Fungal Genomics

at Utrecht University

General Properties

Protein ID	AgabiH97\|112390
Gene name
Location	scaffold_8:1650030..1650843
Strand	+
Gene length (bp)	813
Transcript length (bp)	693
Coding sequence length (bp)	693
Protein length (aa)	231

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01083	Cutinase	Cutinase	1.1E-48	20	224

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|O59893\|AXE2_TALPU	Acetylxylan esterase 2 OS=Talaromyces purpurogenus GN=axe-2 PE=1 SV=1	7	225	2.0E-92
sp\|Q99034\|AXE1_HYPJE	Acetylxylan esterase OS=Hypocrea jecorina GN=axe1 PE=1 SV=1	13	225	2.0E-83

GO

GO Term	Description	Terminal node
GO:0016787	hydrolase activity	Yes
GO:0003824	catalytic activity	No
GO:0003674	molecular_function	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 20	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>AgabiH97\|112390 MSPIRFASLFLLGATLAAAQCPQVHIFGARETTVPPGYGTAGPVVNSIISAFPGATAEPINYPACGGQASCGGVS YASSVVQGVAAVARQVNSFNQQCPNAVLVLVGYSQGGQLFDDAYCGGGDSNEGISDPSIPISTAAQAKIAAAIFM GDPRHIPGLSYNVGTCQASGFAPRPNGFQCPHASNIQSYCDAADPFCCNGNDQNTHQGYAVEYGSAALNFVRGKV NAMLG*
Coding	>AgabiH97\|112390 ATGTCACCCATCCGCTTTGCATCTCTCTTCCTTCTAGGAGCCACTCTCGCTGCTGCCCAGTGTCCACAAGTTCAC ATCTTTGGCGCGCGTGAGACTACTGTTCCTCCCGGCTATGGCACAGCAGGTCCGGTCGTCAACTCCATCATTTCT GCATTCCCAGGAGCCACCGCTGAACCTATTAATTATCCTGCTTGCGGTGGTCAAGCTTCGTGTGGTGGTGTCAGT TATGCCTCCTCCGTTGTTCAAGGTGTAGCTGCTGTAGCTCGCCAAGTGAATTCTTTCAACCAGCAATGCCCCAAT GCAGTCTTGGTCTTGGTTGGTTACTCACAGGGCGGTCAACTTTTTGATGATGCCTATTGCGGTGGAGGTGACAGT AATGAAGGCATCAGCGATCCTTCGATTCCCATTTCTACAGCTGCTCAGGCCAAAATTGCTGCAGCCATCTTCATG GGCGACCCGCGTCACATCCCTGGTTTGTCCTACAATGTCGGAACCTGCCAAGCGAGTGGCTTCGCTCCTCGACCC AATGGCTTCCAGTGCCCACACGCGAGTAACATTCAATCTTACTGCGACGCTGCAGACCCATTCTGCTGCAACGGA AACGACCAGAACACTCACCAGGGCTACGCTGTTGAGTATGGCTCTGCCGCCCTCAACTTTGTCCGGGGCAAAGTC AATGCCATGCTCGGTTAA
Transcript	>AgabiH97\|112390 ATGTCACCCATCCGCTTTGCATCTCTCTTCCTTCTAGGAGCCACTCTCGCTGCTGCCCAGTGTCCACAAGTTCAC ATCTTTGGCGCGCGTGAGACTACTGTTCCTCCCGGCTATGGCACAGCAGGTCCGGTCGTCAACTCCATCATTTCT GCATTCCCAGGAGCCACCGCTGAACCTATTAATTATCCTGCTTGCGGTGGTCAAGCTTCGTGTGGTGGTGTCAGT TATGCCTCCTCCGTTGTTCAAGGTGTAGCTGCTGTAGCTCGCCAAGTGAATTCTTTCAACCAGCAATGCCCCAAT GCAGTCTTGGTCTTGGTTGGTTACTCACAGGGCGGTCAACTTTTTGATGATGCCTATTGCGGTGGAGGTGACAGT AATGAAGGCATCAGCGATCCTTCGATTCCCATTTCTACAGCTGCTCAGGCCAAAATTGCTGCAGCCATCTTCATG GGCGACCCGCGTCACATCCCTGGTTTGTCCTACAATGTCGGAACCTGCCAAGCGAGTGGCTTCGCTCCTCGACCC AATGGCTTCCAGTGCCCACACGCGAGTAACATTCAATCTTACTGCGACGCTGCAGACCCATTCTGCTGCAACGGA AACGACCAGAACACTCACCAGGGCTACGCTGTTGAGTATGGCTCTGCCGCCCTCAACTTTGTCCGGGGCAAAGTC AATGCCATGCTCGGTTAA
Gene	>AgabiH97\|112390 ATGTCACCCATCCGCTTTGCATCTCTCTTCCTTCTAGGAGCCACTCTCGCTGCTGCCCAGTGTCCACAAGTTCAC ATCTTTGGCGCGCGTGAGACTACTGTTCCTCCCGGCTATGGCACAGCAGGTCCGGTCGTCAACTCCATCATTTCT GCATTCCCAGGAGCCACCGCTGAACCTATTAATTATCCTGCTTGCGGTGGTCAAGCTTCGTGTGGTGGTGTCAGT TATGCCTCCTCCGTTGTTCAAGGTGTAGCTGCTGTAGCTCGCCAAGTGAATTCTTTCAACCAGCAATGCCCCAAT GCAGTCTTGGTCTTGGTTGGTTACTCACAGGTGCTTTGGAGGTCTTTATTTATGCCTTTCGTATATGCTTGCTGA CATGAGCGCGACAGGGCGGTCAACTTTTTGATGATGCCTATTGCGGTGGAGGTGACAGTAATGAAGGCATCAGCG ATCCTTCGATTCCCATTTCTACAGCTGCTCAGGCCAAAATTGCTGCAGCCATCTTCATGGGCGACCCGCGTCACA TCCCTGGTTTGTCCTACAATGTCGGAACCTGCCAAGCGAGTGGCGTTAGTACCCATACCTCAGCCTCCTCATCTC ATCATGTTCTGACCTTAATTTATCTTCCAGTTCGCTCCTCGACCCAATGGCTTCCAGTGCCCACACGCGAGTAAC ATTCAATCTTACTGCGACGCTGCAGACCCATTCTGCTGCAACGGAAACGACCAGAACACTCACCAGGGCTACGCT GTTGAGTATGGCTCTGCCGCCCTCAACTTTGTCCGGGGCAAAGTCAATGCCATGCTCGGTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail