Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|112210
Gene name
Locationscaffold_8:1591823..1592929
Strand-
Gene length (bp)1106
Transcript length (bp)1008
Coding sequence length (bp)1008
Protein length (aa) 336

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF20415 DUF6699 Family of unknown function (DUF6699) 1.6E-10 185 318

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|112210
MPIISLHRWLGLWTTAVSAIHSPRCFPDQSRMAIIAYNSLISRPSDKSVLTHCASVNKAKIIIGDRFLVWCYNDV
TSPFSSMTPKHRHGTQPHVHPRNRNPFFLVPPSFANHTHYVLYIVPDKMRSAPHVSFLVDSASPRSSLSSDYASD
SSDDSLPLTAEPKIKLHPLLTRSPERIYNHFNYHIFWDICDEPRYAQYVETLDTHEHLRADDWNASATEPAVQSL
RIRYSMQENYELIVKAQTNTGVTIAEIFMALYDHFRRPGKGDESRGKNSLRMEIALDKRTANVDRSNRAPRTTGL
SKGDEMMKFTRFAGMDVEPGKKYTVRLTLKGRDSF*
Coding >AgabiH97|112210
ATGCCCATAATATCTCTGCACAGATGGTTGGGACTATGGACGACTGCGGTTTCTGCGATTCATTCGCCCCGTTGC
TTCCCCGATCAATCGAGAATGGCTATTATAGCCTACAATAGTCTTATCTCCCGCCCTAGTGACAAAAGTGTCCTG
ACACACTGTGCGAGCGTCAACAAAGCGAAAATAATTATCGGCGATCGCTTTCTCGTCTGGTGTTACAACGACGTC
ACGTCTCCTTTTTCAAGCATGACTCCGAAGCATAGGCATGGAACGCAACCACATGTCCATCCGAGGAATCGAAAT
CCGTTCTTCCTCGTTCCTCCCTCTTTTGCTAACCACACCCACTACGTTCTGTACATCGTCCCCGATAAGATGCGC
TCTGCCCCGCACGTGTCTTTTCTTGTCGACTCAGCTTCCCCTCGTTCCTCTTTGTCTTCGGACTATGCTTCTGAT
TCCTCTGACGATTCCCTACCTCTCACGGCGGAGCCTAAAATCAAGCTCCATCCGCTTCTGACACGGTCGCCGGAA
CGCATCTATAATCACTTCAACTATCATATTTTTTGGGACATTTGCGATGAACCGCGTTATGCCCAATATGTCGAG
ACTCTTGACACTCATGAACACCTCCGTGCGGATGACTGGAATGCGTCAGCTACCGAGCCGGCTGTCCAGTCTTTA
AGAATCAGATATTCGATGCAGGAGAATTATGAGTTGATCGTTAAAGCTCAGACAAATACCGGAGTTACGATTGCG
GAGATTTTCATGGCCCTCTACGACCACTTCCGCCGCCCTGGCAAAGGCGACGAGTCGAGAGGCAAGAACTCATTG
CGCATGGAGATTGCGCTCGACAAGAGGACTGCCAATGTCGATAGATCCAACAGAGCGCCGCGGACTACGGGATTG
TCGAAAGGGGATGAGATGATGAAATTCACGAGGTTCGCGGGGATGGATGTTGAGCCTGGCAAGAAATACACTGTC
AGACTTACGTTGAAGGGTCGGGATAGCTTTTAA
Transcript >AgabiH97|112210
ATGCCCATAATATCTCTGCACAGATGGTTGGGACTATGGACGACTGCGGTTTCTGCGATTCATTCGCCCCGTTGC
TTCCCCGATCAATCGAGAATGGCTATTATAGCCTACAATAGTCTTATCTCCCGCCCTAGTGACAAAAGTGTCCTG
ACACACTGTGCGAGCGTCAACAAAGCGAAAATAATTATCGGCGATCGCTTTCTCGTCTGGTGTTACAACGACGTC
ACGTCTCCTTTTTCAAGCATGACTCCGAAGCATAGGCATGGAACGCAACCACATGTCCATCCGAGGAATCGAAAT
CCGTTCTTCCTCGTTCCTCCCTCTTTTGCTAACCACACCCACTACGTTCTGTACATCGTCCCCGATAAGATGCGC
TCTGCCCCGCACGTGTCTTTTCTTGTCGACTCAGCTTCCCCTCGTTCCTCTTTGTCTTCGGACTATGCTTCTGAT
TCCTCTGACGATTCCCTACCTCTCACGGCGGAGCCTAAAATCAAGCTCCATCCGCTTCTGACACGGTCGCCGGAA
CGCATCTATAATCACTTCAACTATCATATTTTTTGGGACATTTGCGATGAACCGCGTTATGCCCAATATGTCGAG
ACTCTTGACACTCATGAACACCTCCGTGCGGATGACTGGAATGCGTCAGCTACCGAGCCGGCTGTCCAGTCTTTA
AGAATCAGATATTCGATGCAGGAGAATTATGAGTTGATCGTTAAAGCTCAGACAAATACCGGAGTTACGATTGCG
GAGATTTTCATGGCCCTCTACGACCACTTCCGCCGCCCTGGCAAAGGCGACGAGTCGAGAGGCAAGAACTCATTG
CGCATGGAGATTGCGCTCGACAAGAGGACTGCCAATGTCGATAGATCCAACAGAGCGCCGCGGACTACGGGATTG
TCGAAAGGGGATGAGATGATGAAATTCACGAGGTTCGCGGGGATGGATGTTGAGCCTGGCAAGAAATACACTGTC
AGACTTACGTTGAAGGGTCGGGATAGCTTTTAA
Gene >AgabiH97|112210
ATGCCCATAATATCTCTGCACAGATGGTTGGGACTATGGACGACTGCGGTTTCTGCGATTCATTCGCCCCGTTGC
TTCCCCGATCAATCGAGAATGGCTATTATAGCCTACAATAGTCTTATCTCCCGCCCTAGTGACAAAAGTGTCCTG
ACACACTGTGCGAGCGTCAACAAAGCGAAAATAATTATCGGCGATCGCTTTCTCGTCTGGTGTTACAACGACGTC
ACGTCTCCTTTTTCAAGGTGGGCTATGTATGCAGTAGCCCATAATTCACCCATAATCCAATGCACTCTTCAGCAT
GACTCCGAAGCATAGGCATGGAACGCAACCACATGTCCATCCGAGGAATCGGTACTCCGGGCTTATTTAAAAGAA
CGCAAGACCGCCTAATCAGAAATCCGTTCTTCCTCGTTCCTCCCTCTTTTGCTAACCACACCCACTACGTTCTGT
ACATCGTCCCCGATAAGATGCGCTCTGCCCCGCACGTGTCTTTTCTTGTCGACTCAGCTTCCCCTCGTTCCTCTT
TGTCTTCGGACTATGCTTCTGATTCCTCTGACGATTCCCTACCTCTCACGGCGGAGCCTAAAATCAAGCTCCATC
CGCTTCTGACACGGTCGCCGGAACGCATCTATAATCACTTCAACTATCATATTTTTTGGGACATTTGCGATGAAC
CGCGTTATGCCCAATATGTCGAGACTCTTGACACTCATGAACACCTCCGTGCGGATGACTGGAATGCGTCAGCTA
CCGAGCCGGCTGTCCAGTCTTTAAGAATCAGATATTCGATGCAGGAGAATTATGAGTTGATCGTTAAAGCTCAGA
CAAATACCGGAGTTACGATTGCGGAGATTTTCATGGCCCTCTACGACCACTTCCGCCGCCCTGGCAAAGGCGACG
AGTCGAGAGGCAAGAACTCATTGCGCATGGAGATTGCGCTCGACAAGAGGACTGCCAATGTCGATAGATCCAACA
GAGCGCCGCGGACTACGGGATTGTCGAAAGGGGATGAGATGATGAAATTCACGAGGTTCGCGGGGATGGATGTTG
AGCCTGGCAAGAAATACACTGTCAGACTTACGTTGAAGGGTCGGGATAGCTTTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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