Protein ID | AgabiH97|111470 |
Gene name | |
Location | scaffold_8:1403368..1404143 |
Strand | + |
Gene length (bp) | 775 |
Transcript length (bp) | 714 |
Coding sequence length (bp) | 714 |
Protein length (aa) | 238 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 21 | 0.45 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
Casing | Casing mycelium | 3.46 | 1.09 | 5.82 |
Initials | Initials knots | 5.77 | 2.13 | 9.41 |
Pileal_Stipeal_center | Stage I stipe center | 3.55 | 1.12 | 5.98 |
Pileal_Stipeal_shell | Stage I stipe shell | 4.95 | 1.79 | 8.11 |
DIF_stipe_center | Stage II stipe center | 4.88 | 1.78 | 7.98 |
DIF_stipe_shell | Stage II stipe shell | 3.63 | 1.22 | 6.05 |
DIF_stipe_skin | Stage II stipe skin | 4.33 | 1.54 | 7.11 |
DIF_cap_skin | Stage II cap skin | 2.43 | 0.64 | 4.21 |
DIF_cap_tissue | Stage II cap tissue | 3.34 | 1.07 | 5.61 |
DIF_gill_tissue | Stage II gill tissue | 2.93 | 0.90 | 4.96 |
YFB_stipe_center | Young fruiting body stipe center | 3.34 | 1.06 | 5.62 |
YFB_stipe_shell | Young fruiting body stipe shell | 3.56 | 1.13 | 5.99 |
YFB_stipe_skin | Young fruiting body stipe skin | 3.66 | 1.23 | 6.09 |
YFB_cap_skin | Young fruiting body cap skin | 2.48 | 0.67 | 4.28 |
YFB_cap_tissue | Young fruiting body cap tissue | 2.43 | 0.60 | 4.27 |
YFB_gill_tissue | Young fruiting body gill tissue | 3.59 | 1.16 | 6.02 |
YFB_veil | Young fruiting body veil | 3.28 | 1.05 | 5.52 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
Casing | DIF_gill_tissue | 0.841253 | no |
Casing | YFB_stipe_center | 0.969909 | no |
Casing | YFB_stipe_shell | 0.975429 | no |
Casing | YFB_stipe_skin | 0.949175 | no |
Casing | YFB_cap_skin | 0.627976 | no |
Casing | YFB_cap_tissue | 0.618584 | no |
Casing | YFB_gill_tissue | 0.968194 | no |
Casing | YFB_veil | 0.956369 | no |
Casing | Initials | 0.331262 | no |
Casing | Pileal_Stipeal_center | 0.976932 | no |
Casing | Pileal_Stipeal_shell | 0.553908 | no |
Casing | DIF_stipe_center | 0.575213 | no |
Casing | DIF_stipe_shell | 0.956257 | no |
Casing | DIF_stipe_skin | 0.754440 | no |
Casing | DIF_cap_skin | 0.601269 | no |
Casing | DIF_cap_tissue | 0.970108 | no |
DIF_gill_tissue | YFB_stipe_center | 0.880929 | no |
DIF_gill_tissue | YFB_stipe_shell | 0.806771 | no |
DIF_gill_tissue | YFB_stipe_skin | 0.757013 | no |
DIF_gill_tissue | YFB_cap_skin | 0.844650 | no |
DIF_gill_tissue | YFB_cap_tissue | 0.830856 | no |
DIF_gill_tissue | YFB_gill_tissue | 0.796931 | no |
DIF_gill_tissue | YFB_veil | 0.900765 | no |
YFB_stipe_center | YFB_stipe_shell | 0.945624 | no |
YFB_stipe_center | YFB_stipe_skin | 0.915400 | no |
YFB_stipe_center | YFB_cap_skin | 0.672696 | no |
YFB_stipe_center | YFB_cap_tissue | 0.660228 | no |
YFB_stipe_center | YFB_gill_tissue | 0.939601 | no |
YFB_stipe_center | YFB_veil | 0.985097 | no |
YFB_stipe_shell | YFB_stipe_skin | 0.974850 | no |
YFB_stipe_shell | YFB_cap_skin | 0.584223 | no |
YFB_stipe_shell | YFB_cap_tissue | 0.578032 | no |
YFB_stipe_shell | YFB_gill_tissue | 0.994521 | no |
YFB_stipe_shell | YFB_veil | 0.929701 | no |
YFB_stipe_skin | YFB_cap_skin | 0.531015 | no |
YFB_stipe_skin | YFB_cap_tissue | 0.521395 | no |
YFB_stipe_skin | YFB_gill_tissue | 0.983168 | no |
YFB_stipe_skin | YFB_veil | 0.899030 | no |
YFB_cap_skin | YFB_cap_tissue | 0.984458 | no |
YFB_cap_skin | YFB_gill_tissue | 0.572164 | no |
YFB_cap_skin | YFB_veil | 0.698274 | no |
YFB_cap_tissue | YFB_gill_tissue | 0.563134 | no |
YFB_cap_tissue | YFB_veil | 0.682606 | no |
YFB_gill_tissue | YFB_veil | 0.920469 | no |
Initials | DIF_gill_tissue | 0.162096 | no |
Initials | YFB_stipe_center | 0.288884 | no |
Initials | YFB_stipe_shell | 0.376239 | no |
Initials | YFB_stipe_skin | 0.386027 | no |
Initials | YFB_cap_skin | 0.084017 | no |
Initials | YFB_cap_tissue | 0.090829 | no |
Initials | YFB_gill_tissue | 0.384974 | no |
Initials | YFB_veil | 0.272348 | no |
Initials | Pileal_Stipeal_center | 0.370347 | no |
Initials | Pileal_Stipeal_shell | 0.841593 | no |
Initials | DIF_stipe_center | 0.821237 | no |
Initials | DIF_stipe_shell | 0.377028 | no |
Initials | DIF_stipe_skin | 0.645992 | no |
Initials | DIF_cap_skin | 0.068640 | no |
Initials | DIF_cap_tissue | 0.291749 | no |
Pileal_Stipeal_center | DIF_gill_tissue | 0.809347 | no |
Pileal_Stipeal_center | YFB_stipe_center | 0.947818 | no |
Pileal_Stipeal_center | YFB_stipe_shell | 0.995138 | no |
Pileal_Stipeal_center | YFB_stipe_skin | 0.973583 | no |
Pileal_Stipeal_center | YFB_cap_skin | 0.589465 | no |
Pileal_Stipeal_center | YFB_cap_tissue | 0.582808 | no |
Pileal_Stipeal_center | YFB_gill_tissue | 0.990850 | no |
Pileal_Stipeal_center | YFB_veil | 0.932566 | no |
Pileal_Stipeal_center | Pileal_Stipeal_shell | 0.594232 | no |
Pileal_Stipeal_center | DIF_stipe_center | 0.613438 | no |
Pileal_Stipeal_center | DIF_stipe_shell | 0.979951 | no |
Pileal_Stipeal_center | DIF_stipe_skin | 0.789105 | no |
Pileal_Stipeal_center | DIF_cap_skin | 0.562908 | no |
Pileal_Stipeal_center | DIF_cap_tissue | 0.947574 | no |
Pileal_Stipeal_shell | DIF_gill_tissue | 0.322249 | no |
Pileal_Stipeal_shell | YFB_stipe_center | 0.500103 | no |
Pileal_Stipeal_shell | YFB_stipe_shell | 0.594542 | no |
Pileal_Stipeal_shell | YFB_stipe_skin | 0.620140 | no |
Pileal_Stipeal_shell | YFB_cap_skin | 0.175675 | no |
Pileal_Stipeal_shell | YFB_cap_tissue | 0.180324 | no |
Pileal_Stipeal_shell | YFB_gill_tissue | 0.607845 | no |
Pileal_Stipeal_shell | YFB_veil | 0.475568 | no |
Pileal_Stipeal_shell | DIF_stipe_center | 0.987316 | no |
Pileal_Stipeal_shell | DIF_stipe_shell | 0.606480 | no |
Pileal_Stipeal_shell | DIF_stipe_skin | 0.861792 | no |
Pileal_Stipeal_shell | DIF_cap_skin | 0.151108 | no |
Pileal_Stipeal_shell | DIF_cap_tissue | 0.500971 | no |
DIF_stipe_center | DIF_gill_tissue | 0.344404 | no |
DIF_stipe_center | YFB_stipe_center | 0.526593 | no |
DIF_stipe_center | YFB_stipe_shell | 0.622967 | no |
DIF_stipe_center | YFB_stipe_skin | 0.649350 | no |
DIF_stipe_center | YFB_cap_skin | 0.189035 | no |
DIF_stipe_center | YFB_cap_tissue | 0.194610 | no |
DIF_stipe_center | YFB_gill_tissue | 0.636278 | no |
DIF_stipe_center | YFB_veil | 0.498900 | no |
DIF_stipe_center | DIF_stipe_shell | 0.637596 | no |
DIF_stipe_center | DIF_stipe_skin | 0.883204 | no |
DIF_stipe_center | DIF_cap_skin | 0.166446 | no |
DIF_stipe_center | DIF_cap_tissue | 0.527470 | no |
DIF_stipe_shell | DIF_gill_tissue | 0.768859 | no |
DIF_stipe_shell | YFB_stipe_center | 0.922233 | no |
DIF_stipe_shell | YFB_stipe_shell | 0.981653 | no |
DIF_stipe_shell | YFB_stipe_skin | 0.994271 | no |
DIF_stipe_shell | YFB_cap_skin | 0.537876 | no |
DIF_stipe_shell | YFB_cap_tissue | 0.527537 | no |
DIF_stipe_shell | YFB_gill_tissue | 0.988269 | no |
DIF_stipe_shell | YFB_veil | 0.906251 | no |
DIF_stipe_shell | DIF_stipe_skin | 0.812559 | no |
DIF_stipe_shell | DIF_cap_skin | 0.506011 | no |
DIF_stipe_shell | DIF_cap_tissue | 0.921998 | no |
DIF_stipe_skin | DIF_gill_tissue | 0.505238 | no |
DIF_stipe_skin | YFB_stipe_center | 0.700504 | no |
DIF_stipe_skin | YFB_stipe_shell | 0.791328 | no |
DIF_stipe_skin | YFB_stipe_skin | 0.819112 | no |
DIF_stipe_skin | YFB_cap_skin | 0.302508 | no |
DIF_stipe_skin | YFB_cap_tissue | 0.306617 | no |
DIF_stipe_skin | YFB_gill_tissue | 0.803002 | no |
DIF_stipe_skin | YFB_veil | 0.678685 | no |
DIF_stipe_skin | DIF_cap_skin | 0.276147 | no |
DIF_stipe_skin | DIF_cap_tissue | 0.700639 | no |
DIF_cap_skin | DIF_gill_tissue | 0.825244 | no |
DIF_cap_skin | YFB_stipe_center | 0.647578 | no |
DIF_cap_skin | YFB_stipe_shell | 0.564102 | no |
DIF_cap_skin | YFB_stipe_skin | 0.500971 | no |
DIF_cap_skin | YFB_cap_skin | 0.983795 | no |
DIF_cap_skin | YFB_cap_tissue | 0.994125 | no |
DIF_cap_skin | YFB_gill_tissue | 0.550251 | no |
DIF_cap_skin | YFB_veil | 0.674590 | no |
DIF_cap_skin | DIF_cap_tissue | 0.647862 | no |
DIF_cap_tissue | DIF_gill_tissue | 0.879805 | no |
DIF_cap_tissue | YFB_stipe_center | 0.994551 | no |
DIF_cap_tissue | YFB_stipe_shell | 0.946100 | no |
DIF_cap_tissue | YFB_stipe_skin | 0.916413 | no |
DIF_cap_tissue | YFB_cap_skin | 0.676927 | no |
DIF_cap_tissue | YFB_cap_tissue | 0.665242 | no |
DIF_cap_tissue | YFB_gill_tissue | 0.939991 | no |
DIF_cap_tissue | YFB_veil | 0.985076 | no |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >AgabiH97|111470 MVYPGILIFLTLAIFQWALACETECKDGVTNVFVGNYSSPVHQVFRKLGERLSDRLSLNEDPQYYLQPINDTFHK EAYDFIQNAIFSRFHGKCQDVTTGINPIGCPNPSCPVICGTPGSLVYHYPELEAIVHTAVKALLVQIVKPSSPAY SNSSSRIYQAYHSNNMVRSWLRFSPAHVPGTYGVSDRHTLNQSLSGVFRDIPSLLDNECGGPRKDAPHTFPRCSW KKTMTKYILRFP* |
Coding | >AgabiH97|111470 ATGGTTTATCCCGGGATTCTTATCTTTCTGACTCTGGCCATTTTCCAGTGGGCTCTGGCGTGTGAAACAGAGTGC AAGGATGGCGTCACCAATGTTTTCGTCGGTAACTACTCGAGCCCCGTTCACCAAGTCTTCCGCAAGCTCGGCGAA CGGCTATCTGACCGGCTTTCCCTCAACGAGGATCCTCAATATTACCTCCAACCGATCAATGATACCTTTCACAAG GAAGCATATGACTTCATACAGAATGCAATATTTTCCCGCTTTCACGGAAAATGCCAAGACGTGACTACTGGAATC AATCCCATTGGATGTCCTAATCCCAGTTGCCCTGTCATCTGCGGCACACCTGGCTCTCTGGTTTATCATTATCCG GAACTCGAGGCGATCGTACACACGGCTGTCAAGGCTCTCTTGGTTCAAATCGTGAAACCCTCTTCTCCGGCATAT TCCAATTCTTCGTCCCGCATATATCAAGCTTATCACTCCAATAACATGGTTAGATCGTGGCTTCGATTTTCTCCT GCCCACGTTCCTGGAACATACGGGGTCTCGGATAGGCACACCCTAAACCAAAGTCTTTCGGGTGTCTTTCGTGAT ATTCCTTCTCTCCTTGACAATGAATGTGGTGGGCCACGGAAGGATGCACCTCATACTTTCCCCCGTTGCAGCTGG AAGAAAACTATGACCAAGTACATTCTCAGATTCCCATGA |
Transcript | >AgabiH97|111470 ATGGTTTATCCCGGGATTCTTATCTTTCTGACTCTGGCCATTTTCCAGTGGGCTCTGGCGTGTGAAACAGAGTGC AAGGATGGCGTCACCAATGTTTTCGTCGGTAACTACTCGAGCCCCGTTCACCAAGTCTTCCGCAAGCTCGGCGAA CGGCTATCTGACCGGCTTTCCCTCAACGAGGATCCTCAATATTACCTCCAACCGATCAATGATACCTTTCACAAG GAAGCATATGACTTCATACAGAATGCAATATTTTCCCGCTTTCACGGAAAATGCCAAGACGTGACTACTGGAATC AATCCCATTGGATGTCCTAATCCCAGTTGCCCTGTCATCTGCGGCACACCTGGCTCTCTGGTTTATCATTATCCG GAACTCGAGGCGATCGTACACACGGCTGTCAAGGCTCTCTTGGTTCAAATCGTGAAACCCTCTTCTCCGGCATAT TCCAATTCTTCGTCCCGCATATATCAAGCTTATCACTCCAATAACATGGTTAGATCGTGGCTTCGATTTTCTCCT GCCCACGTTCCTGGAACATACGGGGTCTCGGATAGGCACACCCTAAACCAAAGTCTTTCGGGTGTCTTTCGTGAT ATTCCTTCTCTCCTTGACAATGAATGTGGTGGGCCACGGAAGGATGCACCTCATACTTTCCCCCGTTGCAGCTGG AAGAAAACTATGACCAAGTACATTCTCAGATTCCCATGA |
Gene | >AgabiH97|111470 ATGGTTTATCCCGGGATTCTTATCTTTCTGACTCTGGCCATTTTCCAGTGGGCTCTGGCGTGTGAAACAGAGTGC AAGGATGGCGTCACCAATGTTTTCGTCGGTAACTACTCGAGCCCCGTTCACCAAGTCTTCCGCAAGCTCGTATGC CGCCTCTTTGGACTCTCGCTGGATTGACTTTGCTCAGAATGAATTTCATTATCAGGGCGAACGGCTATCTGACCG GCTTTCCCTCAACGAGGATCCTCAATATTACCTCCAACCGATCAATGATACCTTTCACAAGGAAGCATATGACTT CATACAGAATGCAATATTTTCCCGCTTTCACGGAAAATGCCAAGACGTGACTACTGGAATCAATCCCATTGGATG TCCTAATCCCAGTTGCCCTGTCATCTGCGGCACACCTGGCTCTCTGGTTTATCATTATCCGGAACTCGAGGCGAT CGTACACACGGCTGTCAAGGCTCTCTTGGTTCAAATCGTGAAACCCTCTTCTCCGGCATATTCCAATTCTTCGTC CCGCATATATCAAGCTTATCACTCCAATAACATGGTTAGATCGTGGCTTCGATTTTCTCCTGCCCACGTTCCTGG AACATACGGGGTCTCGGATAGGCACACCCTAAACCAAAGTCTTTCGGGTGTCTTTCGTGATATTCCTTCTCTCCT TGACAATGAATGTGGTGGGCCACGGAAGGATGCACCTCATACTTTCCCCCGTTGCAGCTGGAAGAAAACTATGAC CAAGTACATTCTCAGATTCCCATGA |