Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|110820
Gene name
Locationscaffold_8:1222882..1224635
Strand+
Gene length (bp)1753
Transcript length (bp)1536
Coding sequence length (bp)1536
Protein length (aa) 512

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF19086 Terpene_syn_C_2 Terpene synthase family 2, C-terminal metal binding 7.3E-51 83 273

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|A8NE23|COP3_COPC7 Alpha-muurolene synthase OS=Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) GN=COP3 PE=1 SV=1 9 334 7.0E-122
sp|A8NU13|COP4_COPC7 Linoleate 10R-lipoxygenase COP4 OS=Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) GN=COP4 PE=1 SV=1 9 335 5.0E-56
sp|P0DL13|PRO1_ARMGA Delta(6)-protoilludene synthase OS=Armillaria gallica GN=PRO1 PE=1 SV=1 11 335 5.0E-43
sp|B2J4A4|GERAS_NOSP7 Germacrene A synthase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=Npun_R3832 PE=1 SV=1 21 317 5.0E-36
sp|Q6WP50|BOT2_BOTFU Presilphiperfolan-8-beta-ol synthase OS=Botryotinia fuckeliana GN=BOT2 PE=1 SV=1 131 335 1.0E-29
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|A8NE23|COP3_COPC7 Alpha-muurolene synthase OS=Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) GN=COP3 PE=1 SV=1 9 334 7.0E-122
sp|A8NU13|COP4_COPC7 Linoleate 10R-lipoxygenase COP4 OS=Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) GN=COP4 PE=1 SV=1 9 335 5.0E-56
sp|P0DL13|PRO1_ARMGA Delta(6)-protoilludene synthase OS=Armillaria gallica GN=PRO1 PE=1 SV=1 11 335 5.0E-43
sp|B2J4A4|GERAS_NOSP7 Germacrene A synthase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=Npun_R3832 PE=1 SV=1 21 317 5.0E-36
sp|Q6WP50|BOT2_BOTFU Presilphiperfolan-8-beta-ol synthase OS=Botryotinia fuckeliana GN=BOT2 PE=1 SV=1 131 335 1.0E-29
sp|D8RLD3|MTS17_SELML (+)-germacrene D synthase OS=Selaginella moellendorffii GN=SELMODRAFT_412756 PE=1 SV=1 63 319 2.0E-22
sp|J9R1J8|MTS1_SELML Microbial Terpene synthase-like protein 1 OS=Selaginella moellendorffii GN=SELMODRAFT_402353 PE=1 SV=2 63 319 5.0E-19
sp|J9R393|MTS13_SELML Microbial Terpene synthase-like protein 13 OS=Selaginella moellendorffii GN=SELMODRAFT_412537 PE=2 SV=2 22 319 2.0E-16
sp|B5GS26|DCADS_STRC2 (-)-delta-cadinene synthase OS=Streptomyces clavuligerus (strain ATCC 27064 / DSM 738 / JCM 4710 / NBRC 13307 / NCIMB 12785 / NRRL 3585 / VKM Ac-602) GN=SCreLAV_p0328 PE=1 SV=1 63 317 1.0E-15
sp|Q82RR7|TPC1_STRAW Avermitilol synthase OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680) GN=tpc1 PE=1 SV=1 133 320 2.0E-15
sp|Q9X839|CYC2_STRCO Germacradienol/geosmin synthase OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) GN=cyc2 PE=1 SV=3 27 365 6.0E-14
sp|J9QS25|MTS26_SELML (E)-2-epi-beta-caryophyllene synthase OS=Selaginella moellendorffii GN=SELMODRAFT_414574 PE=1 SV=2 34 319 1.0E-12
sp|Q82IY4|PTLA_STRAW Pentalenene synthase OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680) GN=ptlA PE=1 SV=1 65 317 3.0E-12
sp|B1W019|GCOA_STRGG (+)-caryolan-1-ol synthase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=gcoA PE=1 SV=1 64 280 6.0E-12
sp|Q55012|PENA_STREX Pentalenene synthase OS=Streptomyces exfoliatus GN=penA PE=1 SV=4 50 286 2.0E-10
sp|E3VWJ0|PNTA_STRAE Pentalenene synthase OS=Streptomyces arenae GN=pntA PE=3 SV=1 65 322 5.0E-10
sp|Q9K499|CYC1_STRCO Epi-isozizaene synthase OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) GN=cyc1 PE=1 SV=1 39 317 2.0E-09
sp|B5GW45|TMUUS_STRC2 (+)-T-muurolol synthase OS=Streptomyces clavuligerus (strain ATCC 27064 / DSM 738 / JCM 4710 / NBRC 13307 / NCIMB 12785 / NRRL 3585 / VKM Ac-602) GN=SCLAV_p0068 PE=1 SV=1 50 366 4.0E-08
sp|D8S255|MTS30_SELML Microbial Terpene synthase-like protein 30 OS=Selaginella moellendorffii GN=SELMODRAFT_417418 PE=2 SV=1 38 321 2.0E-06
[Show less]

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

Domain # Start End Length
1 474 496 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|110820
MAFAVASLSPKSFILPDLVSHCDFKLRISRHRKQVTVETKKWLFQGDSLDANKRKAFHGLNAGLLTAMTYPNAAC
PQLRVCNDFLTFLFHLDNLSDDMDNRGTHNIADVVLNSLYFPYSYPSTARIGRMTKHLYKRVIPTSSPGTQQRFI
ETMDFFFQSVTQQALDRANGVIPDLDSYIALRRDTSGCKPCWALIEYANNLKIPDEVMDHPTILALGEAANDLVT
WSNDIFSYNVEQSKGDTHNMIPVVMYQKDLSLQEAVDFVGQMCKSSIDRFKAERDNLPSWGPHIDRQVNVYVQGL
ADWIVGSLHWSFESTRYFGSNGRKIKSTRVVELLPLRQEARARAATVTLRPTLSPITVPPRAPSPATPTESEPVT
PSSSVHSIPVPKSANSEESIPHSPWSVQRSQDVIVSPIPNSPKPTLGRIQTESLFVSETQEQTPESGVLVQYPEI
LSPAMANPLVNQRIVRNEPLGLYSLTIWLFYTLIYAPTMTLLRVFLNQDVHPHPLCHYGYL*
Coding >AgabiH97|110820
ATGGCTTTTGCAGTCGCTTCCTTGTCCCCCAAGTCTTTTATTCTTCCTGATCTCGTGTCCCATTGTGACTTCAAA
CTACGAATCAGCCGACATAGGAAGCAGGTCACCGTTGAGACGAAGAAATGGCTTTTTCAAGGGGATAGCCTTGAC
GCAAATAAACGCAAGGCCTTCCATGGGCTCAATGCTGGTTTACTGACCGCAATGACCTATCCCAATGCTGCTTGC
CCCCAGTTGAGAGTTTGCAATGATTTCCTCACTTTTTTATTCCATCTCGACAACCTTTCCGATGATATGGACAAC
CGAGGAACACACAACATTGCCGATGTCGTGTTGAACTCTCTTTATTTCCCTTACTCTTACCCTTCCACCGCCCGC
ATTGGGAGGATGACCAAACATCTATACAAACGAGTGATCCCGACCTCGTCTCCTGGAACGCAGCAACGTTTCATT
GAAACAATGGATTTCTTTTTCCAGAGCGTAACCCAACAAGCTCTGGATCGCGCTAATGGTGTAATACCCGATCTT
GACTCATATATCGCTCTACGTCGGGATACTTCCGGATGCAAACCGTGCTGGGCTTTAATTGAGTATGCAAACAAT
CTTAAAATTCCCGATGAAGTGATGGATCATCCCACCATCCTCGCCCTCGGTGAGGCTGCCAACGACCTTGTCACA
TGGTCTAATGATATCTTCTCCTATAACGTAGAACAGTCGAAGGGCGACACGCACAATATGATTCCGGTCGTTATG
TATCAGAAGGATCTCAGCCTCCAGGAAGCCGTGGACTTTGTCGGTCAAATGTGCAAGTCGAGTATCGACCGTTTC
AAGGCGGAGAGGGATAATCTTCCTTCCTGGGGACCACACATCGACCGGCAAGTGAATGTTTACGTTCAAGGCCTG
GCCGATTGGATTGTTGGTTCGTTGCATTGGTCATTCGAATCAACAAGATATTTTGGGTCAAATGGACGCAAGATC
AAGTCAACCCGTGTTGTTGAACTCCTTCCTCTGCGCCAAGAAGCTAGGGCAAGGGCGGCAACTGTCACTTTGCGT
CCCACCCTCTCGCCAATCACGGTCCCCCCTCGGGCTCCAAGTCCCGCTACCCCAACGGAATCGGAACCGGTCACG
CCCTCCAGCAGCGTTCACAGCATCCCTGTACCCAAATCAGCCAATTCAGAGGAGTCTATTCCTCACTCACCTTGG
TCTGTTCAGCGTTCTCAAGACGTCATTGTCAGTCCAATCCCCAACTCACCCAAACCAACTCTTGGGCGTATTCAA
ACCGAGTCGCTTTTCGTGTCAGAGACTCAAGAGCAGACACCGGAGAGTGGAGTGCTCGTACAATATCCAGAAATT
CTTTCTCCAGCAATGGCCAATCCTTTGGTGAACCAGAGAATCGTCAGGAACGAACCTCTCGGCCTCTACTCACTT
ACCATTTGGCTATTCTACACTTTGATCTATGCGCCTACTATGACGCTTCTTCGTGTTTTCCTTAATCAAGATGTG
CATCCACATCCTCTCTGTCACTACGGGTATCTGTAA
Transcript >AgabiH97|110820
ATGGCTTTTGCAGTCGCTTCCTTGTCCCCCAAGTCTTTTATTCTTCCTGATCTCGTGTCCCATTGTGACTTCAAA
CTACGAATCAGCCGACATAGGAAGCAGGTCACCGTTGAGACGAAGAAATGGCTTTTTCAAGGGGATAGCCTTGAC
GCAAATAAACGCAAGGCCTTCCATGGGCTCAATGCTGGTTTACTGACCGCAATGACCTATCCCAATGCTGCTTGC
CCCCAGTTGAGAGTTTGCAATGATTTCCTCACTTTTTTATTCCATCTCGACAACCTTTCCGATGATATGGACAAC
CGAGGAACACACAACATTGCCGATGTCGTGTTGAACTCTCTTTATTTCCCTTACTCTTACCCTTCCACCGCCCGC
ATTGGGAGGATGACCAAACATCTATACAAACGAGTGATCCCGACCTCGTCTCCTGGAACGCAGCAACGTTTCATT
GAAACAATGGATTTCTTTTTCCAGAGCGTAACCCAACAAGCTCTGGATCGCGCTAATGGTGTAATACCCGATCTT
GACTCATATATCGCTCTACGTCGGGATACTTCCGGATGCAAACCGTGCTGGGCTTTAATTGAGTATGCAAACAAT
CTTAAAATTCCCGATGAAGTGATGGATCATCCCACCATCCTCGCCCTCGGTGAGGCTGCCAACGACCTTGTCACA
TGGTCTAATGATATCTTCTCCTATAACGTAGAACAGTCGAAGGGCGACACGCACAATATGATTCCGGTCGTTATG
TATCAGAAGGATCTCAGCCTCCAGGAAGCCGTGGACTTTGTCGGTCAAATGTGCAAGTCGAGTATCGACCGTTTC
AAGGCGGAGAGGGATAATCTTCCTTCCTGGGGACCACACATCGACCGGCAAGTGAATGTTTACGTTCAAGGCCTG
GCCGATTGGATTGTTGGTTCGTTGCATTGGTCATTCGAATCAACAAGATATTTTGGGTCAAATGGACGCAAGATC
AAGTCAACCCGTGTTGTTGAACTCCTTCCTCTGCGCCAAGAAGCTAGGGCAAGGGCGGCAACTGTCACTTTGCGT
CCCACCCTCTCGCCAATCACGGTCCCCCCTCGGGCTCCAAGTCCCGCTACCCCAACGGAATCGGAACCGGTCACG
CCCTCCAGCAGCGTTCACAGCATCCCTGTACCCAAATCAGCCAATTCAGAGGAGTCTATTCCTCACTCACCTTGG
TCTGTTCAGCGTTCTCAAGACGTCATTGTCAGTCCAATCCCCAACTCACCCAAACCAACTCTTGGGCGTATTCAA
ACCGAGTCGCTTTTCGTGTCAGAGACTCAAGAGCAGACACCGGAGAGTGGAGTGCTCGTACAATATCCAGAAATT
CTTTCTCCAGCAATGGCCAATCCTTTGGTGAACCAGAGAATCGTCAGGAACGAACCTCTCGGCCTCTACTCACTT
ACCATTTGGCTATTCTACACTTTGATCTATGCGCCTACTATGACGCTTCTTCGTGTTTTCCTTAATCAAGATGTG
CATCCACATCCTCTCTGTCACTACGGGTATCTGTAA
Gene >AgabiH97|110820
ATGGCTTTTGCAGTCGCTTCCTTGTCCCCCAAGTCTTTTATTCTTCCTGATCTCGTGTCCCATTGTGACTTCAAA
CTACGAATCAGCCGACATAGGAAGCAGGTCACCGTTGAGACGAAGAAATGGCTTTTTCAAGGGGATAGCCTTGAC
GCAAATAAACGCAAGGCCTTCCATGGGCTCAATGCTGGTTTACTGACCGCAATGACCTATCCCAATGCTGCTTGC
CCCCAGTTGAGAGTTTGCAATGATTTCCTCACTTTTTTATTCCATCTCGACAACCTTTCCGATGATATGGACAAC
CGAGGAACACACAACATTGCCGATGTCGTGTTGAACTCTCTTTATTTCCCTTACTCTTACCCTTCCACCGCCCGC
ATTGGGAGGATGACCAAACAGTATGTGCTTTGCCTTTCTTGATATTATTTCCACCGAGCTGACCCTCTCGCAGTC
TATACAAACGAGTGATCCCGACCTCGTCTCCTGGAACGCAGCAACGTTTCATTGAAACAATGGATTTCTTTTTCC
AGAGCGTAACCCAACAAGCTCTGGATCGCGCTAATGGTGTAATACCCGATCTTGACTCATATATCGCTCTACGTC
GGGATACTTCCGGATGCAAACCGTGCTGGGCTTTAATTGAGTGTAAGTTGACCCTCTAAAGCTTTCAAGACGTGG
TGCTGACGGCCCTGATAGATGCAAACAATCTTAAAATTCCCGATGAAGTGATGGATCATCCCACCATCCTCGCCC
TCGGTGAGGCTGCCAACGACCTTGTCACATGGTCTAATGTAAGTCTAAAATAACTTCAATGGCTGACAATCTAGA
CTAATTGTTCCGCGCCTTTTAGGATATCTTCTCCTATAACGTAGAACAGTCGAAGGGCGACACGCACAATATGAT
TCCGGTCGTTATGTATCAGAAGGATCTCAGCCTCCAGGAAGCCGTGGACTTTGTCGGTCAAATGTGCAAGTCGAG
TATCGACCGTTTCAAGGCGGAGAGGGATAATCTTCCTTCCTGGGGACCACACATCGACCGGCAAGTGAATGTTTA
CGTTCAAGGCCTGGCCGATTGGATTGTTGGTTCGTTGCATTGGTCATTCGAATCAACAAGATATTTTGGGTCAAA
TGGACGCAAGATCAAGTCAACCCGTGTTGTTGAACTCCTTCCTCTGCGCCAAGAAGCTAGGGTAAGCATATCTGT
TTGCTGCGATGCCATTAGCGTTGATCTGACGTTCGCTAAGGCAAGGGCGGCAACTGTCACTTTGCGTCCCACCCT
CTCGCCAATCACGGTCCCCCCTCGGGCTCCAAGTCCCGCTACCCCAACGGAATCGGAACCGGTCACGCCCTCCAG
CAGCGTTCACAGCATCCCTGTACCCAAATCAGCCAATTCAGAGGAGTCTATTCCTCACTCACCTTGGTCTGTTCA
GCGTTCTCAAGACGTCATTGTCAGTCCAATCCCCAACTCACCCAAACCAACTCTTGGGCGTATTCAAACCGAGTC
GCTTTTCGTGTCAGAGACTCAAGAGCAGACACCGGAGAGTGGAGTGCTCGTACAATATCCAGAAATTCTTTCTCC
AGCAATGGCCAATCCTTTGGTGAACCAGAGAATCGTCAGGAACGAACCTCTCGGCCTCTACTCACTTACCATTTG
GCTATTCTACACTTTGATCTATGCGCCTACTATGACGCTTCTTCGTGTTTTCCTTAATCAAGATGTGCATCCACA
TCCTCTCTGTCACTACGGGTATCTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail