Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|112170
Gene name
Locationscaffold_8:1581415..1583030
Strand-
Gene length (bp)1615
Transcript length (bp)1065
Coding sequence length (bp)1065
Protein length (aa) 355

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 23 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|112170
MMTRNFQTLLLISGYLATTAYSALLPDNAPDKTQSGQTGTNQCGTQSSPNSTCQNSFLNSVDDFCLYAPPEPGAD
SVIGNTERIEVAWCTKSNHGTRLIPPGAIKGAHFIQTPDFVQVTGFGDLTQLNVPKGDFGGELDPHGADGNGNPI
GGLVFSSAFGELEQIPEWTNFMSDSEFCFRACKPGPNAAQLCQHIYDVMGCMWNMPGNYDSGFDTCQADTGEPMG
VYGSSTFFQGQPATPPPHPAPSSSNCMTTSTIGDVNAVLPTSTSSIGSTGSNSQVVASTRASTVPSASSPAPLTS
FPTKDSSARATATSTVAVAPASKSDSGAWGSNDGLDRLVITISVGLAFGAALLL*
Coding >AgabiH97|112170
ATGATGACTCGTAATTTCCAAACTCTGCTTCTAATTTCCGGCTACCTCGCCACTACCGCTTACTCGGCGCTCCTC
CCCGATAATGCACCAGATAAAACACAGTCTGGGCAAACTGGTACCAATCAATGTGGTACACAATCTAGCCCCAAC
TCTACATGCCAAAACTCTTTCCTTAACTCCGTTGACGATTTTTGTCTTTATGCACCTCCCGAGCCCGGCGCAGAT
TCTGTGATTGGTAATACTGAGAGAATTGAAGTGGCCTGGTGCACCAAGAGCAACCACGGAACCCGTCTCATCCCT
CCAGGAGCAATTAAGGGTGCTCATTTCATTCAAACGCCCGATTTCGTTCAAGTAACCGGGTTCGGTGATTTGACT
CAACTCAATGTTCCCAAAGGCGATTTCGGTGGTGAGCTCGACCCCCACGGGGCGGACGGAAACGGCAACCCCATC
GGAGGCTTAGTATTTTCAAGTGCCTTTGGTGAACTCGAACAAATCCCAGAGTGGACAAACTTCATGTCAGACTCG
GAGTTTTGTTTCCGAGCTTGCAAGCCCGGTCCTAACGCAGCTCAACTCTGTCAACACATCTACGATGTCATGGGT
TGCATGTGGAATATGCCCGGTAATTACGACTCAGGCTTCGATACTTGCCAAGCCGACACTGGAGAGCCTATGGGT
GTTTACGGCTCCTCAACGTTCTTCCAAGGACAACCCGCGACGCCTCCGCCCCACCCAGCCCCCTCTAGCTCAAAT
TGTATGACAACCTCTACTATCGGGGATGTCAATGCTGTATTACCCACAAGTACCTCGAGTATCGGTTCGACTGGA
TCCAACAGCCAGGTAGTAGCGTCCACCCGGGCCTCGACAGTCCCCTCCGCTAGTAGCCCAGCCCCACTAACATCA
TTCCCTACAAAGGACTCGTCCGCCCGCGCCACCGCAACTTCAACTGTGGCTGTTGCCCCAGCGAGCAAGTCAGAC
TCTGGTGCCTGGGGTTCAAATGATGGGCTTGACAGGTTGGTGATAACCATCAGCGTTGGCCTCGCATTTGGTGCT
GCACTCTTGCTTTAA
Transcript >AgabiH97|112170
ATGATGACTCGTAATTTCCAAACTCTGCTTCTAATTTCCGGCTACCTCGCCACTACCGCTTACTCGGCGCTCCTC
CCCGATAATGCACCAGATAAAACACAGTCTGGGCAAACTGGTACCAATCAATGTGGTACACAATCTAGCCCCAAC
TCTACATGCCAAAACTCTTTCCTTAACTCCGTTGACGATTTTTGTCTTTATGCACCTCCCGAGCCCGGCGCAGAT
TCTGTGATTGGTAATACTGAGAGAATTGAAGTGGCCTGGTGCACCAAGAGCAACCACGGAACCCGTCTCATCCCT
CCAGGAGCAATTAAGGGTGCTCATTTCATTCAAACGCCCGATTTCGTTCAAGTAACCGGGTTCGGTGATTTGACT
CAACTCAATGTTCCCAAAGGCGATTTCGGTGGTGAGCTCGACCCCCACGGGGCGGACGGAAACGGCAACCCCATC
GGAGGCTTAGTATTTTCAAGTGCCTTTGGTGAACTCGAACAAATCCCAGAGTGGACAAACTTCATGTCAGACTCG
GAGTTTTGTTTCCGAGCTTGCAAGCCCGGTCCTAACGCAGCTCAACTCTGTCAACACATCTACGATGTCATGGGT
TGCATGTGGAATATGCCCGGTAATTACGACTCAGGCTTCGATACTTGCCAAGCCGACACTGGAGAGCCTATGGGT
GTTTACGGCTCCTCAACGTTCTTCCAAGGACAACCCGCGACGCCTCCGCCCCACCCAGCCCCCTCTAGCTCAAAT
TGTATGACAACCTCTACTATCGGGGATGTCAATGCTGTATTACCCACAAGTACCTCGAGTATCGGTTCGACTGGA
TCCAACAGCCAGGTAGTAGCGTCCACCCGGGCCTCGACAGTCCCCTCCGCTAGTAGCCCAGCCCCACTAACATCA
TTCCCTACAAAGGACTCGTCCGCCCGCGCCACCGCAACTTCAACTGTGGCTGTTGCCCCAGCGAGCAAGTCAGAC
TCTGGTGCCTGGGGTTCAAATGATGGGCTTGACAGGTTGGTGATAACCATCAGCGTTGGCCTCGCATTTGGTGCT
GCACTCTTGCTTTAA
Gene >AgabiH97|112170
ATGATGACTCGTAATTTCCAAACTCTGCTTCTAATTTCCGGCTACCTCGCCACTACCGCTTACTCGGCGCTCCTC
CCCGATAATGCACCAGATAAAACACAGTCTGGGCAAACTGGTACCAATCAATGTGGTACACAATCTAGCCCCAAC
TCTACATGCCAAAACTCTTTCCGTGAGTAGCTCCGCATTTTTTCAATCATTTTATTTTTTCATCATCAGCGTGTC
TTTCTTTGGAACTGAATGATGCATCTGCTAGTTAACTCCGTTGACGATTTTTGTCTTTATGCACCTCCCGAGCCC
GGCGCAGATTCTGTGATTGGTAATACTGAGGTATGGCTGATTTGATGATATCGTTCAAGGCTCTCAACTTTGTTG
AAACAGAGAATTGAAGTGGCCTGGTGCACCAAGGTATGAGCCGTCGTATCAATAGTAGTCAATGGGTGGCTGATA
ATGGTCATGTTTAGAGCAACCACGGAACCCGTCTCATCCCTCCAGGAGCAATTAAGGGTGCTCATTTCATTCAAA
CGCCCGATTTCGTTCAAGTAACCGGTTAGCATTAATAGTATCAAATCTAGACGTATGGTAACCCGAACTAATCGA
TGTAATATATTACAGGGTTCGGTGATTTGACTCAACTCAATGTTCCCAAAGGCGATTTCGGTGTAGGTGTCTATA
AGCAACTTCTGAGTGCATTTGAGCTGAATGATTATATTCGTTTTTCGTAGGGTGAGGTACGAATCTCAATTACTT
TCTTTGGGTGAGGTGTAATCTTCTATTTCGTCTTAGCTCGACCCCCACGGGGCGGACGGAAACGGTGGGTCAACA
ATTCCTCTCTCTTATACGACACAGGTCTCACCAAACCACGACAGGCAACCCCATCGGAGGCTTAGTATTTTCAAG
TGCCTTTGGTGAACTCGAACAAATCCCAGAGTGGACAGTGAGCGATTTCCCTGACGCCAATCTTCGGCTATATAT
CTGATCGCGATTTGCGCTTAGAACTTCATGTCAGACTCGGAGTTTTGTTTCCGAGCTTGCAAGCCCGGTCCTAAC
GCAGCTCAACTCTGTCAACACATCTACGATGTCATGGGTTGCATGTGGAATATGCCCGGTAATTACGACTCAGGC
TTCGATACTTGCCAAGCCGACACTGGAGAGGTAACCCTCGGTTTTCTTATTTAAAGTATATCTCGAAATGAATTG
ATATGTGCTCTTTTAGCCTATGGGTGTTTACGGCTCCTCAACGTTCTTCCAAGGACAACCCGCGACGCCTCCGCC
CCACCCAGCCCCCTCTAGCTCAAATTGTATGACAACCTCTACTATCGGGGATGTCAATGCTGTATTACCCACAAG
TACCTCGAGTATCGGTTCGACTGGATCCAACAGCCAGGTAGTAGCGTCCACCCGGGCCTCGACAGTCCCCTCCGC
TAGTAGCCCAGCCCCACTAACATCATTCCCTACAAAGGACTCGTCCGCCCGCGCCACCGCAACTTCAACTGTGGC
TGTTGCCCCAGCGAGCAAGTCAGACTCTGGTGCCTGGGGTTCAAATGATGGGCTTGACAGGTTGGTGATAACCAT
CAGCGTTGGCCTCGCATTTGGTGCTGCACTCTTGCTTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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