© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | AgabiH97|111910 |
| Gene name | |
| Location | scaffold_8:1504252..1505293 |
| Strand | + |
| Gene length (bp) | 1041 |
| Transcript length (bp) | 774 |
| Coding sequence length (bp) | 774 |
| Protein length (aa) | 258 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01105 | EMP24_GP25L | emp24/gp25L/p24 family/GOLD | 4.3E-31 | 24 | 202 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q4P958|TMEDA_USTMA | Endoplasmic reticulum vesicle protein 25 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=ERV25 PE=3 SV=1 | 21 | 205 | 5.0E-68 |
| sp|P0CN72|TMEDA_CRYNJ | Endoplasmic reticulum vesicle protein 25 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=ERV25 PE=3 SV=1 | 5 | 189 | 1.0E-58 |
| sp|P0CN73|TMEDA_CRYNB | Endoplasmic reticulum vesicle protein 25 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=ERV25 PE=3 SV=1 | 5 | 189 | 2.0E-56 |
| sp|Q9HEK4|TMEDA_NEUCR | Endoplasmic reticulum vesicle protein 25 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=erv-1 PE=3 SV=3 | 23 | 199 | 1.0E-31 |
| sp|Q5B5L5|TMEDA_EMENI | Endoplasmic reticulum vesicle protein 25 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=erv25 PE=3 SV=1 | 6 | 200 | 8.0E-31 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q4P958|TMEDA_USTMA | Endoplasmic reticulum vesicle protein 25 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=ERV25 PE=3 SV=1 | 21 | 205 | 5.0E-68 |
| sp|P0CN72|TMEDA_CRYNJ | Endoplasmic reticulum vesicle protein 25 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=ERV25 PE=3 SV=1 | 5 | 189 | 1.0E-58 |
| sp|P0CN73|TMEDA_CRYNB | Endoplasmic reticulum vesicle protein 25 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=ERV25 PE=3 SV=1 | 5 | 189 | 2.0E-56 |
| sp|Q9HEK4|TMEDA_NEUCR | Endoplasmic reticulum vesicle protein 25 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=erv-1 PE=3 SV=3 | 23 | 199 | 1.0E-31 |
| sp|Q5B5L5|TMEDA_EMENI | Endoplasmic reticulum vesicle protein 25 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=erv25 PE=3 SV=1 | 6 | 200 | 8.0E-31 |
| sp|Q5A302|TMEDA_CANAL | Endoplasmic reticulum vesicle protein 25 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=ERV25 PE=3 SV=1 | 1 | 200 | 5.0E-30 |
| sp|Q6BTC2|TMEDA_DEBHA | Endoplasmic reticulum vesicle protein 25 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=ERV25 PE=3 SV=2 | 3 | 200 | 2.0E-27 |
| sp|Q4HY20|TMEDA_GIBZE | Endoplasmic reticulum vesicle protein 25 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=ERV25 PE=3 SV=1 | 3 | 216 | 3.0E-27 |
| sp|Q4WQL0|TMEDA_ASPFU | Endoplasmic reticulum vesicle protein 25 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=erv25 PE=3 SV=1 | 22 | 200 | 5.0E-27 |
| sp|Q6CWW7|TMEDA_KLULA | Endoplasmic reticulum vesicle protein 25 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=ERV25 PE=3 SV=1 | 1 | 199 | 6.0E-27 |
| sp|P54837|TMEDA_YEAST | Endoplasmic reticulum vesicle protein 25 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERV25 PE=1 SV=1 | 1 | 201 | 2.0E-25 |
| sp|Q6FRZ3|TMEDA_CANGA | Endoplasmic reticulum vesicle protein 25 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=ERV25 PE=3 SV=2 | 21 | 199 | 2.0E-22 |
| sp|O13946|TMEDA_SCHPO | Endoplasmic reticulum vesicle protein 25 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=erv25 PE=3 SV=1 | 1 | 201 | 2.0E-21 |
| sp|Q9D1D4|TMEDA_MOUSE | Transmembrane emp24 domain-containing protein 10 OS=Mus musculus GN=Tmed10 PE=1 SV=1 | 7 | 205 | 3.0E-20 |
| sp|Q90515|TMEDA_TAKRU | Transmembrane emp24 domain-containing protein 10 OS=Takifugu rubripes GN=tmed10 PE=3 SV=1 | 5 | 205 | 2.0E-19 |
| sp|Q63584|TMEDA_RAT | Transmembrane emp24 domain-containing protein 10 OS=Rattus norvegicus GN=Tmed10 PE=1 SV=2 | 16 | 205 | 2.0E-19 |
| sp|Q28735|TMEDA_RABIT | Transmembrane emp24 domain-containing protein 10 OS=Oryctolagus cuniculus GN=TMED10 PE=1 SV=1 | 16 | 205 | 1.0E-18 |
| sp|Q5E971|TMEDA_BOVIN | Transmembrane emp24 domain-containing protein 10 OS=Bos taurus GN=TMED10 PE=2 SV=1 | 16 | 205 | 1.0E-18 |
| sp|Q759T8|TMEDA_ASHGO | Endoplasmic reticulum vesicle protein 25 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=ERV25 PE=3 SV=1 | 9 | 216 | 5.0E-18 |
| sp|O35587|TMEDA_MESAU | Transmembrane protein Tmp21 OS=Mesocricetus auratus GN=TMED10 PE=1 SV=1 | 16 | 205 | 1.0E-17 |
| sp|P49755|TMEDA_HUMAN | Transmembrane emp24 domain-containing protein 10 OS=Homo sapiens GN=TMED10 PE=1 SV=2 | 20 | 205 | 8.0E-17 |
| sp|Q5RE32|TMEDA_PONAB | Transmembrane emp24 domain-containing protein 10 OS=Pongo abelii GN=TMED10 PE=2 SV=1 | 20 | 205 | 3.0E-16 |
| sp|Q99KF1|TMED9_MOUSE | Transmembrane emp24 domain-containing protein 9 OS=Mus musculus GN=Tmed9 PE=1 SV=2 | 33 | 216 | 4.0E-14 |
| sp|Q5I0E7|TMED9_RAT | Transmembrane emp24 domain-containing protein 9 OS=Rattus norvegicus GN=Tmed9 PE=1 SV=1 | 33 | 216 | 5.0E-14 |
| sp|Q3T133|TMED9_BOVIN | Transmembrane emp24 domain-containing protein 9 OS=Bos taurus GN=TMED9 PE=1 SV=1 | 33 | 216 | 5.0E-14 |
| sp|Q9BVK6|TMED9_HUMAN | Transmembrane emp24 domain-containing protein 9 OS=Homo sapiens GN=TMED9 PE=1 SV=2 | 33 | 216 | 5.0E-14 |
| sp|Q6C503|TMEDA_YARLI | Endoplasmic reticulum vesicle protein 25 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=ERV25 PE=3 SV=1 | 5 | 201 | 7.0E-14 |
| sp|Q9I7K5|TMEDE_DROME | Transmembrane emp24 domain-containing protein eca OS=Drosophila melanogaster GN=eca PE=2 SV=2 | 9 | 200 | 5.0E-13 |
| sp|B4LYB8|TMEDE_DROVI | Transmembrane emp24 domain-containing protein eca OS=Drosophila virilis GN=eca PE=3 SV=1 | 9 | 200 | 8.0E-13 |
| sp|B4QWH9|TMEDE_DROSI | Transmembrane emp24 domain-containing protein eca OS=Drosophila simulans GN=eca PE=3 SV=1 | 9 | 200 | 8.0E-13 |
| sp|B4PVC6|TMEDE_DROYA | Transmembrane emp24 domain-containing protein eca OS=Drosophila yakuba GN=eca PE=3 SV=1 | 9 | 200 | 8.0E-13 |
| sp|B4JG34|TMEDE_DROGR | Transmembrane emp24 domain-containing protein eca OS=Drosophila grimshawi GN=eca PE=3 SV=1 | 61 | 200 | 9.0E-13 |
| sp|B3MTS8|TMEDE_DROAN | Transmembrane emp24 domain-containing protein eca OS=Drosophila ananassae GN=eca PE=3 SV=1 | 61 | 207 | 1.0E-12 |
| sp|B4GMC3|TMEDE_DROPE | Transmembrane emp24 domain-containing protein eca OS=Drosophila persimilis GN=eca PE=3 SV=1 | 61 | 207 | 1.0E-12 |
| sp|B4KB41|TMEDE_DROMO | Transmembrane emp24 domain-containing protein eca OS=Drosophila mojavensis GN=eca PE=3 SV=1 | 9 | 200 | 1.0E-12 |
| sp|B3NZM5|TMEDE_DROER | Transmembrane emp24 domain-containing protein eca OS=Drosophila erecta GN=eca PE=3 SV=1 | 9 | 200 | 1.0E-12 |
| sp|B4HJV5|TMEDE_DROSE | Transmembrane emp24 domain-containing protein eca OS=Drosophila sechellia GN=eca PE=3 SV=1 | 9 | 200 | 1.0E-12 |
| sp|B4NKL0|TMEDE_DROWI | Transmembrane emp24 domain-containing protein eca OS=Drosophila willistoni GN=eca PE=3 SV=1 | 61 | 200 | 2.0E-12 |
| sp|Q295B2|TMEDE_DROPS | Transmembrane emp24 domain-containing protein eca OS=Drosophila pseudoobscura pseudoobscura GN=eca PE=3 SV=1 | 61 | 200 | 2.0E-12 |
| sp|Q8RWM6|P24D5_ARATH | Transmembrane emp24 domain-containing protein p24delta5 OS=Arabidopsis thaliana GN=At1g21900 PE=1 SV=1 | 114 | 203 | 2.0E-11 |
| sp|Q9FVU0|P24D4_ARATH | Transmembrane emp24 domain-containing protein p24delta4 OS=Arabidopsis thaliana GN=CYB PE=1 SV=1 | 31 | 201 | 7.0E-11 |
| sp|Q6IDL4|P24D3_ARATH | Transmembrane emp24 domain-containing protein p24delta3 OS=Arabidopsis thaliana GN=At1g09580 PE=1 SV=1 | 46 | 200 | 6.0E-10 |
| sp|Q8GYG1|P24D7_ARATH | Transmembrane emp24 domain-containing protein p24delta7 OS=Arabidopsis thaliana GN=At1g14010 PE=2 SV=1 | 3 | 197 | 2.0E-08 |
| sp|P32803|EMP24_YEAST | Endosomal protein P24B OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=EMP24 PE=1 SV=1 | 90 | 205 | 6.0E-07 |
| sp|B4NIY1|TMEDA_DROWI | Transmembrane emp24 domain-containing protein bai OS=Drosophila willistoni GN=bai PE=3 SV=1 | 117 | 200 | 4.0E-06 |
| sp|B4JYU5|TMEDA_DROGR | Transmembrane emp24 domain-containing protein bai OS=Drosophila grimshawi GN=bai PE=3 SV=2 | 128 | 200 | 6.0E-06 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Endoplasmic reticulum|Golgi apparatus | Signal peptide|Transmembrane domain | 0.1221 | 0.1081 | 0.0496 | 0.092 | 0.1641 | 0.0505 | 0.8547 | 0.2869 | 0.7408 | 0.0487 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 21 | 0.999754 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 4 | 26 | 22 |
| 2 | 191 | 213 | 22 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| Casing | Casing mycelium | 99.75 | 56.54 | 142.96 |
| Initials | Initials knots | 57.63 | 33.05 | 82.22 |
| Pileal_Stipeal_center | Stage I stipe center | 117.66 | 70.14 | 165.19 |
| Pileal_Stipeal_shell | Stage I stipe shell | 142.07 | 83.27 | 200.86 |
| DIF_stipe_center | Stage II stipe center | 127.34 | 76.67 | 178.02 |
| DIF_stipe_shell | Stage II stipe shell | 117.32 | 70.59 | 164.06 |
| DIF_stipe_skin | Stage II stipe skin | 115.54 | 69.29 | 161.79 |
| DIF_cap_skin | Stage II cap skin | 181.26 | 109.18 | 253.35 |
| DIF_cap_tissue | Stage II cap tissue | 182.02 | 109.55 | 254.49 |
| DIF_gill_tissue | Stage II gill tissue | 167.64 | 101.45 | 233.83 |
| YFB_stipe_center | Young fruiting body stipe center | 120.77 | 71.16 | 170.39 |
| YFB_stipe_shell | Young fruiting body stipe shell | 106.86 | 63.19 | 150.54 |
| YFB_stipe_skin | Young fruiting body stipe skin | 116.71 | 69.53 | 163.90 |
| YFB_cap_skin | Young fruiting body cap skin | 175.34 | 106.19 | 244.49 |
| YFB_cap_tissue | Young fruiting body cap tissue | 202.99 | 122.66 | 283.31 |
| YFB_gill_tissue | Young fruiting body gill tissue | 142.94 | 86.36 | 199.52 |
| YFB_veil | Young fruiting body veil | 151.31 | 91.68 | 210.93 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| Casing | DIF_gill_tissue | 0.060104 | no |
| Casing | YFB_stipe_center | 0.622019 | no |
| Casing | YFB_stipe_shell | 0.893936 | no |
| Casing | YFB_stipe_skin | 0.710235 | no |
| Casing | YFB_cap_skin | 0.039165 | yes |
| Casing | YFB_cap_tissue | 0.007782 | yes |
| Casing | YFB_gill_tissue | 0.244165 | no |
| Casing | YFB_veil | 0.154391 | no |
| Casing | Initials | 0.057747 | no |
| Casing | Pileal_Stipeal_center | 0.688749 | no |
| Casing | Pileal_Stipeal_shell | 0.256222 | no |
| Casing | DIF_stipe_center | 0.488913 | no |
| Casing | DIF_stipe_shell | 0.689049 | no |
| Casing | DIF_stipe_skin | 0.727462 | no |
| Casing | DIF_cap_skin | 0.025963 | yes |
| Casing | DIF_cap_tissue | 0.028675 | yes |
| DIF_gill_tissue | YFB_stipe_center | 0.284846 | no |
| DIF_gill_tissue | YFB_stipe_shell | 0.102511 | no |
| DIF_gill_tissue | YFB_stipe_skin | 0.230996 | no |
| DIF_gill_tissue | YFB_cap_skin | 0.932548 | no |
| DIF_gill_tissue | YFB_cap_tissue | 0.607011 | no |
| DIF_gill_tissue | YFB_gill_tissue | 0.688016 | no |
| DIF_gill_tissue | YFB_veil | 0.821391 | no |
| YFB_stipe_center | YFB_stipe_shell | 0.780115 | no |
| YFB_stipe_center | YFB_stipe_skin | 0.949789 | no |
| YFB_stipe_center | YFB_cap_skin | 0.197709 | no |
| YFB_stipe_center | YFB_cap_tissue | 0.054776 | no |
| YFB_stipe_center | YFB_gill_tissue | 0.670585 | no |
| YFB_stipe_center | YFB_veil | 0.517551 | no |
| YFB_stipe_shell | YFB_stipe_skin | 0.856338 | no |
| YFB_stipe_shell | YFB_cap_skin | 0.066956 | no |
| YFB_stipe_shell | YFB_cap_tissue | 0.012274 | yes |
| YFB_stipe_shell | YFB_gill_tissue | 0.373669 | no |
| YFB_stipe_shell | YFB_veil | 0.254947 | no |
| YFB_stipe_skin | YFB_cap_skin | 0.159996 | no |
| YFB_stipe_skin | YFB_cap_tissue | 0.037818 | yes |
| YFB_stipe_skin | YFB_gill_tissue | 0.585506 | no |
| YFB_stipe_skin | YFB_veil | 0.439155 | no |
| YFB_cap_skin | YFB_cap_tissue | 0.720243 | no |
| YFB_cap_skin | YFB_gill_tissue | 0.570149 | no |
| YFB_cap_skin | YFB_veil | 0.713058 | no |
| YFB_cap_tissue | YFB_gill_tissue | 0.236256 | no |
| YFB_cap_tissue | YFB_veil | 0.349308 | no |
| YFB_gill_tissue | YFB_veil | 0.910321 | no |
| Initials | DIF_gill_tissue | 0.000613 | yes |
| Initials | YFB_stipe_center | 0.005302 | yes |
| Initials | YFB_stipe_shell | 0.022631 | yes |
| Initials | YFB_stipe_skin | 0.011041 | yes |
| Initials | YFB_cap_skin | 0.000613 | yes |
| Initials | YFB_cap_tissue | 0.000613 | yes |
| Initials | YFB_gill_tissue | 0.000613 | yes |
| Initials | YFB_veil | 0.000613 | yes |
| Initials | Pileal_Stipeal_center | 0.007782 | yes |
| Initials | Pileal_Stipeal_shell | 0.000613 | yes |
| Initials | DIF_stipe_center | 0.002525 | yes |
| Initials | DIF_stipe_shell | 0.008121 | yes |
| Initials | DIF_stipe_skin | 0.009446 | yes |
| Initials | DIF_cap_skin | 0.000613 | yes |
| Initials | DIF_cap_tissue | 0.000613 | yes |
| Pileal_Stipeal_center | DIF_gill_tissue | 0.246828 | no |
| Pileal_Stipeal_center | YFB_stipe_center | 0.962855 | no |
| Pileal_Stipeal_center | YFB_stipe_shell | 0.839410 | no |
| Pileal_Stipeal_center | YFB_stipe_skin | 0.988465 | no |
| Pileal_Stipeal_center | YFB_cap_skin | 0.169576 | no |
| Pileal_Stipeal_center | YFB_cap_tissue | 0.039836 | yes |
| Pileal_Stipeal_center | YFB_gill_tissue | 0.608145 | no |
| Pileal_Stipeal_center | YFB_veil | 0.461800 | no |
| Pileal_Stipeal_center | Pileal_Stipeal_shell | 0.623461 | no |
| Pileal_Stipeal_center | DIF_stipe_center | 0.870402 | no |
| Pileal_Stipeal_center | DIF_stipe_shell | 0.995188 | no |
| Pileal_Stipeal_center | DIF_stipe_skin | 0.973313 | no |
| Pileal_Stipeal_center | DIF_cap_skin | 0.124559 | no |
| Pileal_Stipeal_center | DIF_cap_tissue | 0.129965 | no |
| Pileal_Stipeal_shell | DIF_gill_tissue | 0.679315 | no |
| Pileal_Stipeal_shell | YFB_stipe_center | 0.686968 | no |
| Pileal_Stipeal_shell | YFB_stipe_shell | 0.382679 | no |
| Pileal_Stipeal_shell | YFB_stipe_skin | 0.604348 | no |
| Pileal_Stipeal_shell | YFB_cap_skin | 0.560766 | no |
| Pileal_Stipeal_shell | YFB_cap_tissue | 0.234184 | no |
| Pileal_Stipeal_shell | YFB_gill_tissue | 0.990540 | no |
| Pileal_Stipeal_shell | YFB_veil | 0.901968 | no |
| Pileal_Stipeal_shell | DIF_stipe_center | 0.808105 | no |
| Pileal_Stipeal_shell | DIF_stipe_shell | 0.606700 | no |
| Pileal_Stipeal_shell | DIF_stipe_skin | 0.570990 | no |
| Pileal_Stipeal_shell | DIF_cap_skin | 0.478395 | no |
| Pileal_Stipeal_shell | DIF_cap_tissue | 0.477168 | no |
| DIF_stipe_center | DIF_gill_tissue | 0.391490 | no |
| DIF_stipe_center | YFB_stipe_center | 0.917502 | no |
| DIF_stipe_center | YFB_stipe_shell | 0.647034 | no |
| DIF_stipe_center | YFB_stipe_skin | 0.853055 | no |
| DIF_stipe_center | YFB_cap_skin | 0.295620 | no |
| DIF_stipe_center | YFB_cap_tissue | 0.088095 | no |
| DIF_stipe_center | YFB_gill_tissue | 0.789950 | no |
| DIF_stipe_center | YFB_veil | 0.647222 | no |
| DIF_stipe_center | DIF_stipe_shell | 0.860021 | no |
| DIF_stipe_center | DIF_stipe_skin | 0.829882 | no |
| DIF_stipe_center | DIF_cap_skin | 0.228145 | no |
| DIF_stipe_center | DIF_cap_tissue | 0.229251 | no |
| DIF_stipe_shell | DIF_gill_tissue | 0.230552 | no |
| DIF_stipe_shell | YFB_stipe_center | 0.958000 | no |
| DIF_stipe_shell | YFB_stipe_shell | 0.841754 | no |
| DIF_stipe_shell | YFB_stipe_skin | 0.991979 | no |
| DIF_stipe_shell | YFB_cap_skin | 0.152605 | no |
| DIF_stipe_shell | YFB_cap_tissue | 0.034837 | yes |
| DIF_stipe_shell | YFB_gill_tissue | 0.587404 | no |
| DIF_stipe_shell | YFB_veil | 0.439686 | no |
| DIF_stipe_shell | DIF_stipe_skin | 0.976960 | no |
| DIF_stipe_shell | DIF_cap_skin | 0.110708 | no |
| DIF_stipe_shell | DIF_cap_tissue | 0.116868 | no |
| DIF_stipe_skin | DIF_gill_tissue | 0.201976 | no |
| DIF_stipe_skin | YFB_stipe_center | 0.934697 | no |
| DIF_stipe_skin | YFB_stipe_shell | 0.873503 | no |
| DIF_stipe_skin | YFB_stipe_skin | 0.985786 | no |
| DIF_stipe_skin | YFB_cap_skin | 0.133711 | no |
| DIF_stipe_skin | YFB_cap_tissue | 0.030134 | yes |
| DIF_stipe_skin | YFB_gill_tissue | 0.548260 | no |
| DIF_stipe_skin | YFB_veil | 0.404135 | no |
| DIF_stipe_skin | DIF_cap_skin | 0.092503 | no |
| DIF_stipe_skin | DIF_cap_tissue | 0.098939 | no |
| DIF_cap_skin | DIF_gill_tissue | 0.867760 | no |
| DIF_cap_skin | YFB_stipe_center | 0.146853 | no |
| DIF_cap_skin | YFB_stipe_shell | 0.045911 | yes |
| DIF_cap_skin | YFB_stipe_skin | 0.112109 | no |
| DIF_cap_skin | YFB_cap_skin | 0.948609 | no |
| DIF_cap_skin | YFB_cap_tissue | 0.794377 | no |
| DIF_cap_skin | YFB_gill_tissue | 0.484655 | no |
| DIF_cap_skin | YFB_veil | 0.624854 | no |
| DIF_cap_skin | DIF_cap_tissue | 0.993279 | no |
| DIF_cap_tissue | DIF_gill_tissue | 0.865466 | no |
| DIF_cap_tissue | YFB_stipe_center | 0.156118 | no |
| DIF_cap_tissue | YFB_stipe_shell | 0.048626 | yes |
| DIF_cap_tissue | YFB_stipe_skin | 0.120821 | no |
| DIF_cap_tissue | YFB_cap_skin | 0.944399 | no |
| DIF_cap_tissue | YFB_cap_tissue | 0.810457 | no |
| DIF_cap_tissue | YFB_gill_tissue | 0.489179 | no |
| DIF_cap_tissue | YFB_veil | 0.624182 | no |
| Orthofinder run ID | 1 |
| Orthogroup | 4984 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Agaricus bisporus var bisporus H39 | AgabiH39|111910 |
| Agaricus bisporus var bisporus H97 | AgabiH97|111910 (this protein) |
| Rhodonia placenta FPRL280 | RhoplFPRL280|109_19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|111910 MYSLLLALFSLVALVPQQALGIKFSLPAYRYPSSKCIWNAAHPDTLVIVTANVVIGQNQRVDIEIVDSSPQKNVY LSKRGIKAETRLAITTHGEGEVGVCLKNYLEGDVSSNVASKLASVVDLDVDIGADAVDYNAIANQESLSSLETEM RKLEGVVKEIVDEMEYLKKRETRFTSTNTSTNDRVQNFAWFSIFSLAALVVSVIFCFPLHYIISNFGGGLLPRLS SSTTTTATQTSPRHCAPRFNATTNSAKNRVQA* |
| Coding | >AgabiH97|111910 ATGTATTCTCTCCTCCTCGCGCTTTTTTCCCTTGTGGCCCTTGTTCCCCAGCAAGCTCTGGGCATAAAATTTTCT TTACCGGCGTATCGATACCCTTCGTCAAAGTGCATATGGAATGCAGCGCATCCGGACACGCTGGTAATCGTGACG GCAAACGTGGTTATTGGCCAGAACCAGAGGGTGGATATTGAAATCGTGGATTCGTCACCGCAGAAGAATGTCTAT CTGAGCAAGCGGGGGATCAAAGCTGAGACGAGGTTGGCTATTACGACGCATGGAGAGGGCGAGGTTGGGGTTTGT TTAAAGAATTATTTGGAGGGTGATGTGTCGTCGAATGTTGCTTCCAAGCTGGCGAGCGTCGTGGATTTGGACGTG GATATTGGCGCTGATGCTGTCGACTACAATGCCATTGCGAACCAGGAGTCGCTGTCGAGCCTCGAAACCGAGATG CGGAAGCTGGAAGGCGTGGTGAAGGAGATTGTGGACGAGATGGAGTACCTCAAGAAACGAGAGACTCGCTTTACC TCCACCAACACCTCCACAAACGACCGTGTGCAAAACTTTGCCTGGTTCTCTATTTTCTCTCTTGCCGCGCTCGTT GTTAGTGTTATTTTTTGTTTTCCATTACATTACATAATCTCCAACTTTGGCGGTGGTCTGTTGCCCCGTCTTTCT TCCTCCACAACCACAACCGCCACGCAAACCAGTCCTCGTCACTGCGCTCCAAGGTTCAACGCTACCACTAACAGC GCCAAAAACAGAGTACAGGCCTAA |
| Transcript | >AgabiH97|111910 ATGTATTCTCTCCTCCTCGCGCTTTTTTCCCTTGTGGCCCTTGTTCCCCAGCAAGCTCTGGGCATAAAATTTTCT TTACCGGCGTATCGATACCCTTCGTCAAAGTGCATATGGAATGCAGCGCATCCGGACACGCTGGTAATCGTGACG GCAAACGTGGTTATTGGCCAGAACCAGAGGGTGGATATTGAAATCGTGGATTCGTCACCGCAGAAGAATGTCTAT CTGAGCAAGCGGGGGATCAAAGCTGAGACGAGGTTGGCTATTACGACGCATGGAGAGGGCGAGGTTGGGGTTTGT TTAAAGAATTATTTGGAGGGTGATGTGTCGTCGAATGTTGCTTCCAAGCTGGCGAGCGTCGTGGATTTGGACGTG GATATTGGCGCTGATGCTGTCGACTACAATGCCATTGCGAACCAGGAGTCGCTGTCGAGCCTCGAAACCGAGATG CGGAAGCTGGAAGGCGTGGTGAAGGAGATTGTGGACGAGATGGAGTACCTCAAGAAACGAGAGACTCGCTTTACC TCCACCAACACCTCCACAAACGACCGTGTGCAAAACTTTGCCTGGTTCTCTATTTTCTCTCTTGCCGCGCTCGTT GTTAGTGTTATTTTTTGTTTTCCATTACATTACATAATCTCCAACTTTGGCGGTGGTCTGTTGCCCCGTCTTTCT TCCTCCACAACCACAACCGCCACGCAAACCAGTCCTCGTCACTGCGCTCCAAGGTTCAACGCTACCACTAACAGC GCCAAAAACAGAGTACAGGCCTAA |
| Gene | >AgabiH97|111910 ATGTATTCTCTCCTCCTCGCGCTTTTTTCCCTTGTGGCCCTTGTTCCCCAGCAAGCTCTGGGCATAAAATTTTCT TTACCGGCGTATCGATACCCTTCGTCAAAGTGCATATGGAATGCAGCGCATCCGGACACGCTGGTAATCGTGACG GCAAACGTGGTTATTGGCCAGAACCAGAGGGTGGATATTGAAATCGTGGATTCGTCACCGCAGAAGAATGTCTAT CTGAGCAAGCGGGGGATCAAAGCTGAGACGAGGTTGGCTATTACGACGCATGGAGAGGGCGAGGTTGGGGTTTGT TTAAAGAATTATTTGGAGGGTGGTGAGTCGCCTCGAGGATTTCAAAGTAAATCATGCTGAGCGTCTATTGTAGAT GTGTCGTCGAATGTTGCTTCCAAGCTGGCGAGCGTCGTGGATTTGGACGTGGATATTGGCGCTGATGCTGTCGAC TACAAGTAGGTGTCCGTGTAGGCCGTGTGTTACATGTGCTGATGGAAATGTGTGCCAGTGCCATTGCGAACCAGG AGTCGCTGTCGAGCCTCGAAACCGAGATGCGGAAGCTGGAAGGCGTGGTGAAGGAGATTGTGGACGAGATGGAGT ACCTCAAGAAACGAGAGACTCGCTTTACCTCCACCAACAGTACGCTATGTCTTTTTCCGCCGAAAGTCTGTTTTC TCACCGACTTTCCCCAGCCTCCACAAACGACCGTGTGCAAAACTTTGCCTGGTTCTCTATTTTCTCTCTTGCCGC GCTCGGTGTATGGCAGGTTCTGCATCTGCGCTCCTACTTTAAACGCAAGTACCTCATCGACTAGTTGTTAGTGTT ATTTTTTGTTTTCCATTACATTACATAATCTCCAACTTTGGCGGTGGTCTGTTGCCCCGTCTTTCTTCCTCCACA ACCACAACCGCCACGCAAACCAGTCCTCGTCACTGCGCTCCAAGGTTCAACGCTACCACTAACAGCGCCAAAAAC AGAGGCAAAGGGCATACGTCGTATTTGCAACAGCTCGGCTGACTTGATTCCCCAGTACAGGCCTAA |