Fungal Genomics

at Utrecht University

General Properties

Protein ID	AgabiH97\|113900
Gene name
Location	scaffold_9:77410..78796
Strand	-
Gene length (bp)	1386
Transcript length (bp)	1131
Coding sequence length (bp)	1131
Protein length (aa)	377

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01408	GFO_IDH_MocA	Oxidoreductase family, NAD-binding Rossmann fold	6.2E-14	7	127
PF02894	GFO_IDH_MocA_C	Oxidoreductase family, C-terminal alpha/beta domain	4.1E-14	158	362

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q04869\|YM94_YEAST	Uncharacterized protein YMR315W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YMR315W PE=1 SV=1	6	371	3.0E-25
sp\|O13991\|YEG9_SCHPO	Uncharacterized oxidoreductase C26H5.09c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC26H5.09c PE=2 SV=3	8	220	1.0E-13
sp\|O42896\|YBQ3_SCHPO	Uncharacterized oxidoreductase C115.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC115.03 PE=3 SV=1	8	172	8.0E-11
sp\|Q07982\|GFO_ZYMMO	Glucose--fructose oxidoreductase OS=Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4) GN=gfo PE=1 SV=2	6	237	9.0E-10
sp\|P40332\|IOLX_BACSU	scyllo-inositol 2-dehydrogenase (NAD(+)) OS=Bacillus subtilis (strain 168) GN=iolX PE=1 SV=2	25	297	3.0E-06

GO

GO Term	Description	Terminal node
GO:0000166	nucleotide binding	Yes
GO:0003674	molecular_function	No
GO:0005488	binding	No
GO:0097159	organic cyclic compound binding	No
GO:1901363	heterocyclic compound binding	No
GO:0036094	small molecule binding	No
GO:1901265	nucleoside phosphate binding	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 20	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>AgabiH97\|113900 MSGISGVAILGAGIFAKEAHLPALAALGASAPPLKAVYSRSEKSAKDLAQTAATILKLSSPPSVYFDNDSSSNLD VLLARSDISSVIVILPITTQPAIVLKALAAGKHVISEKPVAADVQSGLKLIADYNSNFKSKNLIWRVAENFEAEP GYQAAAAAIRAGKIGQVHSFKAEKIDYIDTETKWYKTPWRTIPDYQGGFLLDGGVHTIAALRVMLPHPLTHVSGF ASLNKAYLAPHDTIHAIVQAGPGVSGVADLIFASPTKSRPAGSEFAILGTNGWLSVNHVSKPGVSGSVIRVIIHS IVRSKDGTEVEEEEIIDEPGIGVQAELASFFAAISGKDDGKGLGDPLAALGDVAFIQAALNSGGNLVDLTQLLRG D*
Coding	>AgabiH97\|113900 ATGTCAGGAATTTCTGGTGTTGCGATTCTTGGTGCTGGTATTTTTGCAAAGGAAGCCCATCTACCTGCGCTTGCT GCTCTCGGGGCCTCTGCGCCACCTCTCAAGGCTGTTTATTCACGATCTGAGAAAAGTGCCAAGGATCTCGCTCAA ACAGCTGCCACTATCCTGAAACTGTCATCCCCACCATCTGTCTATTTCGATAATGACAGCTCGAGCAATCTCGAC GTTCTCCTCGCGCGAAGCGACATCTCATCAGTTATCGTAATCCTACCCATCACAACTCAGCCCGCGATCGTTCTC AAAGCCTTAGCCGCCGGTAAACATGTCATCAGCGAAAAGCCCGTAGCTGCAGATGTTCAATCTGGGTTGAAACTG ATCGCCGATTACAATTCTAATTTCAAGTCGAAAAATCTGATCTGGCGTGTTGCGGAGAATTTCGAAGCTGAGCCT GGATATCAAGCGGCTGCTGCAGCTATCCGAGCTGGAAAAATTGGTCAAGTGCATTCCTTCAAGGCGGAAAAAATA GACTATATCGATACCGAAACGAAGTGGTACAAGACTCCCTGGCGCACTATCCCTGATTATCAAGGCGGTTTCTTG CTCGACGGCGGAGTTCATACCATTGCCGCACTTCGCGTCATGCTTCCCCACCCTCTGACGCATGTTTCCGGATTC GCTTCCCTGAACAAGGCATATCTCGCTCCCCATGATACCATTCATGCCATTGTTCAAGCAGGTCCAGGTGTTTCT GGGGTCGCCGATTTGATATTTGCTTCTCCTACGAAATCCCGCCCTGCAGGCAGTGAATTTGCGATTTTGGGTACC AATGGTTGGTTGTCCGTCAACCACGTCTCTAAGCCAGGAGTTTCCGGGTCTGTTATCCGCGTCATCATTCACTCG ATTGTAAGGTCAAAGGATGGTACGGAAGTCGAGGAGGAAGAGATTATAGATGAGCCTGGGATTGGTGTTCAGGCA GAGTTGGCCAGCTTCTTTGCTGCTATTAGTGGTAAAGACGATGGTAAAGGTTTGGGAGACCCTCTCGCCGCGCTT GGTGACGTTGCTTTTATACAAGCTGCGTTGAATAGCGGGGGCAATCTCGTCGACCTGACCCAGCTGCTGCGGGGT GACTAA
Transcript	>AgabiH97\|113900 ATGTCAGGAATTTCTGGTGTTGCGATTCTTGGTGCTGGTATTTTTGCAAAGGAAGCCCATCTACCTGCGCTTGCT GCTCTCGGGGCCTCTGCGCCACCTCTCAAGGCTGTTTATTCACGATCTGAGAAAAGTGCCAAGGATCTCGCTCAA ACAGCTGCCACTATCCTGAAACTGTCATCCCCACCATCTGTCTATTTCGATAATGACAGCTCGAGCAATCTCGAC GTTCTCCTCGCGCGAAGCGACATCTCATCAGTTATCGTAATCCTACCCATCACAACTCAGCCCGCGATCGTTCTC AAAGCCTTAGCCGCCGGTAAACATGTCATCAGCGAAAAGCCCGTAGCTGCAGATGTTCAATCTGGGTTGAAACTG ATCGCCGATTACAATTCTAATTTCAAGTCGAAAAATCTGATCTGGCGTGTTGCGGAGAATTTCGAAGCTGAGCCT GGATATCAAGCGGCTGCTGCAGCTATCCGAGCTGGAAAAATTGGTCAAGTGCATTCCTTCAAGGCGGAAAAAATA GACTATATCGATACCGAAACGAAGTGGTACAAGACTCCCTGGCGCACTATCCCTGATTATCAAGGCGGTTTCTTG CTCGACGGCGGAGTTCATACCATTGCCGCACTTCGCGTCATGCTTCCCCACCCTCTGACGCATGTTTCCGGATTC GCTTCCCTGAACAAGGCATATCTCGCTCCCCATGATACCATTCATGCCATTGTTCAAGCAGGTCCAGGTGTTTCT GGGGTCGCCGATTTGATATTTGCTTCTCCTACGAAATCCCGCCCTGCAGGCAGTGAATTTGCGATTTTGGGTACC AATGGTTGGTTGTCCGTCAACCACGTCTCTAAGCCAGGAGTTTCCGGGTCTGTTATCCGCGTCATCATTCACTCG ATTGTAAGGTCAAAGGATGGTACGGAAGTCGAGGAGGAAGAGATTATAGATGAGCCTGGGATTGGTGTTCAGGCA GAGTTGGCCAGCTTCTTTGCTGCTATTAGTGGTAAAGACGATGGTAAAGGTTTGGGAGACCCTCTCGCCGCGCTT GGTGACGTTGCTTTTATACAAGCTGCGTTGAATAGCGGGGGCAATCTCGTCGACCTGACCCAGCTGCTGCGGGGT GACTAA
Gene	>AgabiH97\|113900 ATGTCAGGAATTTCTGGTGTTGCGATTCTTGGTGCTGGTATTTTTGCAAAGGAAGGCAAATATTGATATGCATTA TTCTTTGTGTGTTGATGGTGTCTGATTATTAACCACCCCTGTTCATTTTTCAACAGCCCATCTACCTGCGCTTGC TGCTCTCGGGGCCTCTGCGCCACCTCTCAAGGCTGTTTATTCACGATCTGAGAAAAGTGCCAAGGATCTCGCTCA AACAGCTGCCACTATCCTGAAACTGTCATCCCCACCATCTGTCTATTTCGATAATGACAGCTCGAGCAATCTCGA CGTTCTCCTCGCGCGAAGCGACATCTCATCAGTTATCGTAATCCTACCCATCACAACTCAGCCCGCGATCGTTCT CAAAGCCTTAGCCGCCGGTAAACATGTCATCAGCGAAAAGCCCGTAGCTGCAGATGTTCAATCTGGGTTGAAACT GATCGCCGATTACAATTCTAATTTCAAGTCGAAAAATCTGATCTGGCGTGTTGCGGAGAATTTCGAAGCTGAGCC TGGATATCAAGCGGCTGCTGCAGCTATCCGAGCTGGAAAAATTGGTCAAGTGCATTCCTTCAAGGCGGAAAAAAT AGACTATATCGATACCGAAACGAAGTGGTACAAGACTCCCTGGCGCACTATCCCTGATGTGAGTACTGCCATGGA GCCACAGTTGTGCAATCATTGATCCACTCACTTATTTGTTGTAGTATCAAGGCGGTTTCTTGGTATGTTTGAAAC CTATCTTTACCATCATATGACATCGGTCTTATTGATCCCTTAACGTCTCTAGCTCGACGGCGGAGTTGTAAGCTT CTAATTCATGTTCTGAGCTTCCTGTTCCCTGATATCGTCCGATAGCATACCATTGCCGCACTTCGCGTCATGCTT CCCCACCCTCTGACGCATGTTTCCGGATTCGCTTCCCTGAACAAGGCATATCTCGCTCCCCATGATACCATTCAT GCCATTGTTCAAGCAGGTCCAGGTGTTTCTGGGGTCGCCGATTTGATATTTGCTTCTCCTACGAAATCCCGCCCT GCAGGCAGTGAATTTGCGATTTTGGGTACCAATGGTTGGTTGTCCGTCAACCACGTCTCTAAGCCAGGAGTTTCC GGGTCTGTTATCCGCGTCATCATTCACTCGATTGTAAGGTCAAAGGATGGTACGGAAGTCGAGGAGGAAGAGATT ATAGATGAGCCTGGGATTGGTGTTCAGGCAGAGTTGGCCAGCTTCTTTGCTGCTATTAGTGGTAAAGACGATGGT AAAGGTTTGGGAGACCCTCTCGCCGCGCTTGGTGACGTTGCTTTTATACAAGCTGCGTTGAATAGCGGGGGCAAT CTCGTCGACCTGACCCAGCTGCTGCGGGGTGACTAA

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