Fungal Genomics

at Utrecht University

General Properties

Protein ID	AgabiH97\|113770
Gene name
Location	scaffold_9:33850..35743
Strand	-
Gene length (bp)	1893
Transcript length (bp)	1383
Coding sequence length (bp)	1383
Protein length (aa)	461

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF12051	DUF3533	Protein of unknown function (DUF3533)	6.6E-89	74	438

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P46950\|SNG1_YEAST	Nitrosoguanidine resistance protein SNG1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SNG1 PE=1 SV=1	22	454	1.0E-31
sp\|P47090\|YJY5_YEAST	Uncharacterized endoplasmic reticulum membrane protein YJR015W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YJR015W PE=1 SV=1	31	456	5.0E-20

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 48	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	69	91	22
2	261	283	22
3	304	326	22
4	341	363	22
5	370	392	22
6	427	449	22

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>AgabiH97\|113770 MNGQVPIIPDHGTTRSSLSSSPTTERSYIPSKGEQVREEAKTLQPAPQSRFFAKTEALSQARRIYFKTFIPGFIL IILVVFAVFPIYWGSLWKVPAHPVDGWIVDYDGGQVGEFFMQNIPPQSNNRIVWSRYPGEQLPSIEQLENDITEE RIWAVIAVNSGASNRLNETLQTPSGSYNGKTALTVYAAEARNEFAYRNLISPTVIEFLDQLSQRFAIQFTQQVAS STSAVSLANVALTSPQLLTLPVYFTMVNLRPFDEPVASAPSFVGLIYLLILSFFITMIGEGARNASGLSRILSWP AYARLRIITAVIAYFFVSLMYSLLNVAFQIDFTRHFGRSGFMAFWMLNWAGMMAVGLALESMITLLTTRFIPFFM ITWILSNVSVCIAPIQVLPGIYRYGYAAPFYNLSRGFRTIAFSTKNQLGLNFGILIAWVVISCITLPLFQWLMWR RNQKAVQRVS*
Coding	>AgabiH97\|113770 ATGAACGGCCAGGTTCCCATAATACCCGACCATGGTACAACTCGCTCGTCTCTGTCAAGCAGTCCAACAACAGAA CGGTCGTATATACCCTCGAAAGGAGAGCAAGTGCGGGAAGAGGCGAAGACCTTACAACCTGCGCCACAAAGCAGA TTTTTCGCAAAGACAGAGGCGTTGTCGCAAGCCCGGAGGATATACTTCAAAACATTTATACCAGGTTTTATCCTT ATCATCCTGGTTGTATTCGCTGTATTTCCGATTTACTGGGGGTCGCTATGGAAAGTCCCTGCTCATCCTGTTGAC GGTTGGATCGTGGATTATGATGGCGGACAAGTAGGGGAGTTCTTCATGCAAAATATTCCACCGCAGTCGAATAAT AGGATTGTGTGGTCGAGATACCCTGGAGAACAACTTCCTAGTATCGAGCAACTGGAGAACGACATTACCGAAGAA CGGATTTGGGCCGTTATTGCTGTGAACTCTGGGGCCTCCAACCGTCTCAACGAGACACTTCAGACTCCGAGTGGA TCCTATAATGGTAAAACAGCTCTAACAGTTTACGCTGCTGAAGCTCGCAACGAATTCGCCTACCGGAATTTGATT TCCCCGACGGTCATTGAATTCCTGGACCAACTGTCTCAACGGTTCGCTATCCAATTTACCCAACAAGTTGCATCG TCGACGAGCGCAGTTTCCCTAGCCAACGTCGCTCTGACCTCGCCACAATTGTTAACCTTACCTGTATACTTCACG ATGGTAAATTTGCGTCCCTTCGATGAACCAGTTGCTTCAGCACCGTCATTCGTGGGTTTAATATATCTGCTTATC CTCTCATTCTTCATTACTATGATTGGAGAAGGCGCACGCAATGCTTCCGGATTGAGTAGAATCTTATCTTGGCCA GCATACGCCCGCCTTCGCATCATTACAGCTGTGATTGCGTATTTTTTTGTCTCCTTAATGTATTCCCTCCTGAAC GTCGCTTTCCAAATTGATTTTACGCGTCATTTTGGGAGAAGCGGGTTTATGGCGTTCTGGATGCTCAACTGGGCC GGGATGATGGCTGTTGGCCTCGCCCTTGAGTCTATGATAACTCTTCTAACAACGCGGTTCATCCCATTCTTCATG ATAACTTGGATTCTGAGCAATGTATCCGTATGTATAGCTCCCATTCAGGTGCTTCCCGGGATATATCGTTACGGA TACGCTGCGCCGTTCTACAACCTTTCACGCGGCTTCCGAACCATTGCTTTCAGCACGAAAAACCAACTTGGCCTA AATTTTGGCATTCTCATCGCGTGGGTTGTGATATCCTGTATCACACTTCCATTGTTCCAATGGCTTATGTGGAGG AGAAATCAAAAAGCTGTACAAAGGGTATCATGA
Transcript	>AgabiH97\|113770 ATGAACGGCCAGGTTCCCATAATACCCGACCATGGTACAACTCGCTCGTCTCTGTCAAGCAGTCCAACAACAGAA CGGTCGTATATACCCTCGAAAGGAGAGCAAGTGCGGGAAGAGGCGAAGACCTTACAACCTGCGCCACAAAGCAGA TTTTTCGCAAAGACAGAGGCGTTGTCGCAAGCCCGGAGGATATACTTCAAAACATTTATACCAGGTTTTATCCTT ATCATCCTGGTTGTATTCGCTGTATTTCCGATTTACTGGGGGTCGCTATGGAAAGTCCCTGCTCATCCTGTTGAC GGTTGGATCGTGGATTATGATGGCGGACAAGTAGGGGAGTTCTTCATGCAAAATATTCCACCGCAGTCGAATAAT AGGATTGTGTGGTCGAGATACCCTGGAGAACAACTTCCTAGTATCGAGCAACTGGAGAACGACATTACCGAAGAA CGGATTTGGGCCGTTATTGCTGTGAACTCTGGGGCCTCCAACCGTCTCAACGAGACACTTCAGACTCCGAGTGGA TCCTATAATGGTAAAACAGCTCTAACAGTTTACGCTGCTGAAGCTCGCAACGAATTCGCCTACCGGAATTTGATT TCCCCGACGGTCATTGAATTCCTGGACCAACTGTCTCAACGGTTCGCTATCCAATTTACCCAACAAGTTGCATCG TCGACGAGCGCAGTTTCCCTAGCCAACGTCGCTCTGACCTCGCCACAATTGTTAACCTTACCTGTATACTTCACG ATGGTAAATTTGCGTCCCTTCGATGAACCAGTTGCTTCAGCACCGTCATTCGTGGGTTTAATATATCTGCTTATC CTCTCATTCTTCATTACTATGATTGGAGAAGGCGCACGCAATGCTTCCGGATTGAGTAGAATCTTATCTTGGCCA GCATACGCCCGCCTTCGCATCATTACAGCTGTGATTGCGTATTTTTTTGTCTCCTTAATGTATTCCCTCCTGAAC GTCGCTTTCCAAATTGATTTTACGCGTCATTTTGGGAGAAGCGGGTTTATGGCGTTCTGGATGCTCAACTGGGCC GGGATGATGGCTGTTGGCCTCGCCCTTGAGTCTATGATAACTCTTCTAACAACGCGGTTCATCCCATTCTTCATG ATAACTTGGATTCTGAGCAATGTATCCGTATGTATAGCTCCCATTCAGGTGCTTCCCGGGATATATCGTTACGGA TACGCTGCGCCGTTCTACAACCTTTCACGCGGCTTCCGAACCATTGCTTTCAGCACGAAAAACCAACTTGGCCTA AATTTTGGCATTCTCATCGCGTGGGTTGTGATATCCTGTATCACACTTCCATTGTTCCAATGGCTTATGTGGAGG AGAAATCAAAAAGCTGTACAAAGGGTATCATGA
Gene	>AgabiH97\|113770 ATGAACGGCCAGGTTCCCATAATACCCGACCATGGTACAACTCGCTCGTCTCTGTCAAGCAGTCCAACAACAGAA CGGTCGTATATACCCTCGAAAGGAGAGCAAGTGCGGGAAGAGGCGAAGACCTTACAACCTGCGCCACAAAGCAGA TTTTTCGCAAAGACAGAGGCGTTGTCGCAAGCCCGGAGGATATACTTCAAAACATTTATACCAGGTTTTATCCTT ATCATCCTGGTTGTATTCGCTGTATTTCCGATTTACTGGGGGTCGCTATGGAAAGTCCCTGCTCATCCTGTTGAC GGTTGGATCGTGGTATGTCCTTTGATATTGTCTCAGACATTATATAAACGATTTTTGATTTTGTTCAGGATTATG ATGGCGGACAAGTAGGGGAGTTCTTCATGCAAAATATTCCACCGCAGTCGAATAATAGGATTGTGTGGTCGAGAT ACCCTGGAGAACAACTTCCTAGTATCGAGCAACTGGAGAACGACATTACCGAAGAACGGATTTGGGCCGTTATTG CTGGTATGTCTTCTCATCAGGTTCACGAACAAATCAATTCAAGCTGCGAAGTGAACTCTGGGGCCTCCAACCGTC TCAACGAGACACTTCAGACTCCGAGTGGATCCTATAATGGTAAAACAGCTCTAACAGTTTACGCTGCTGAAGCTC GCAACGAATTCGCCTAGTGAGTACTTTTAATTTGATTATGTAGAACGTGCATTGAGCAGCTGGTGTAGCCGGAAT TTGATTTCCCCGACGGTGAGACTCAGTCTCATGGGCTAGTATTGTATTACTCACCGGTGCAGGTCATTGAATTCC TGGACCAACTGTCTCAACGGTTCGCTATCCAATTTACCCAACAAGTTGCATCGTCGACGAGCGCAGTTTCCCTAG CCAACGTCGCTCTGACCTCGCCACAATTGTTAACCTTACCTGTATACTTCACGATGGTAAATTTGCGTCCCTTCG ATGAACCAGTGTAAGTGCCAACCTTTACATCTGGCGATGTCTGACAATCGGGTAGTGCTTCAGCACCGTCATTCG TGGGTTTAATATATCTGCTTATCCTCTCATTCTTCATTACTGTGAGTGTCACTTGTACACTTAAGTGGCCCAGCT AAATCCTCTTTTAAGATGATTGGAGAAGGCGCACGCAATGCTTCCGGATTGAGTAGAATCTTATCTTGGCCAGCA TACGCCCGCCTTCGCATCATTACAGCTGTGATTGCGTATTTTTTTGTCTCCGTGAGTCGTGTATAACGCATACCA CGGACTATTTAACATAGCTTGATTTCAGTTAATGTATTCCCTCCTGAACGTCGCTTTCCAAATTGATTTTACGCG TCATTTTGGGAGAAGCGGGTTTATGGCGTTCTGGATGCTCAACTGGGCCGGGATGATGGCTGTGTACGTTCATTC TTTGTCTTCTCTTGCTTCGCTAATTAAACCATTTGCAATCAGTGGCCTCGCCCTTGAGTCTATGATAACTCTTCT AACAACGCGGTTCATCCCATTCTTCATGATAACTTGGATTCTGAGTAAGAAAAATTGTTGTCATTTAACAACAAT ACGTTGACAAGTTATGCAGGCAATGTATCCGTATGTATAGCTCCCATTCAGGTGCTTCCCGGGATATATCGTTAC GGATACGCTGCGCCGTTCTACAACCTTTCACGCGGCTTCCGAACCATTGCTTTCAGCACGAAAAACCAACGTTCG TACTAGATTTTGACTATCTCTCCACTAAAACTGTGCTGACCTACCCGTTTAGTTGGCCTAAATTTTGGCATTCTC ATCGCGTGGGTTGTGATATCCTGTATCACACTTCCATTGTTCCAATGGCTTATGTGGAGGAGAAATCAAAAAGCT GTACAAAGGGTATCATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail