Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|112010
Gene name
Locationscaffold_8:1533151..1534321
Strand+
Gene length (bp)1170
Transcript length (bp)960
Coding sequence length (bp)960
Protein length (aa) 320

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03372 Exo_endo_phos Endonuclease/Exonuclease/phosphatase family 8.4E-11 106 287

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0003824 catalytic activity Yes
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|112010
MRENHLLQKPGGNFSKHSLVFDGVESAKLQRCRRPSQVLIKFEAEPEASHVFNIYLPLAARRLCPRVFSAFRAPN
RLWVPVSSSYAPSLATQLLPHTSRLPLELITWNIDAFSARGISRARLLLDVILAKHPDIICLQEVTLDVRTSILN
NPKVREGFLVTDAEDLTSFEGVPFANMTLLSNKRFAFDVESQREGDGQVWKMEILANLLHEPGCDGGLIAGDFNA
IRPEDHTLLEKNGLEDAWLAVHGRDGANGTTWGVGVQRKGGLGLGRLDKIAMLGLEAKEMEILRPGMIERPKPGE
PSDHIPYSDHFGLRLGFTF*
Coding >AgabiH97|112010
ATGAGAGAAAACCATTTACTACAGAAACCGGGTGGAAATTTCTCGAAGCATTCATTAGTGTTTGACGGGGTAGAG
TCAGCAAAGCTGCAGCGTTGTCGACGACCGAGCCAAGTACTCATCAAATTTGAAGCTGAGCCTGAAGCTTCCCAC
GTTTTTAATATATACCTTCCACTGGCAGCCAGGAGACTGTGCCCACGCGTTTTCTCTGCCTTCAGGGCACCCAAC
CGCCTATGGGTGCCAGTATCTTCGAGCTACGCACCGAGCCTGGCGACACAACTGCTGCCTCACACATCTCGCTTA
CCTCTCGAGCTTATAACATGGAATATTGACGCCTTCTCCGCGCGTGGCATCTCACGAGCCAGGCTCCTCCTAGAT
GTGATCCTAGCCAAACATCCTGATATCATTTGCCTCCAAGAAGTGACATTGGATGTCCGCACCTCTATACTCAAC
AATCCGAAAGTCCGTGAAGGGTTCCTAGTGACCGATGCTGAAGACCTTACATCGTTTGAAGGGGTACCCTTTGCC
AACATGACACTGCTGTCGAATAAGCGTTTTGCGTTTGACGTGGAGTCGCAGAGAGAGGGTGATGGACAAGTATGG
AAGATGGAGATCCTTGCCAACCTCTTACATGAGCCTGGGTGCGATGGTGGACTTATCGCGGGAGACTTCAATGCA
ATCCGCCCCGAGGACCATACTCTCCTTGAGAAGAACGGGCTTGAAGACGCTTGGCTTGCAGTGCATGGAAGGGAC
GGAGCTAATGGAACCACTTGGGGTGTTGGAGTGCAACGAAAGGGTGGACTGGGACTGGGAAGGTTGGACAAGATT
GCGATGCTGGGTTTGGAGGCGAAGGAGATGGAGATTCTACGCCCTGGTATGATTGAGCGACCCAAGCCAGGAGAG
CCTTCCGATCATATCCCCTACAGCGACCATTTTGGGCTGAGACTTGGCTTTACTTTCTGA
Transcript >AgabiH97|112010
ATGAGAGAAAACCATTTACTACAGAAACCGGGTGGAAATTTCTCGAAGCATTCATTAGTGTTTGACGGGGTAGAG
TCAGCAAAGCTGCAGCGTTGTCGACGACCGAGCCAAGTACTCATCAAATTTGAAGCTGAGCCTGAAGCTTCCCAC
GTTTTTAATATATACCTTCCACTGGCAGCCAGGAGACTGTGCCCACGCGTTTTCTCTGCCTTCAGGGCACCCAAC
CGCCTATGGGTGCCAGTATCTTCGAGCTACGCACCGAGCCTGGCGACACAACTGCTGCCTCACACATCTCGCTTA
CCTCTCGAGCTTATAACATGGAATATTGACGCCTTCTCCGCGCGTGGCATCTCACGAGCCAGGCTCCTCCTAGAT
GTGATCCTAGCCAAACATCCTGATATCATTTGCCTCCAAGAAGTGACATTGGATGTCCGCACCTCTATACTCAAC
AATCCGAAAGTCCGTGAAGGGTTCCTAGTGACCGATGCTGAAGACCTTACATCGTTTGAAGGGGTACCCTTTGCC
AACATGACACTGCTGTCGAATAAGCGTTTTGCGTTTGACGTGGAGTCGCAGAGAGAGGGTGATGGACAAGTATGG
AAGATGGAGATCCTTGCCAACCTCTTACATGAGCCTGGGTGCGATGGTGGACTTATCGCGGGAGACTTCAATGCA
ATCCGCCCCGAGGACCATACTCTCCTTGAGAAGAACGGGCTTGAAGACGCTTGGCTTGCAGTGCATGGAAGGGAC
GGAGCTAATGGAACCACTTGGGGTGTTGGAGTGCAACGAAAGGGTGGACTGGGACTGGGAAGGTTGGACAAGATT
GCGATGCTGGGTTTGGAGGCGAAGGAGATGGAGATTCTACGCCCTGGTATGATTGAGCGACCCAAGCCAGGAGAG
CCTTCCGATCATATCCCCTACAGCGACCATTTTGGGCTGAGACTTGGCTTTACTTTCTGA
Gene >AgabiH97|112010
ATGAGAGAAAACCATTTACTACAGAAACCGGGTGGAAATTTCTCGAAGCATTCATTAGTGTTGTGAGTCGACTCA
GGAGTCTTTTTGTATGACGAATTGCGATTAGTGACGGGGTAGAGTCAGCAAAGCTGCAGCGTTGTCGACGACCGA
GCCAAGTACTCATCAAATTTGAAGCTGAGCCTGAAGCTTCCCACGTTTTTAATATATACCTTCCACTGGCAGCCA
GGAGACTGTGCCCACGCGTTTTCTCTGCCTTCAGGGCACCCAACCGCCTATGGGTGCCAGTATCTTCGAGCTACG
CACCGAGCCTGGCGACACAACTGCTGCCTCACACATCTCGCTTACCTCTCGAGCTTATAACATGGAATATTGACG
CCTTCTCCGCGCGTGGCATCTCACGAGCCAGGCTCCTCCTAGATGTGATCCTAGCCAAACATCCTGATATCATTT
GCCTCCAAGAAGTGACATTGGATGTCCGCACCTCTATACTCAACAATCCGAAAGTCCGTGAAGGGTTCCTAGTGA
CCGATGCTGAAGACCTTACATCGTTTGAAGGGGTACCCTTTGCCAACATGACACTGCTGTCGAATAAGCGTTTTG
CGTTTGACGTGGAGTCGCAGAGAGAGGGTGATGGAGTCGAGAGAGGGAAAAAGTTCATGCTTGGTTCCGTTACAC
GTGTCGAACTACCCAGCAAGTATGGAAGGTGCGATTTCCGTCGATGTTATTCCACCTTCCACCACGTTCAAAGCT
TGTCGTATCATCAACTTTCATTTCGACTCTCTTTGGAACACACTCTCTCATCGTGCCAAACAGATGGAGATCCTT
GCCAACCTCTTACATGAGCCTGGGTGCGATGGTGGACTTATCGCGGGAGACTTCAATGCAATCCGCCCCGAGGAC
CATACTCTCCTTGAGAAGAACGGGCTTGAAGACGCTTGGCTTGCAGTGCATGGAAGGGACGGAGCTAATGGAACC
ACTTGGGGTGTTGGAGTGCAACGAAAGGGTGGACTGGGACTGGGAAGGTTGGACAAGATTGCGATGCTGGGTTTG
GAGGCGAAGGAGATGGAGATTCTACGCCCTGGTATGATTGAGCGACCCAAGCCAGGAGAGCCTTCCGATCATATC
CCCTACAGCGACCATTTTGGGCTGAGACTTGGCTTTACTTTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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