Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|112170
Gene name
Locationscaffold_8:1581415..1583030
Strand-
Gene length (bp)1615
Transcript length (bp)1065
Coding sequence length (bp)1065
Protein length (aa) 355

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular 0.0837 0.0945 0.8824 0.3648 0.0478 0.007 0.2407 0.1639 0.1577 0.0108

SignalP

SignalP signal predicted Location Score
Yes 1 - 22 0.999708

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

Gene cluster ID Type of secondary metabolism gene
Cluster 14 (None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Orthologs

Orthofinder run ID1
Orthogroup505
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|078900
Agaricus bisporus var bisporus H39 AgabiH39|112170
Agaricus bisporus var bisporus H97 AgabiH97|078900
Agaricus bisporus var bisporus H97 AgabiH97|112170 (this protein)
Rhodonia placenta FPRL280 RhoplFPRL280|109_10

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|112170
MMTRNFQTLLLISGYLATTAYSALLPDNAPDKTQSGQTGTNQCGTQSSPNSTCQNSFLNSVDDFCLYAPPEPGAD
SVIGNTERIEVAWCTKSNHGTRLIPPGAIKGAHFIQTPDFVQVTGFGDLTQLNVPKGDFGGELDPHGADGNGNPI
GGLVFSSAFGELEQIPEWTNFMSDSEFCFRACKPGPNAAQLCQHIYDVMGCMWNMPGNYDSGFDTCQADTGEPMG
VYGSSTFFQGQPATPPPHPAPSSSNCMTTSTIGDVNAVLPTSTSSIGSTGSNSQVVASTRASTVPSASSPAPLTS
FPTKDSSARATATSTVAVAPASKSDSGAWGSNDGLDRLVITISVGLAFGAALLL*
Coding >AgabiH97|112170
ATGATGACTCGTAATTTCCAAACTCTGCTTCTAATTTCCGGCTACCTCGCCACTACCGCTTACTCGGCGCTCCTC
CCCGATAATGCACCAGATAAAACACAGTCTGGGCAAACTGGTACCAATCAATGTGGTACACAATCTAGCCCCAAC
TCTACATGCCAAAACTCTTTCCTTAACTCCGTTGACGATTTTTGTCTTTATGCACCTCCCGAGCCCGGCGCAGAT
TCTGTGATTGGTAATACTGAGAGAATTGAAGTGGCCTGGTGCACCAAGAGCAACCACGGAACCCGTCTCATCCCT
CCAGGAGCAATTAAGGGTGCTCATTTCATTCAAACGCCCGATTTCGTTCAAGTAACCGGGTTCGGTGATTTGACT
CAACTCAATGTTCCCAAAGGCGATTTCGGTGGTGAGCTCGACCCCCACGGGGCGGACGGAAACGGCAACCCCATC
GGAGGCTTAGTATTTTCAAGTGCCTTTGGTGAACTCGAACAAATCCCAGAGTGGACAAACTTCATGTCAGACTCG
GAGTTTTGTTTCCGAGCTTGCAAGCCCGGTCCTAACGCAGCTCAACTCTGTCAACACATCTACGATGTCATGGGT
TGCATGTGGAATATGCCCGGTAATTACGACTCAGGCTTCGATACTTGCCAAGCCGACACTGGAGAGCCTATGGGT
GTTTACGGCTCCTCAACGTTCTTCCAAGGACAACCCGCGACGCCTCCGCCCCACCCAGCCCCCTCTAGCTCAAAT
TGTATGACAACCTCTACTATCGGGGATGTCAATGCTGTATTACCCACAAGTACCTCGAGTATCGGTTCGACTGGA
TCCAACAGCCAGGTAGTAGCGTCCACCCGGGCCTCGACAGTCCCCTCCGCTAGTAGCCCAGCCCCACTAACATCA
TTCCCTACAAAGGACTCGTCCGCCCGCGCCACCGCAACTTCAACTGTGGCTGTTGCCCCAGCGAGCAAGTCAGAC
TCTGGTGCCTGGGGTTCAAATGATGGGCTTGACAGGTTGGTGATAACCATCAGCGTTGGCCTCGCATTTGGTGCT
GCACTCTTGCTTTAA
Transcript >AgabiH97|112170
ATGATGACTCGTAATTTCCAAACTCTGCTTCTAATTTCCGGCTACCTCGCCACTACCGCTTACTCGGCGCTCCTC
CCCGATAATGCACCAGATAAAACACAGTCTGGGCAAACTGGTACCAATCAATGTGGTACACAATCTAGCCCCAAC
TCTACATGCCAAAACTCTTTCCTTAACTCCGTTGACGATTTTTGTCTTTATGCACCTCCCGAGCCCGGCGCAGAT
TCTGTGATTGGTAATACTGAGAGAATTGAAGTGGCCTGGTGCACCAAGAGCAACCACGGAACCCGTCTCATCCCT
CCAGGAGCAATTAAGGGTGCTCATTTCATTCAAACGCCCGATTTCGTTCAAGTAACCGGGTTCGGTGATTTGACT
CAACTCAATGTTCCCAAAGGCGATTTCGGTGGTGAGCTCGACCCCCACGGGGCGGACGGAAACGGCAACCCCATC
GGAGGCTTAGTATTTTCAAGTGCCTTTGGTGAACTCGAACAAATCCCAGAGTGGACAAACTTCATGTCAGACTCG
GAGTTTTGTTTCCGAGCTTGCAAGCCCGGTCCTAACGCAGCTCAACTCTGTCAACACATCTACGATGTCATGGGT
TGCATGTGGAATATGCCCGGTAATTACGACTCAGGCTTCGATACTTGCCAAGCCGACACTGGAGAGCCTATGGGT
GTTTACGGCTCCTCAACGTTCTTCCAAGGACAACCCGCGACGCCTCCGCCCCACCCAGCCCCCTCTAGCTCAAAT
TGTATGACAACCTCTACTATCGGGGATGTCAATGCTGTATTACCCACAAGTACCTCGAGTATCGGTTCGACTGGA
TCCAACAGCCAGGTAGTAGCGTCCACCCGGGCCTCGACAGTCCCCTCCGCTAGTAGCCCAGCCCCACTAACATCA
TTCCCTACAAAGGACTCGTCCGCCCGCGCCACCGCAACTTCAACTGTGGCTGTTGCCCCAGCGAGCAAGTCAGAC
TCTGGTGCCTGGGGTTCAAATGATGGGCTTGACAGGTTGGTGATAACCATCAGCGTTGGCCTCGCATTTGGTGCT
GCACTCTTGCTTTAA
Gene >AgabiH97|112170
ATGATGACTCGTAATTTCCAAACTCTGCTTCTAATTTCCGGCTACCTCGCCACTACCGCTTACTCGGCGCTCCTC
CCCGATAATGCACCAGATAAAACACAGTCTGGGCAAACTGGTACCAATCAATGTGGTACACAATCTAGCCCCAAC
TCTACATGCCAAAACTCTTTCCGTGAGTAGCTCCGCATTTTTTCAATCATTTTATTTTTTCATCATCAGCGTGTC
TTTCTTTGGAACTGAATGATGCATCTGCTAGTTAACTCCGTTGACGATTTTTGTCTTTATGCACCTCCCGAGCCC
GGCGCAGATTCTGTGATTGGTAATACTGAGGTATGGCTGATTTGATGATATCGTTCAAGGCTCTCAACTTTGTTG
AAACAGAGAATTGAAGTGGCCTGGTGCACCAAGGTATGAGCCGTCGTATCAATAGTAGTCAATGGGTGGCTGATA
ATGGTCATGTTTAGAGCAACCACGGAACCCGTCTCATCCCTCCAGGAGCAATTAAGGGTGCTCATTTCATTCAAA
CGCCCGATTTCGTTCAAGTAACCGGTTAGCATTAATAGTATCAAATCTAGACGTATGGTAACCCGAACTAATCGA
TGTAATATATTACAGGGTTCGGTGATTTGACTCAACTCAATGTTCCCAAAGGCGATTTCGGTGTAGGTGTCTATA
AGCAACTTCTGAGTGCATTTGAGCTGAATGATTATATTCGTTTTTCGTAGGGTGAGGTACGAATCTCAATTACTT
TCTTTGGGTGAGGTGTAATCTTCTATTTCGTCTTAGCTCGACCCCCACGGGGCGGACGGAAACGGTGGGTCAACA
ATTCCTCTCTCTTATACGACACAGGTCTCACCAAACCACGACAGGCAACCCCATCGGAGGCTTAGTATTTTCAAG
TGCCTTTGGTGAACTCGAACAAATCCCAGAGTGGACAGTGAGCGATTTCCCTGACGCCAATCTTCGGCTATATAT
CTGATCGCGATTTGCGCTTAGAACTTCATGTCAGACTCGGAGTTTTGTTTCCGAGCTTGCAAGCCCGGTCCTAAC
GCAGCTCAACTCTGTCAACACATCTACGATGTCATGGGTTGCATGTGGAATATGCCCGGTAATTACGACTCAGGC
TTCGATACTTGCCAAGCCGACACTGGAGAGGTAACCCTCGGTTTTCTTATTTAAAGTATATCTCGAAATGAATTG
ATATGTGCTCTTTTAGCCTATGGGTGTTTACGGCTCCTCAACGTTCTTCCAAGGACAACCCGCGACGCCTCCGCC
CCACCCAGCCCCCTCTAGCTCAAATTGTATGACAACCTCTACTATCGGGGATGTCAATGCTGTATTACCCACAAG
TACCTCGAGTATCGGTTCGACTGGATCCAACAGCCAGGTAGTAGCGTCCACCCGGGCCTCGACAGTCCCCTCCGC
TAGTAGCCCAGCCCCACTAACATCATTCCCTACAAAGGACTCGTCCGCCCGCGCCACCGCAACTTCAACTGTGGC
TGTTGCCCCAGCGAGCAAGTCAGACTCTGGTGCCTGGGGTTCAAATGATGGGCTTGACAGGTTGGTGATAACCAT
CAGCGTTGGCCTCGCATTTGGTGCTGCACTCTTGCTTTAA

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