Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|113770
Gene name
Locationscaffold_9:33850..35743
Strand-
Gene length (bp)1893
Transcript length (bp)1383
Coding sequence length (bp)1383
Protein length (aa) 461

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12051 DUF3533 Protein of unknown function (DUF3533) 6.6E-89 74 438

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P46950|SNG1_YEAST Nitrosoguanidine resistance protein SNG1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SNG1 PE=1 SV=1 22 454 1.0E-31
sp|P47090|YJY5_YEAST Uncharacterized endoplasmic reticulum membrane protein YJR015W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YJR015W PE=1 SV=1 31 456 5.0E-20

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 48 0.45

Transmembrane Domains

Domain # Start End Length
1 69 91 22
2 261 283 22
3 304 326 22
4 341 363 22
5 370 392 22
6 427 449 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|113770
MNGQVPIIPDHGTTRSSLSSSPTTERSYIPSKGEQVREEAKTLQPAPQSRFFAKTEALSQARRIYFKTFIPGFIL
IILVVFAVFPIYWGSLWKVPAHPVDGWIVDYDGGQVGEFFMQNIPPQSNNRIVWSRYPGEQLPSIEQLENDITEE
RIWAVIAVNSGASNRLNETLQTPSGSYNGKTALTVYAAEARNEFAYRNLISPTVIEFLDQLSQRFAIQFTQQVAS
STSAVSLANVALTSPQLLTLPVYFTMVNLRPFDEPVASAPSFVGLIYLLILSFFITMIGEGARNASGLSRILSWP
AYARLRIITAVIAYFFVSLMYSLLNVAFQIDFTRHFGRSGFMAFWMLNWAGMMAVGLALESMITLLTTRFIPFFM
ITWILSNVSVCIAPIQVLPGIYRYGYAAPFYNLSRGFRTIAFSTKNQLGLNFGILIAWVVISCITLPLFQWLMWR
RNQKAVQRVS*
Coding >AgabiH97|113770
ATGAACGGCCAGGTTCCCATAATACCCGACCATGGTACAACTCGCTCGTCTCTGTCAAGCAGTCCAACAACAGAA
CGGTCGTATATACCCTCGAAAGGAGAGCAAGTGCGGGAAGAGGCGAAGACCTTACAACCTGCGCCACAAAGCAGA
TTTTTCGCAAAGACAGAGGCGTTGTCGCAAGCCCGGAGGATATACTTCAAAACATTTATACCAGGTTTTATCCTT
ATCATCCTGGTTGTATTCGCTGTATTTCCGATTTACTGGGGGTCGCTATGGAAAGTCCCTGCTCATCCTGTTGAC
GGTTGGATCGTGGATTATGATGGCGGACAAGTAGGGGAGTTCTTCATGCAAAATATTCCACCGCAGTCGAATAAT
AGGATTGTGTGGTCGAGATACCCTGGAGAACAACTTCCTAGTATCGAGCAACTGGAGAACGACATTACCGAAGAA
CGGATTTGGGCCGTTATTGCTGTGAACTCTGGGGCCTCCAACCGTCTCAACGAGACACTTCAGACTCCGAGTGGA
TCCTATAATGGTAAAACAGCTCTAACAGTTTACGCTGCTGAAGCTCGCAACGAATTCGCCTACCGGAATTTGATT
TCCCCGACGGTCATTGAATTCCTGGACCAACTGTCTCAACGGTTCGCTATCCAATTTACCCAACAAGTTGCATCG
TCGACGAGCGCAGTTTCCCTAGCCAACGTCGCTCTGACCTCGCCACAATTGTTAACCTTACCTGTATACTTCACG
ATGGTAAATTTGCGTCCCTTCGATGAACCAGTTGCTTCAGCACCGTCATTCGTGGGTTTAATATATCTGCTTATC
CTCTCATTCTTCATTACTATGATTGGAGAAGGCGCACGCAATGCTTCCGGATTGAGTAGAATCTTATCTTGGCCA
GCATACGCCCGCCTTCGCATCATTACAGCTGTGATTGCGTATTTTTTTGTCTCCTTAATGTATTCCCTCCTGAAC
GTCGCTTTCCAAATTGATTTTACGCGTCATTTTGGGAGAAGCGGGTTTATGGCGTTCTGGATGCTCAACTGGGCC
GGGATGATGGCTGTTGGCCTCGCCCTTGAGTCTATGATAACTCTTCTAACAACGCGGTTCATCCCATTCTTCATG
ATAACTTGGATTCTGAGCAATGTATCCGTATGTATAGCTCCCATTCAGGTGCTTCCCGGGATATATCGTTACGGA
TACGCTGCGCCGTTCTACAACCTTTCACGCGGCTTCCGAACCATTGCTTTCAGCACGAAAAACCAACTTGGCCTA
AATTTTGGCATTCTCATCGCGTGGGTTGTGATATCCTGTATCACACTTCCATTGTTCCAATGGCTTATGTGGAGG
AGAAATCAAAAAGCTGTACAAAGGGTATCATGA
Transcript >AgabiH97|113770
ATGAACGGCCAGGTTCCCATAATACCCGACCATGGTACAACTCGCTCGTCTCTGTCAAGCAGTCCAACAACAGAA
CGGTCGTATATACCCTCGAAAGGAGAGCAAGTGCGGGAAGAGGCGAAGACCTTACAACCTGCGCCACAAAGCAGA
TTTTTCGCAAAGACAGAGGCGTTGTCGCAAGCCCGGAGGATATACTTCAAAACATTTATACCAGGTTTTATCCTT
ATCATCCTGGTTGTATTCGCTGTATTTCCGATTTACTGGGGGTCGCTATGGAAAGTCCCTGCTCATCCTGTTGAC
GGTTGGATCGTGGATTATGATGGCGGACAAGTAGGGGAGTTCTTCATGCAAAATATTCCACCGCAGTCGAATAAT
AGGATTGTGTGGTCGAGATACCCTGGAGAACAACTTCCTAGTATCGAGCAACTGGAGAACGACATTACCGAAGAA
CGGATTTGGGCCGTTATTGCTGTGAACTCTGGGGCCTCCAACCGTCTCAACGAGACACTTCAGACTCCGAGTGGA
TCCTATAATGGTAAAACAGCTCTAACAGTTTACGCTGCTGAAGCTCGCAACGAATTCGCCTACCGGAATTTGATT
TCCCCGACGGTCATTGAATTCCTGGACCAACTGTCTCAACGGTTCGCTATCCAATTTACCCAACAAGTTGCATCG
TCGACGAGCGCAGTTTCCCTAGCCAACGTCGCTCTGACCTCGCCACAATTGTTAACCTTACCTGTATACTTCACG
ATGGTAAATTTGCGTCCCTTCGATGAACCAGTTGCTTCAGCACCGTCATTCGTGGGTTTAATATATCTGCTTATC
CTCTCATTCTTCATTACTATGATTGGAGAAGGCGCACGCAATGCTTCCGGATTGAGTAGAATCTTATCTTGGCCA
GCATACGCCCGCCTTCGCATCATTACAGCTGTGATTGCGTATTTTTTTGTCTCCTTAATGTATTCCCTCCTGAAC
GTCGCTTTCCAAATTGATTTTACGCGTCATTTTGGGAGAAGCGGGTTTATGGCGTTCTGGATGCTCAACTGGGCC
GGGATGATGGCTGTTGGCCTCGCCCTTGAGTCTATGATAACTCTTCTAACAACGCGGTTCATCCCATTCTTCATG
ATAACTTGGATTCTGAGCAATGTATCCGTATGTATAGCTCCCATTCAGGTGCTTCCCGGGATATATCGTTACGGA
TACGCTGCGCCGTTCTACAACCTTTCACGCGGCTTCCGAACCATTGCTTTCAGCACGAAAAACCAACTTGGCCTA
AATTTTGGCATTCTCATCGCGTGGGTTGTGATATCCTGTATCACACTTCCATTGTTCCAATGGCTTATGTGGAGG
AGAAATCAAAAAGCTGTACAAAGGGTATCATGA
Gene >AgabiH97|113770
ATGAACGGCCAGGTTCCCATAATACCCGACCATGGTACAACTCGCTCGTCTCTGTCAAGCAGTCCAACAACAGAA
CGGTCGTATATACCCTCGAAAGGAGAGCAAGTGCGGGAAGAGGCGAAGACCTTACAACCTGCGCCACAAAGCAGA
TTTTTCGCAAAGACAGAGGCGTTGTCGCAAGCCCGGAGGATATACTTCAAAACATTTATACCAGGTTTTATCCTT
ATCATCCTGGTTGTATTCGCTGTATTTCCGATTTACTGGGGGTCGCTATGGAAAGTCCCTGCTCATCCTGTTGAC
GGTTGGATCGTGGTATGTCCTTTGATATTGTCTCAGACATTATATAAACGATTTTTGATTTTGTTCAGGATTATG
ATGGCGGACAAGTAGGGGAGTTCTTCATGCAAAATATTCCACCGCAGTCGAATAATAGGATTGTGTGGTCGAGAT
ACCCTGGAGAACAACTTCCTAGTATCGAGCAACTGGAGAACGACATTACCGAAGAACGGATTTGGGCCGTTATTG
CTGGTATGTCTTCTCATCAGGTTCACGAACAAATCAATTCAAGCTGCGAAGTGAACTCTGGGGCCTCCAACCGTC
TCAACGAGACACTTCAGACTCCGAGTGGATCCTATAATGGTAAAACAGCTCTAACAGTTTACGCTGCTGAAGCTC
GCAACGAATTCGCCTAGTGAGTACTTTTAATTTGATTATGTAGAACGTGCATTGAGCAGCTGGTGTAGCCGGAAT
TTGATTTCCCCGACGGTGAGACTCAGTCTCATGGGCTAGTATTGTATTACTCACCGGTGCAGGTCATTGAATTCC
TGGACCAACTGTCTCAACGGTTCGCTATCCAATTTACCCAACAAGTTGCATCGTCGACGAGCGCAGTTTCCCTAG
CCAACGTCGCTCTGACCTCGCCACAATTGTTAACCTTACCTGTATACTTCACGATGGTAAATTTGCGTCCCTTCG
ATGAACCAGTGTAAGTGCCAACCTTTACATCTGGCGATGTCTGACAATCGGGTAGTGCTTCAGCACCGTCATTCG
TGGGTTTAATATATCTGCTTATCCTCTCATTCTTCATTACTGTGAGTGTCACTTGTACACTTAAGTGGCCCAGCT
AAATCCTCTTTTAAGATGATTGGAGAAGGCGCACGCAATGCTTCCGGATTGAGTAGAATCTTATCTTGGCCAGCA
TACGCCCGCCTTCGCATCATTACAGCTGTGATTGCGTATTTTTTTGTCTCCGTGAGTCGTGTATAACGCATACCA
CGGACTATTTAACATAGCTTGATTTCAGTTAATGTATTCCCTCCTGAACGTCGCTTTCCAAATTGATTTTACGCG
TCATTTTGGGAGAAGCGGGTTTATGGCGTTCTGGATGCTCAACTGGGCCGGGATGATGGCTGTGTACGTTCATTC
TTTGTCTTCTCTTGCTTCGCTAATTAAACCATTTGCAATCAGTGGCCTCGCCCTTGAGTCTATGATAACTCTTCT
AACAACGCGGTTCATCCCATTCTTCATGATAACTTGGATTCTGAGTAAGAAAAATTGTTGTCATTTAACAACAAT
ACGTTGACAAGTTATGCAGGCAATGTATCCGTATGTATAGCTCCCATTCAGGTGCTTCCCGGGATATATCGTTAC
GGATACGCTGCGCCGTTCTACAACCTTTCACGCGGCTTCCGAACCATTGCTTTCAGCACGAAAAACCAACGTTCG
TACTAGATTTTGACTATCTCTCCACTAAAACTGTGCTGACCTACCCGTTTAGTTGGCCTAAATTTTGGCATTCTC
ATCGCGTGGGTTGTGATATCCTGTATCACACTTCCATTGTTCCAATGGCTTATGTGGAGGAGAAATCAAAAAGCT
GTACAAAGGGTATCATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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