Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|112200
Gene name
Locationscaffold_8:1588968..1590433
Strand+
Gene length (bp)1465
Transcript length (bp)1131
Coding sequence length (bp)1131
Protein length (aa) 377

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF19086 Terpene_syn_C_2 Terpene synthase family 2, C-terminal metal binding 8.0E-52 82 278
PF03936 Terpene_synth_C Terpene synthase family, metal binding domain 2.3E-10 153 277

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|A8NE23|COP3_COPC7 Alpha-muurolene synthase OS=Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) GN=COP3 PE=1 SV=1 8 339 5.0E-168
sp|A8NU13|COP4_COPC7 Linoleate 10R-lipoxygenase COP4 OS=Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) GN=COP4 PE=1 SV=1 13 344 9.0E-44
sp|P0DL13|PRO1_ARMGA Delta(6)-protoilludene synthase OS=Armillaria gallica GN=PRO1 PE=1 SV=1 14 357 4.0E-42
sp|Q6WP50|BOT2_BOTFU Presilphiperfolan-8-beta-ol synthase OS=Botryotinia fuckeliana GN=BOT2 PE=1 SV=1 76 348 9.0E-26
sp|B2J4A4|GERAS_NOSP7 Germacrene A synthase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=Npun_R3832 PE=1 SV=1 64 322 1.0E-22
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Swissprot ID Swissprot Description Start End E-value
sp|A8NE23|COP3_COPC7 Alpha-muurolene synthase OS=Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) GN=COP3 PE=1 SV=1 8 339 5.0E-168
sp|A8NU13|COP4_COPC7 Linoleate 10R-lipoxygenase COP4 OS=Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) GN=COP4 PE=1 SV=1 13 344 9.0E-44
sp|P0DL13|PRO1_ARMGA Delta(6)-protoilludene synthase OS=Armillaria gallica GN=PRO1 PE=1 SV=1 14 357 4.0E-42
sp|Q6WP50|BOT2_BOTFU Presilphiperfolan-8-beta-ol synthase OS=Botryotinia fuckeliana GN=BOT2 PE=1 SV=1 76 348 9.0E-26
sp|B2J4A4|GERAS_NOSP7 Germacrene A synthase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=Npun_R3832 PE=1 SV=1 64 322 1.0E-22
sp|D8RLD3|MTS17_SELML (+)-germacrene D synthase OS=Selaginella moellendorffii GN=SELMODRAFT_412756 PE=1 SV=1 2 324 2.0E-16
sp|B5GS26|DCADS_STRC2 (-)-delta-cadinene synthase OS=Streptomyces clavuligerus (strain ATCC 27064 / DSM 738 / JCM 4710 / NBRC 13307 / NCIMB 12785 / NRRL 3585 / VKM Ac-602) GN=SCreLAV_p0328 PE=1 SV=1 40 322 1.0E-15
sp|Q82RR7|TPC1_STRAW Avermitilol synthase OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680) GN=tpc1 PE=1 SV=1 137 324 2.0E-14
sp|J9R1J8|MTS1_SELML Microbial Terpene synthase-like protein 1 OS=Selaginella moellendorffii GN=SELMODRAFT_402353 PE=1 SV=2 60 324 7.0E-14
sp|Q82IY4|PTLA_STRAW Pentalenene synthase OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680) GN=ptlA PE=1 SV=1 62 333 5.0E-13
sp|Q9X839|CYC2_STRCO Germacradienol/geosmin synthase OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) GN=cyc2 PE=1 SV=3 13 323 6.0E-12
sp|J9R393|MTS13_SELML Microbial Terpene synthase-like protein 13 OS=Selaginella moellendorffii GN=SELMODRAFT_412537 PE=2 SV=2 24 324 2.0E-11
sp|E3VWJ0|PNTA_STRAE Pentalenene synthase OS=Streptomyces arenae GN=pntA PE=3 SV=1 62 337 2.0E-11
sp|Q55012|PENA_STREX Pentalenene synthase OS=Streptomyces exfoliatus GN=penA PE=1 SV=4 62 322 9.0E-10
sp|Q9X839|CYC2_STRCO Germacradienol/geosmin synthase OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) GN=cyc2 PE=1 SV=3 7 326 4.0E-09
sp|D8RNZ9|MTS22_SELML (3S,6E)-nerolidol synthase OS=Selaginella moellendorffii GN=SELMODRAFT_413294 PE=1 SV=1 9 351 3.0E-08
sp|B1W019|GCOA_STRGG (+)-caryolan-1-ol synthase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=gcoA PE=1 SV=1 83 287 5.0E-08
sp|Q9K499|CYC1_STRCO Epi-isozizaene synthase OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) GN=cyc1 PE=1 SV=1 152 323 1.0E-06
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GO

GO Term Description Terminal node
GO:0010333 terpene synthase activity Yes
GO:0000287 magnesium ion binding Yes
GO:0016829 lyase activity Yes
GO:0046872 metal ion binding No
GO:0003674 molecular_function No
GO:0016838 carbon-oxygen lyase activity, acting on phosphates No
GO:0005488 binding No
GO:0043167 ion binding No
GO:0016835 carbon-oxygen lyase activity No
GO:0003824 catalytic activity No
GO:0043169 cation binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 22 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|112200
MSYAQLKQGPASFILPDLVQLYKLAYHPAGDDVAKQSAQWLDAGCPGLNSKQRRALYGLQVGELTAFCYNTVDTG
RLRIVSDFMNYLFHLDKISDGLMTRETDVLANAVMNAFRYPDSFTPTEDCPKELNPAKVARDFWSRCVKDCGPGA
QARFKETMGLFFAAVNIEAKARDSNKIPDLESYIKVNRDTSGCKPCWALIEYALGIDLPDFVAEDLVIQSLNEYA
IDLVTWTNDIFSYNVEQARGDTHNMVDILMKYHNHTLESAMDYVGKLCSETMNNFERRKSQVPSWGPEIDDMVAR
YIQGLRNFTVGSLHWSFQTHHYFGDHGKIVKKQRLVHWLLPSKTNINVIRLLINRFNRSLSSMTPLLPFKIDHIS
F*
Coding >AgabiH97|112200
ATGAGTTACGCTCAGCTTAAACAAGGGCCTGCTTCCTTCATCCTTCCCGACCTCGTTCAACTTTACAAGCTCGCT
TATCATCCCGCTGGAGACGATGTTGCAAAGCAGTCTGCCCAATGGCTGGATGCTGGTTGTCCTGGCCTCAATTCA
AAGCAACGACGTGCTTTGTATGGACTTCAGGTTGGAGAACTCACTGCGTTCTGTTATAACACCGTGGATACGGGG
CGGCTACGCATTGTTTCTGATTTCATGAACTATCTATTCCACTTGGATAAAATCAGCGATGGATTGATGACACGC
GAGACGGACGTTCTTGCAAATGCTGTTATGAATGCTTTCCGTTACCCCGATTCTTTTACTCCAACAGAAGATTGC
CCCAAGGAGCTCAACCCAGCAAAAGTTGCCAGAGATTTCTGGTCTCGCTGTGTCAAAGATTGCGGTCCGGGTGCC
CAGGCTCGATTCAAGGAGACGATGGGCTTGTTCTTTGCCGCGGTAAATATCGAAGCCAAAGCCCGCGATAGCAAC
AAGATACCAGATCTCGAATCTTACATTAAAGTTAACCGAGACACATCAGGCTGCAAACCCTGCTGGGCCCTGATT
GAATATGCTCTCGGAATTGATCTCCCTGACTTTGTCGCTGAGGACTTGGTTATCCAGTCTCTCAACGAGTACGCC
ATCGACCTGGTCACTTGGACTAATGACATTTTCTCTTACAACGTCGAGCAAGCTCGCGGAGATACGCACAATATG
GTTGACATTCTAATGAAGTACCACAATCATACCCTCGAGAGTGCGATGGACTATGTTGGAAAATTGTGTTCTGAA
ACTATGAATAACTTTGAGCGACGAAAGAGTCAGGTTCCTTCTTGGGGCCCCGAGATCGATGACATGGTTGCGCGT
TATATCCAAGGCCTCCGGAATTTCACCGTCGGGTCTCTTCACTGGAGTTTCCAGACTCATCATTACTTCGGTGAT
CATGGCAAGATTGTTAAGAAACAAAGGCTTGTACACTGGCTTCTCCCTTCGAAAACCAACATCAATGTCATTCGA
CTGCTTATCAATCGCTTTAACCGTTCCCTATCCTCAATGACTCCCTTACTACCTTTCAAGATCGACCATATTAGT
TTCTGA
Transcript >AgabiH97|112200
ATGAGTTACGCTCAGCTTAAACAAGGGCCTGCTTCCTTCATCCTTCCCGACCTCGTTCAACTTTACAAGCTCGCT
TATCATCCCGCTGGAGACGATGTTGCAAAGCAGTCTGCCCAATGGCTGGATGCTGGTTGTCCTGGCCTCAATTCA
AAGCAACGACGTGCTTTGTATGGACTTCAGGTTGGAGAACTCACTGCGTTCTGTTATAACACCGTGGATACGGGG
CGGCTACGCATTGTTTCTGATTTCATGAACTATCTATTCCACTTGGATAAAATCAGCGATGGATTGATGACACGC
GAGACGGACGTTCTTGCAAATGCTGTTATGAATGCTTTCCGTTACCCCGATTCTTTTACTCCAACAGAAGATTGC
CCCAAGGAGCTCAACCCAGCAAAAGTTGCCAGAGATTTCTGGTCTCGCTGTGTCAAAGATTGCGGTCCGGGTGCC
CAGGCTCGATTCAAGGAGACGATGGGCTTGTTCTTTGCCGCGGTAAATATCGAAGCCAAAGCCCGCGATAGCAAC
AAGATACCAGATCTCGAATCTTACATTAAAGTTAACCGAGACACATCAGGCTGCAAACCCTGCTGGGCCCTGATT
GAATATGCTCTCGGAATTGATCTCCCTGACTTTGTCGCTGAGGACTTGGTTATCCAGTCTCTCAACGAGTACGCC
ATCGACCTGGTCACTTGGACTAATGACATTTTCTCTTACAACGTCGAGCAAGCTCGCGGAGATACGCACAATATG
GTTGACATTCTAATGAAGTACCACAATCATACCCTCGAGAGTGCGATGGACTATGTTGGAAAATTGTGTTCTGAA
ACTATGAATAACTTTGAGCGACGAAAGAGTCAGGTTCCTTCTTGGGGCCCCGAGATCGATGACATGGTTGCGCGT
TATATCCAAGGCCTCCGGAATTTCACCGTCGGGTCTCTTCACTGGAGTTTCCAGACTCATCATTACTTCGGTGAT
CATGGCAAGATTGTTAAGAAACAAAGGCTTGTACACTGGCTTCTCCCTTCGAAAACCAACATCAATGTCATTCGA
CTGCTTATCAATCGCTTTAACCGTTCCCTATCCTCAATGACTCCCTTACTACCTTTCAAGATCGACCATATTAGT
TTCTGA
Gene >AgabiH97|112200
ATGAGTTACGCTCAGCTTAAACAAGGGCCTGCTTCCTTCATCCTTCCCGACCTCGTTCAACTTTACAAGCTCGCT
TATCATCCCGCTGGAGACGATGTTGCAAAGCAGTCTGCCCAATGGCTGGATGCTGGTTGTCCTGGCCTCAATTCA
AAGCAACGACGTGCTTTGTATGGACTTCAGGTTGGAGAACTCACTGCGTTCTGTTATAACACCGTGGATACGGGG
CGGCTACGCATTGTTTCTGATTTCATGAACTATCTATTCCACTTGTGTGTCGTATATTCTTTCTTTTTTATAATC
GAGTCTCATTATGCTATGTAGGGATAAAATCAGCGATGGATTGATGACACGCGAGACGGACGTTCTTGCAAATGC
TGTTATGAATGCTTTCCGTTACCCCGATTCTTTTACTCCAACAGAAGATTGCCCCAAGGAGCTCAACCCAGCAAA
AGTTGCCAGAGAGTACGTCTTCTTCCTTCACTGATTTCAAAAAGATTCTAATCACCTACTTTGATAGTTTCTGGT
CTCGCTGTGTCAAAGATTGCGGTCCGGGTGCCCAGGCTCGATTCAAGGAGACGATGGGCTTGTTCTTTGCCGCGG
TAAATATCGAAGCCAAAGCCCGCGATAGCAACAAGATACCAGATCTCGAATCTTACATTAAAGTTAACCGAGACA
CATCAGGCAAGTGATATGATAAGGTTCTTCACCTGTGAATAATTTCTTCCACTTTGGTACAGGCTGCAAACCCTG
CTGGGCCCTGATTGAGTAAGTCTACGCCTCAGAAGAATCTATCATGATTTAATTTATGCGATCTTGCTTTAGATA
TGCTCTCGGAATTGATCTCCCTGACTTTGTCGCTGAGGACTTGGTTATCCAGTCTCTCAACGAGTACGCCATCGA
CCTGGTCACTTGGACTAATGTAAGCGGCGACTCTGTCATTGGAAATAAGGCGACGACTAAAGTCAGACTCTCAGG
ACATTTTCTCTTACAACGTCGAGCAAGCTCGCGGAGATACGCACAATATGGTTGACATTCTAATGAAGTACCACA
ATCATACCCTCGAGAGTGCGATGGACTATGTTGGAAAATTGTGTTCTGAAACTATGAATAACTTTGAGCGACGAA
AGAGTCAGGTTCCTTCTTGGGGCCCCGAGATCGATGACATGGTTGCGCGTTATATCCAAGGCCTCCGGAATTTCA
CCGTCGGGTATGTCAATACCTTGTGTGGTGATATGGTGACGCCAGCGTACTGATGTTTAGTTCTAGGTCTCTTCA
CTGGAGTTTCCAGACTCATCATTACTTCGGTGATCATGGCAAGATTGTTAAGAAACAAAGGCTTGTACACTGGCT
TCTCCCTTCGAAAACCAACATCAATGTCATTCGACTGCTTATCAATCGCTTTAACCGTTCCCTATCCTCAATGAC
TCCCTTACTACCTTTCAAGATCGACCATATTAGTTTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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