Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|112950
Gene name
Locationscaffold_8:1796676..1797995
Strand+
Gene length (bp)1319
Transcript length (bp)888
Coding sequence length (bp)888
Protein length (aa) 296

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05153 MIOX Myo-inositol oxygenase 1.0E-122 49 295

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q54GH4|MIOX_DICDI Inositol oxygenase OS=Dictyostelium discoideum GN=miox PE=3 SV=1 33 295 1.0E-93
sp|Q5Z8T3|MIOX_ORYSJ Probable inositol oxygenase OS=Oryza sativa subsp. japonica GN=Os06g0561000 PE=2 SV=1 41 295 2.0E-92
sp|O82200|MIOX2_ARATH Inositol oxygenase 2 OS=Arabidopsis thaliana GN=MIOX2 PE=2 SV=2 41 295 3.0E-90
sp|Q9FJU4|MIOX5_ARATH Inositol oxygenase 5 OS=Arabidopsis thaliana GN=MIOX5 PE=2 SV=1 42 295 4.0E-89
sp|Q8L799|MIOX1_ARATH Inositol oxygenase 1 OS=Arabidopsis thaliana GN=MIOX1 PE=2 SV=1 41 295 3.0E-88
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Swissprot ID Swissprot Description Start End E-value
sp|Q54GH4|MIOX_DICDI Inositol oxygenase OS=Dictyostelium discoideum GN=miox PE=3 SV=1 33 295 1.0E-93
sp|Q5Z8T3|MIOX_ORYSJ Probable inositol oxygenase OS=Oryza sativa subsp. japonica GN=Os06g0561000 PE=2 SV=1 41 295 2.0E-92
sp|O82200|MIOX2_ARATH Inositol oxygenase 2 OS=Arabidopsis thaliana GN=MIOX2 PE=2 SV=2 41 295 3.0E-90
sp|Q9FJU4|MIOX5_ARATH Inositol oxygenase 5 OS=Arabidopsis thaliana GN=MIOX5 PE=2 SV=1 42 295 4.0E-89
sp|Q8L799|MIOX1_ARATH Inositol oxygenase 1 OS=Arabidopsis thaliana GN=MIOX1 PE=2 SV=1 41 295 3.0E-88
sp|Q8H1S0|MIOX4_ARATH Inositol oxygenase 4 OS=Arabidopsis thaliana GN=MIOX4 PE=2 SV=1 42 295 2.0E-87
sp|Q4V8T0|MIOX_DANRE Inositol oxygenase OS=Danio rerio GN=miox PE=2 SV=1 36 295 4.0E-81
sp|Q5REY9|MIOX_PONAB Inositol oxygenase OS=Pongo abelii GN=MIOX PE=2 SV=1 26 295 2.0E-74
sp|Q9QXN5|MIOX_MOUSE Inositol oxygenase OS=Mus musculus GN=Miox PE=1 SV=2 28 295 2.0E-74
sp|Q9UGB7|MIOX_HUMAN Inositol oxygenase OS=Homo sapiens GN=MIOX PE=1 SV=1 26 295 5.0E-74
sp|Q9QXN4|MIOX_RAT Inositol oxygenase OS=Rattus norvegicus GN=Miox PE=1 SV=2 41 295 4.0E-73
sp|A7MBE4|MIOX_BOVIN Inositol oxygenase OS=Bos taurus GN=MIOX PE=2 SV=1 28 295 4.0E-72
sp|Q8WN98|MIOX_PIG Inositol oxygenase OS=Sus scrofa GN=MIOX PE=1 SV=1 25 295 7.0E-71
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GO

GO Term Description Terminal node
GO:0019310 inositol catabolic process Yes
GO:0050113 inositol oxygenase activity Yes
GO:0005506 iron ion binding Yes
GO:0005737 cytoplasm Yes
GO:0071704 organic substance metabolic process No
GO:1901616 organic hydroxy compound catabolic process No
GO:0006020 inositol metabolic process No
GO:0008152 metabolic process No
GO:0046174 polyol catabolic process No
GO:0044281 small molecule metabolic process No
GO:0009056 catabolic process No
GO:0008150 biological_process No
GO:0006066 alcohol metabolic process No
GO:0043169 cation binding No
GO:0044248 cellular catabolic process No
GO:0046872 metal ion binding No
GO:0005575 cellular_component No
GO:0046164 alcohol catabolic process No
GO:0043167 ion binding No
GO:0005488 binding No
GO:0110165 cellular anatomical entity No
GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen No
GO:1901615 organic hydroxy compound metabolic process No
GO:0004497 monooxygenase activity No
GO:0019751 polyol metabolic process No
GO:0016491 oxidoreductase activity No
GO:0044237 cellular metabolic process No
GO:0003824 catalytic activity No
GO:0009987 cellular process No
GO:0044262 cellular carbohydrate metabolic process No
GO:0046914 transition metal ion binding No
GO:0044238 primary metabolic process No
GO:0016052 carbohydrate catabolic process No
GO:0003674 molecular_function No
GO:0005975 carbohydrate metabolic process No
GO:0044275 cellular carbohydrate catabolic process No
GO:0044282 small molecule catabolic process No
GO:1901575 organic substance catabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 16 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|112950
MQPATFAQLEQTSDAVDEVNQLKGRLWNSEAEFAVEKDIISFRQYDDACDHVRAFYQEQHEKQTLEFNVEIRKRF
AKLNHCEMGIWEAMELLNSVKDDSDPDTSVSQIEHLLQTAEAIRRDGKPEWMQVVGLVHDLGKLLTTFQPEGQWA
IVGDTFPVGCKFSDKIIYSEKFYSNPDSRNHKLMTDCGIYEPHCGLDNVLLSWGHDEYLYLVLKNQSTLPKEGLW
MIRYHSFYPWHREGAYQHLCNEADKDALAAVQAFNPYDLYSKSDDPVDPEKLKPYYIKLIAKFFPQKLRW*
Coding >AgabiH97|112950
ATGCAACCAGCAACATTCGCTCAGCTCGAACAAACGTCCGACGCCGTAGATGAAGTTAACCAATTAAAAGGACGT
CTGTGGAATTCTGAAGCAGAGTTCGCCGTGGAGAAGGATATCATATCGTTTAGGCAGTATGACGACGCCTGCGAT
CATGTTAGAGCATTTTATCAAGAACAGCATGAGAAACAAACGCTCGAATTCAACGTCGAAATCCGCAAACGCTTC
GCTAAACTCAACCATTGTGAGATGGGTATTTGGGAAGCGATGGAACTTCTCAATTCAGTGAAAGATGATTCAGAT
CCTGACACAAGCGTGTCCCAAATTGAACACCTCTTACAAACCGCGGAAGCCATACGCCGCGACGGAAAGCCCGAA
TGGATGCAAGTCGTGGGTCTGGTGCATGATCTTGGCAAGCTCCTCACCACCTTCCAACCGGAAGGCCAATGGGCC
ATCGTTGGAGACACATTCCCCGTTGGGTGCAAGTTTTCAGACAAGATAATCTACTCGGAGAAGTTTTATTCCAAT
CCAGATTCTCGAAACCATAAACTCATGACGGACTGTGGGATCTACGAGCCCCACTGTGGACTTGATAATGTTCTT
CTTTCATGGGGTCATGACGAATACCTGTACCTGGTACTAAAAAATCAATCCACGCTCCCAAAGGAGGGTCTTTGG
ATGATACGGTATCACTCGTTCTACCCATGGCATCGCGAGGGCGCTTATCAACATCTATGCAATGAAGCAGACAAG
GATGCACTTGCTGCGGTCCAAGCGTTTAACCCTTACGATTTATACAGCAAGAGCGACGATCCGGTGGATCCAGAG
AAGCTCAAGCCGTACTACATCAAACTTATTGCTAAATTTTTTCCCCAGAAGCTTAGGTGGTGA
Transcript >AgabiH97|112950
ATGCAACCAGCAACATTCGCTCAGCTCGAACAAACGTCCGACGCCGTAGATGAAGTTAACCAATTAAAAGGACGT
CTGTGGAATTCTGAAGCAGAGTTCGCCGTGGAGAAGGATATCATATCGTTTAGGCAGTATGACGACGCCTGCGAT
CATGTTAGAGCATTTTATCAAGAACAGCATGAGAAACAAACGCTCGAATTCAACGTCGAAATCCGCAAACGCTTC
GCTAAACTCAACCATTGTGAGATGGGTATTTGGGAAGCGATGGAACTTCTCAATTCAGTGAAAGATGATTCAGAT
CCTGACACAAGCGTGTCCCAAATTGAACACCTCTTACAAACCGCGGAAGCCATACGCCGCGACGGAAAGCCCGAA
TGGATGCAAGTCGTGGGTCTGGTGCATGATCTTGGCAAGCTCCTCACCACCTTCCAACCGGAAGGCCAATGGGCC
ATCGTTGGAGACACATTCCCCGTTGGGTGCAAGTTTTCAGACAAGATAATCTACTCGGAGAAGTTTTATTCCAAT
CCAGATTCTCGAAACCATAAACTCATGACGGACTGTGGGATCTACGAGCCCCACTGTGGACTTGATAATGTTCTT
CTTTCATGGGGTCATGACGAATACCTGTACCTGGTACTAAAAAATCAATCCACGCTCCCAAAGGAGGGTCTTTGG
ATGATACGGTATCACTCGTTCTACCCATGGCATCGCGAGGGCGCTTATCAACATCTATGCAATGAAGCAGACAAG
GATGCACTTGCTGCGGTCCAAGCGTTTAACCCTTACGATTTATACAGCAAGAGCGACGATCCGGTGGATCCAGAG
AAGCTCAAGCCGTACTACATCAAACTTATTGCTAAATTTTTTCCCCAGAAGCTTAGGTGGTGA
Gene >AgabiH97|112950
ATGCAACCAGCAACATTCGCTCAGCTCGAACAAACGTCCGACGCCGTAGATGAAGGTACTGCAATACACTAACTT
TAGGTGCTGATCTGACCGTTGTTGTTTGAAGTTAACCAATTAAAAGGACGTCTGTGGAATTCTGAAGCAGAGTTC
GCCGTGGAGAAGGATATCATATCGTTTAGGCAGTATGACGACGCCTGCGATCATGTTAGAGCATTTTATCAAGAA
CAGCATGGTTAGCAAATCGCTTCTTTACTACCAACGATCCTCAACATCCTCGTAGAGAAACAAACGCTCGAATTC
AACGTCGAAATCCGCAAACGCTTCGCTAAACTCAACCATTGTGAGATGGGTAAGTTCCTTCGTTCCCTTCAAGGC
ACAGCTCATTGATCGCTCACGCACAATTACAGGTATTTGGGAAGCGATGGAACTTCTCAATTCAGTGAAAGATGA
TTCAGATCCTGACGTGAGAAGTCCGTTTCGCCTGCTTGATTTAACAGTTGATGACCTGTCCGAGTAGACAAGCGT
GTCCCAAATTGAACACCTCTTACAAACCGCGGAAGCCATACGCCGCGACGGAAAGCCCGAATGGATGCAAGTCGT
GGGTCTGGTGCATGATCTTGGCAAGCTCCTCACCACCTTCCAACCGGAGTAAAGTTCCTTCTTTGTGGAATATTT
TTCTTGTCTGAAGCCGGTTTTTTTAGAGGCCAATGGGCCATCGTTGGAGTACGTATGACGAAATTTATTGCGTCA
GGCTGATTGAAGAACCTTTGTCTTATAGGACACATTCCCCGTTGGGTGCAAGTTTTCAGACAAGATAATCTACTC
GGAGAAGTTTTATTCCAATCCAGATTCTCGAAACCATAAACTCATGACGGACTGTGGGATCTACGAGCCCCACTG
TGGACTTGATAATGTTCTTCTTTCATGGGGTCATGACGAAGTGAGTTCATATCCGTGGTGTCCGGTGTTCAATTT
TCTGACACATACTCATGTAGTACCTGTACCTGGTACTAAAAAATCAATCCACGCTCCCAAAGGAGGGTCTTTGGA
TGATACGGTATCACTCGTTCTACCCGTTTGTTCTTTTCAACCCCCATAATCTGGTATCCAATCCTGACGACTCCA
TTTCCAGATGGCATCGCGAGGGCGCTTATCAACATCTATGCAATGAAGCAGACAAGGATGCACTTGCTGCGGTCC
AAGCGTTTAACCCTTACGATTTATACAGCAAGAGCGACGATCCGGTGGATCCAGAGAAGCTCAAGCCGTACTACA
TCAAACTTATTGCTAAATTTTTTCCCCAGAAGCTTAGGTGGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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