGCATTCTGATGCG
ACTGCAGTGTATAAGGCCCTCGCAAAGCTTGTGGAGAAAGAGAAGGCTCGCCTTGTCACGCCTGAATGGAATGGA
TTCAGCGTCCTACAACGTGTGGCTTCTCGTGCTGCTGCCTATGAAATTGGATTCACACCATCTCGCGTCGCGTCT
CAAACAAAACCCAAATTTATTTACCTCCTCAATGCCGACGAGATCGACCCGAAATCGATTCCTTCGGACGCGTTT
GTCGTATATCAAGGACACCATGGTGACCTTGGTGCTCAAATAGCAGACGTCTGCTTACCGGGATCAGCGTACACT
GAGAAATCAACGACATGGGTGAACACTGAAGGTCGTGCCCAACTGGGGCGAGCAGCTGTCGGTCCGCCTGGCGCT
GCACGCGAAGATTGGAAAATTGTTCGTGCCCTTTCGGAGGTGATGGGTGTTCCTCTTCCGTATAATGATACAATG
GAGCTGAGGGATAGAATGTGGGAGATTTCACCGACGATTGTGAGGTATGATGTGACAGAGAAAACAACACCCGAG
ATAGCGTTGGCGGGTATGAAAGATGTGTCGCAGAGGACAATGGGGGCGAAGATTGGAGGTGCCGCATTTAAGAGG
CCAATTGAAAACTTCTATCAAACAGATCCAATTTCAAGAGCATCTGTAACAATGGCGCAATGCACTCGTGAGTTC
GTGAAGGGCGAAGCTTTAAGCAGCAAGCCGGGTCAAGTTGAGCAGGCTGCGTATGCATAG
Gene >AgabiH97|114240
ATGCTGCGTATTGTGTCTACAATATCGCGGCCCACGTCGACGGGAATTTTCGGAAAGGTTGCAACCTCTGGTGGG
TGTGTACCCGGCCTCCTTAATTTTCATGTTTTGAATGCGTACAACAACAGGTCGTCGTTCACTCGCGTCATCATC
ATCGAGGAATGCGGATATCACATTGACGGTTGACGGAAAGGAAGTGACAGTTCCCCAAGGTACTTAAACTATGCT
GTTAAAACACGTACCTCTCTAATAATGATGTTTCTAAGGTTCTGCCTTAATTCAAGCTTGTGAAGCCGCTGGAGC
TGCGATACCAAGGTCTGCATTTCTCCCCTCTTTTTCGAACCCGACCGTGATTGAATCTGGATGTAGATTTTGCTA
CCATGATAGGTCTACCCTTGTCACCTTCCAGCCCTTCTAGCTCTAACGCGAAAATAGGCTAGCAATTGCAGGAAA
CTGTCGTATGTGCTTGGTTGAAGTTGAGAGATCGCCAAAACCTGTAGCTTCATGGTGCGTGCCTTGTCGTCCCTT
TCAGCGCCTATGTTAATGTTGTTCCCAGTGCTATGCCCGCTATGCCCGGTTCCAAAGTTTTTACCAACACGCCTC
TCGTACATCAAGCACGGTAGGTATTCTTGTCTGTGTTTCGTTATTTTCCAAGGTTTCTTATCTCAATATAGAGAG
GGAGTGATGGAATTCCTCCTTGTCAATCACCCTCTCGACTGTCCCATCTGTGACCAAGGTGGTGAATGCGATCTT
CAAGACCAGGCCATGCGCTACGGTTCAGACCGCAACCGTTTTCACGAAATTACTGGCAAACGCGCCGTCGAAAAC
AAGGACTTTGGCCCTCTTGTCAAGACCTCAATGAATCGTTGTATTCAATGCACACGTTGCGTCCGCTTTGCCAAT
GAAGTTGCTGGCGTTGAGGATCTGGGCACAACTGGTCGTGGAAATGACATGCAGATAGGAATGTATGTGGAGAAG
ACCATGAAATCCGAACTTTCCGGAAACGTTATCGACCTCTGTCCTGTTGGAGCCCTTACAAGTAAACCCTATGCT
TTCCAAGCCCGTCCCTGGGAGCTCAAGAGCACAGAGAGCATCGATGTTACGGACGCTATTGGCTCAAATATCCGC
GTCGATTCTCGCGGTGTTCAGGTTATGCGTGTACAGCCAAAAACCAATGATGATGTCAATGAGGAGTGGATTAGC
GACAAGACTCGTTACGCTTACGACGGTCTTAGAGCGCAGCGGTTAACAACGCCTCTAGTTAAGAAAGGCGACCGA
TTTGTTGCCGCTACCTGGGAGGAGGCCTTGACCGCTGTCACTGAGGGTCTTGCTGCGTCTGGTGCAACTGGCAAC
CAGATCCAAGCCGTTGCTGGCCATCTTGCCGACACTGAATCCCTCGTTGCTCTCAAAGACCTTGCCAACCGCCTT
AACTCAGATAATCTCACTTTAGACCAACCCGGCGGACACCTTCCTCCCGTACATGGTGTTGATGTTCGTTCCAAC
TACCTCTTCAACGCAACCATACCTGGTGTCGAAGAAGCTGATGCCATTCTCCTCATTGGAACTAACCCACGACAT
GAAGCCGCCGTCCTAAATTCCCGCATTCGCAAAAGTTGGCTACATTCTTCCCTCGAAATTGGCTGGGTTGGTGAA
CACGCCGATACGACTTACGGTTACGAGTTCCTTGGCAGTGATGCCAAAGCACTAGAAGCCTTCGTCTCTGGAAAG
GTCGCTGAGAGTGCTTTCTCAAAGAAGTGGGCGGAAGCGAAGAAACCTTTGGTGATCGTTGGTAGTGCCCTCTCA
GAGCATTCTGATGCGACTGCAGTGTATAAGGCCCTCGCAAAGCTTGTGGAGAAAGAGAAGGCTCGCCTTGTCACG
CCTGAATGGAATGGATTCAGCGTCCTACAACGTGTGGCTTCTCGTGCTGCTGCCTATGAAATTGGATTCACACCA
TCTCGCGTCGCGTCTCAAACAAAACCCAAATTTATTTACCTCCTCAATGCCGACGAGATCGACCCGAAATCGATT
CCTTCGGACGCGTTTGTCGTATATCAAGGACACCATGGTGACCTTGGTGCTCAAATAGCAGACGTCTGCTTACCG
GGATCAGCGTACACTGAGAAATCAACGACATGGGTGAACACTGAAGGTCGTGCCCAACTGGGGCGAGCAGCTGTC
GGTCCGCCTGGCGCTGCACGCGAAGATTGGAAAATTGTTCGTGCCCTTTCGGAGGTGATGGGTGTTCCTCTTCCG
TATAATGATACAATGGAGCTGAGGGATAGAATGTGGGAGATTTCACCGACGATTGTGAGGTATGATGTGACAGAG
AAAACAACACCCGAGATAGCGTTGGCGGGTATGAAAGATGTGTCGCAGAGGACAATGGGGGCGAAGATTGGAGGT
GCCGCATTTAAGAGGCCAATTGAAAACTTCTATCAAACAGATCCAATTTCAAGAGCGTAAGTTTCTCCGTCCGCC
TTTTTCGCCAGAGGTGCTTATAATTTTTTATAGATCTGTAACAATGGCGCAATGCACTCGTGAGTTCGTGAAGGG
CGAAGCTTTAAGCAGCAAGCCGGGTCAAGTTGAGCAGGCTGCGTATGCATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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