Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|111000
Gene name
Locationscaffold_8:1273284..1274285
Strand+
Gene length (bp)1001
Transcript length (bp)852
Coding sequence length (bp)852
Protein length (aa) 284

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05176 ATP-synt_10 ATP10 protein 2.0E-58 32 264

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P18496|ATP10_YEAST Mitochondrial ATPase complex subunit ATP10 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ATP10 PE=1 SV=2 26 259 3.0E-24
sp|Q6FWV2|ATP10_CANGA Mitochondrial ATPase complex subunit ATP10 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=ATP10 PE=3 SV=1 34 268 3.0E-22
sp|Q09836|ATP10_SCHPO Probable mitochondrial ATPase complex subunit atp10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=atp10 PE=3 SV=1 46 269 2.0E-19
sp|Q757F3|ATP10_ASHGO Mitochondrial ATPase complex subunit ATP10 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=ATP10 PE=3 SV=2 34 263 1.0E-18

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 13 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|111000
MSLLTWPVRTQTRAFSSSALRRNDPLSSIQGSDAPPTNTLPPLNRPLGVRERPTTLAKTTTARIKELMHTDALME
QRRHLVKEASVGYFHDVNMTRKHGGKTWIAPQVLIREDKALYLPNIAGKVLSDGSTKHTTEMCFGKTTILAMLNT
KVSEINVKGFIDPTHARYASHPLYQCVQVNLQENLLKSFLVNLFLRSLRRVTPKELHSTYLVSSQNMEYVRDALG
MTNARVGYVYLIDENLKIRWGGCADATKEETLALESCTGVLLKRLERKKEMEPHPSTQ*
Coding >AgabiH97|111000
ATGTCTTTGTTGACCTGGCCTGTGCGCACCCAAACACGCGCTTTCTCCTCCTCAGCCCTCCGCCGCAATGACCCC
CTGTCGTCCATCCAGGGTTCAGATGCCCCGCCCACCAACACCCTCCCGCCCCTCAACCGCCCCCTTGGGGTCCGA
GAACGCCCGACGACCCTCGCCAAGACCACCACCGCCCGCATCAAGGAGCTAATGCACACCGACGCACTGATGGAG
CAGCGGAGACATCTAGTAAAAGAAGCCAGTGTCGGCTATTTTCACGATGTGAATATGACTCGCAAACACGGCGGC
AAGACCTGGATAGCACCACAAGTGCTTATCCGTGAGGATAAAGCTCTCTATCTGCCCAACATCGCTGGCAAGGTC
CTCAGCGATGGGTCAACCAAGCACACCACCGAGATGTGCTTTGGCAAAACCACCATACTTGCCATGCTGAACACC
AAAGTTTCAGAGATAAATGTAAAGGGGTTCATTGACCCGACGCATGCGCGTTACGCCTCTCATCCACTGTATCAA
TGTGTGCAAGTGAACCTCCAGGAAAACCTTCTCAAGTCTTTCTTGGTCAATCTCTTCCTAAGGTCCCTGCGGCGG
GTGACGCCAAAGGAGCTGCACTCGACATACTTGGTGTCGAGCCAGAACATGGAATATGTACGAGATGCGCTCGGC
ATGACGAATGCACGAGTCGGCTATGTCTATCTGATTGATGAGAATCTCAAGATTCGGTGGGGCGGATGTGCAGAT
GCAACCAAGGAGGAAACACTAGCTCTGGAGAGCTGCACAGGTGTTCTACTCAAGCGACTGGAGCGCAAAAAAGAA
ATGGAACCACATCCATCGACTCAGTAG
Transcript >AgabiH97|111000
ATGTCTTTGTTGACCTGGCCTGTGCGCACCCAAACACGCGCTTTCTCCTCCTCAGCCCTCCGCCGCAATGACCCC
CTGTCGTCCATCCAGGGTTCAGATGCCCCGCCCACCAACACCCTCCCGCCCCTCAACCGCCCCCTTGGGGTCCGA
GAACGCCCGACGACCCTCGCCAAGACCACCACCGCCCGCATCAAGGAGCTAATGCACACCGACGCACTGATGGAG
CAGCGGAGACATCTAGTAAAAGAAGCCAGTGTCGGCTATTTTCACGATGTGAATATGACTCGCAAACACGGCGGC
AAGACCTGGATAGCACCACAAGTGCTTATCCGTGAGGATAAAGCTCTCTATCTGCCCAACATCGCTGGCAAGGTC
CTCAGCGATGGGTCAACCAAGCACACCACCGAGATGTGCTTTGGCAAAACCACCATACTTGCCATGCTGAACACC
AAAGTTTCAGAGATAAATGTAAAGGGGTTCATTGACCCGACGCATGCGCGTTACGCCTCTCATCCACTGTATCAA
TGTGTGCAAGTGAACCTCCAGGAAAACCTTCTCAAGTCTTTCTTGGTCAATCTCTTCCTAAGGTCCCTGCGGCGG
GTGACGCCAAAGGAGCTGCACTCGACATACTTGGTGTCGAGCCAGAACATGGAATATGTACGAGATGCGCTCGGC
ATGACGAATGCACGAGTCGGCTATGTCTATCTGATTGATGAGAATCTCAAGATTCGGTGGGGCGGATGTGCAGAT
GCAACCAAGGAGGAAACACTAGCTCTGGAGAGCTGCACAGGTGTTCTACTCAAGCGACTGGAGCGCAAAAAAGAA
ATGGAACCACATCCATCGACTCAGTAG
Gene >AgabiH97|111000
ATGTCTTTGTTGACCTGGCCTGTGCGCACCCAAACACGCGCTTTCTCCTCCTCAGCCCTCCGCCGCAATGACCCC
CTGTCGTCCATCCAGGGTTCAGATGCCCCGCCCACCAACACCCTCCCGCCCCTCAACCGCCCCCTTGGGGTCCGA
GAACGCCCGACGACCCTCGCCAAGACCACCACCGCCCGCATCAAGGAGCTAATGCACACCGACGCACTGATGGAG
CAGCGGAGACATCTGTTCGTTACTGTAGTATCTCTACTCGCATGTACATTGACCGTCGTCGTCGTTAGAGTAAAA
GAAGCCAGTGTCGGCTATTTTCACGATGTGAATATGACTCGCAAACACGGCGGCAAGACCTGGATAGCACCACAA
GTGCTTATCCGTGAGGATGTAAGTCTCGCTCATGTGTGCTAGCGCCGATTCCGACTGTCTTCAGAAAGCTCTCTA
TCTGCCCAACATCGCTGGCAAGGTCCTCAGCGATGGGTCAACCAAGCACACCACCGAGATGTGCTTTGGCAAAAC
CACCATACTTGCCATGCTGAACACCAAAGTTTCAGAGGTAGCCTTTTGTTTCTCTCGACAAGTGTTGACGCTGAC
CCGGCTCTTAGATAAATGTAAAGGGGTTCATTGACCCGACGCATGCGCGTTACGCCTCTCATCCACTGTATCAAT
GTGTGCAAGTGAACCTCCAGGAAAACCTTCTCAAGTCTTTCTTGGTCAATCTCTTCCTAAGGTCCCTGCGGCGGG
TGACGCCAAAGGAGCTGCACTCGACATACTTGGTGTCGAGCCAGAACATGGAATATGTACGAGATGCGCTCGGCA
TGACGAATGCACGAGTCGGCTATGTCTATCTGATTGATGAGAATCTCAAGATTCGGTGGGGCGGATGTGCAGATG
CAACCAAGGAGGAAACACTAGCTCTGGAGAGCTGCACAGGTGTTCTACTCAAGCGACTGGAGCGCAAAAAAGAAA
TGGAACCACATCCATCGACTCAGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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