Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|109740
Gene name
Locationscaffold_8:893409..894676
Strand-
Gene length (bp)1267
Transcript length (bp)1089
Coding sequence length (bp)1089
Protein length (aa) 363

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07859 Abhydrolase_3 alpha/beta hydrolase fold 1.1E-19 115 333
PF10340 Say1_Mug180 Steryl acetyl hydrolase 2.9E-15 111 338
PF20434 BD-FAE BD-FAE 1.4E-06 113 200

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P18773|EST_ACILW Esterase OS=Acinetobacter lwoffii GN=est PE=3 SV=2 113 333 6.0E-10
sp|Q9HDV1|MU180_SCHPO Putative steryl acetyl hydrolase mug81 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mug180 PE=1 SV=1 107 355 2.0E-09
sp|P24484|LIP2_MORS1 Lipase 2 OS=Moraxella sp. (strain TA144) GN=lip2 PE=1 SV=1 112 212 2.0E-09
sp|O14158|YE76_SCHPO AB hydrolase superfamily protein C4A8.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC4A8.06c PE=3 SV=1 110 261 5.0E-06
sp|Q9EX73|MLHB_RHOER Monoterpene epsilon-lactone hydrolase OS=Rhodococcus erythropolis GN=mlhB PE=1 SV=1 61 238 8.0E-06

GO

GO Term Description Terminal node
GO:0016787 hydrolase activity Yes
GO:0003824 catalytic activity No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 24 0.5

Transmembrane Domains

Domain # Start End Length
1 23 42 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
Casing Casing mycelium 81.66 43.71 119.61
Initials Initials knots 53.90 31.57 76.23
Pileal_Stipeal_center Stage I stipe center 89.88 53.04 126.72
Pileal_Stipeal_shell Stage I stipe shell 127.91 76.77 179.05
DIF_stipe_center Stage II stipe center 57.83 34.04 81.62
DIF_stipe_shell Stage II stipe shell 53.31 31.24 75.38
DIF_stipe_skin Stage II stipe skin 90.22 53.62 126.81
DIF_cap_skin Stage II cap skin 121.68 71.84 171.52
DIF_cap_tissue Stage II cap tissue 64.91 38.05 91.77
DIF_gill_tissue Stage II gill tissue 54.74 31.01 78.46
YFB_stipe_center Young fruiting body stipe center 78.92 47.06 110.77
YFB_stipe_shell Young fruiting body stipe shell 64.51 38.18 90.83
YFB_stipe_skin Young fruiting body stipe skin 70.92 41.44 100.41
YFB_cap_skin Young fruiting body cap skin 132.94 79.24 186.64
YFB_cap_tissue Young fruiting body cap tissue 11.29 4.28 18.30
YFB_gill_tissue Young fruiting body gill tissue 161.55 85.68 237.42
YFB_veil Young fruiting body veil 82.97 47.19 118.74

Differential expression

Label1 Label2 Q-value Significant difference
Casing DIF_gill_tissue 0.222255 no
Casing YFB_stipe_center 0.951940 no
Casing YFB_stipe_shell 0.534900 no
Casing YFB_stipe_skin 0.754982 no
Casing YFB_cap_skin 0.100411 no
Casing YFB_cap_tissue 0.000613 yes
Casing YFB_gill_tissue 0.031088 yes
Casing YFB_veil 0.978822 no
Casing Initials 0.182929 no
Casing Pileal_Stipeal_center 0.851056 no
Casing Pileal_Stipeal_shell 0.130530 no
Casing DIF_stipe_center 0.294650 no
Casing DIF_stipe_shell 0.170099 no
Casing DIF_stipe_skin 0.838246 no
Casing DIF_cap_skin 0.209955 no
Casing DIF_cap_tissue 0.545260 no
DIF_gill_tissue YFB_stipe_center 0.246599 no
DIF_gill_tissue YFB_stipe_shell 0.700286 no
DIF_gill_tissue YFB_stipe_skin 0.476043 no
DIF_gill_tissue YFB_cap_skin 0.000613 yes
DIF_gill_tissue YFB_cap_tissue 0.000613 yes
DIF_gill_tissue YFB_gill_tissue 0.000613 yes
DIF_gill_tissue YFB_veil 0.180324 no
YFB_stipe_center YFB_stipe_shell 0.594119 no
YFB_stipe_center YFB_stipe_skin 0.817971 no
YFB_stipe_center YFB_cap_skin 0.055979 no
YFB_stipe_center YFB_cap_tissue 0.000613 yes
YFB_stipe_center YFB_gill_tissue 0.021322 yes
YFB_stipe_center YFB_veil 0.924712 no
YFB_stipe_shell YFB_stipe_skin 0.841253 no
YFB_stipe_shell YFB_cap_skin 0.002084 yes
YFB_stipe_shell YFB_cap_tissue 0.000613 yes
YFB_stipe_shell YFB_gill_tissue 0.001140 yes
YFB_stipe_shell YFB_veil 0.476917 no
YFB_stipe_skin YFB_cap_skin 0.016104 yes
YFB_stipe_skin YFB_cap_tissue 0.000613 yes
YFB_stipe_skin YFB_gill_tissue 0.007092 yes
YFB_stipe_skin YFB_veil 0.714386 no
YFB_cap_skin YFB_cap_tissue 0.000613 yes
YFB_cap_skin YFB_gill_tissue 0.646717 no
YFB_cap_skin YFB_veil 0.100731 no
YFB_cap_tissue YFB_gill_tissue 0.000613 yes
YFB_cap_tissue YFB_veil 0.000613 yes
YFB_gill_tissue YFB_veil 0.025963 yes
Initials DIF_gill_tissue 0.979951 no
Initials YFB_stipe_center 0.212262 no
Initials YFB_stipe_shell 0.655184 no
Initials YFB_stipe_skin 0.428811 no
Initials YFB_cap_skin 0.000613 yes
Initials YFB_cap_tissue 0.000613 yes
Initials YFB_gill_tissue 0.000613 yes
Initials YFB_veil 0.150034 no
Initials Pileal_Stipeal_center 0.068270 no
Initials Pileal_Stipeal_shell 0.000613 yes
Initials DIF_stipe_center 0.888882 no
Initials DIF_stipe_shell 0.985425 no
Initials DIF_stipe_skin 0.058732 no
Initials DIF_cap_skin 0.000613 yes
Initials DIF_cap_tissue 0.637053 no
Pileal_Stipeal_center DIF_gill_tissue 0.085561 no
Pileal_Stipeal_center YFB_stipe_center 0.766987 no
Pileal_Stipeal_center YFB_stipe_shell 0.294143 no
Pileal_Stipeal_center YFB_stipe_skin 0.509529 no
Pileal_Stipeal_center YFB_cap_skin 0.186066 no
Pileal_Stipeal_center YFB_cap_tissue 0.000613 yes
Pileal_Stipeal_center YFB_gill_tissue 0.059906 no
Pileal_Stipeal_center YFB_veil 0.872145 no
Pileal_Stipeal_center Pileal_Stipeal_shell 0.238319 no
Pileal_Stipeal_center DIF_stipe_center 0.124266 no
Pileal_Stipeal_center DIF_stipe_shell 0.058542 no
Pileal_Stipeal_center DIF_stipe_skin 0.993836 no
Pileal_Stipeal_center DIF_cap_skin 0.356035 no
Pileal_Stipeal_center DIF_cap_tissue 0.306903 no
Pileal_Stipeal_shell DIF_gill_tissue 0.002084 yes
Pileal_Stipeal_shell YFB_stipe_center 0.078944 no
Pileal_Stipeal_shell YFB_stipe_shell 0.005671 yes
Pileal_Stipeal_shell YFB_stipe_skin 0.026215 yes
Pileal_Stipeal_shell YFB_cap_skin 0.943502 no
Pileal_Stipeal_shell YFB_cap_tissue 0.000613 yes
Pileal_Stipeal_shell YFB_gill_tissue 0.549426 no
Pileal_Stipeal_shell YFB_veil 0.133711 no
Pileal_Stipeal_shell DIF_stipe_center 0.001140 yes
Pileal_Stipeal_shell DIF_stipe_shell 0.000613 yes
Pileal_Stipeal_shell DIF_stipe_skin 0.242880 no
Pileal_Stipeal_shell DIF_cap_skin 0.926881 no
Pileal_Stipeal_shell DIF_cap_tissue 0.008121 yes
DIF_stipe_center DIF_gill_tissue 0.917520 no
DIF_stipe_center YFB_stipe_center 0.334972 no
DIF_stipe_center YFB_stipe_shell 0.811661 no
DIF_stipe_center YFB_stipe_skin 0.590308 no
DIF_stipe_center YFB_cap_skin 0.000613 yes
DIF_stipe_center YFB_cap_tissue 0.000613 yes
DIF_stipe_center YFB_gill_tissue 0.000613 yes
DIF_stipe_center YFB_veil 0.238427 no
DIF_stipe_center DIF_stipe_shell 0.870506 no
DIF_stipe_center DIF_stipe_skin 0.106659 no
DIF_stipe_center DIF_cap_skin 0.003765 yes
DIF_stipe_center DIF_cap_tissue 0.794716 no
DIF_stipe_shell DIF_gill_tissue 0.963594 no
DIF_stipe_shell YFB_stipe_center 0.194842 no
DIF_stipe_shell YFB_stipe_shell 0.627575 no
DIF_stipe_shell YFB_stipe_skin 0.398608 no
DIF_stipe_shell YFB_cap_skin 0.000613 yes
DIF_stipe_shell YFB_cap_tissue 0.000613 yes
DIF_stipe_shell YFB_gill_tissue 0.000613 yes
DIF_stipe_shell YFB_veil 0.134423 no
DIF_stipe_shell DIF_stipe_skin 0.052948 no
DIF_stipe_shell DIF_cap_skin 0.000613 yes
DIF_stipe_shell DIF_cap_tissue 0.608653 no
DIF_stipe_skin DIF_gill_tissue 0.077343 no
DIF_stipe_skin YFB_stipe_center 0.756140 no
DIF_stipe_skin YFB_stipe_shell 0.282209 no
DIF_stipe_skin YFB_stipe_skin 0.498118 no
DIF_stipe_skin YFB_cap_skin 0.187053 no
DIF_stipe_skin YFB_cap_tissue 0.000613 yes
DIF_stipe_skin YFB_gill_tissue 0.061662 no
DIF_stipe_skin YFB_veil 0.863814 no
DIF_stipe_skin DIF_cap_skin 0.362309 no
DIF_stipe_skin DIF_cap_tissue 0.294241 no
DIF_cap_skin DIF_gill_tissue 0.002951 yes
DIF_cap_skin YFB_stipe_center 0.135743 no
DIF_cap_skin YFB_stipe_shell 0.016949 yes
DIF_cap_skin YFB_stipe_skin 0.053358 no
DIF_cap_skin YFB_cap_skin 0.859544 no
DIF_cap_skin YFB_cap_tissue 0.000613 yes
DIF_cap_skin YFB_gill_tissue 0.454694 no
DIF_cap_skin YFB_veil 0.217865 no
DIF_cap_skin DIF_cap_tissue 0.018624 yes
DIF_cap_tissue DIF_gill_tissue 0.689083 no
DIF_cap_tissue YFB_stipe_center 0.616140 no
DIF_cap_tissue YFB_stipe_shell 0.990512 no
DIF_cap_tissue YFB_stipe_skin 0.857375 no
DIF_cap_tissue YFB_cap_skin 0.003765 yes
DIF_cap_tissue YFB_cap_tissue 0.000613 yes
DIF_cap_tissue YFB_gill_tissue 0.001140 yes
DIF_cap_tissue YFB_veil 0.502008 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|109740
MPESSQEILRANQYGRPSFIDKIGLFSKLAVLPVVLVWSYLFKWSGRTRKRSLRDGLTRFLLTKLNIRQCQHVIG
TTKATYNAWCKQVKQEPHIEAIGEGANLLWVGERRLEKVILVFHGGAFLLPPIDTHVKFWARVGAKLGERGINVS
LAMLEYTLVPAAAFPTQLKQAVAAINHLTSLGVKPQDIQLAGDSAGANLILQVLSHLLHPLEYKNVPALSLAAPL
KGAYLMSPWVDLSDIHGTFKSGDPTDILTTGTLRYWGTEILRPVPKEYLGYVEANSAGDDWWKGVDALVDRVLIT
AGREECLKDEIIRFNAVFENFHAHVKMEEHDGVHDDPLFAVELGESGEGAPDMIIDWFRAGY*
Coding >AgabiH97|109740
ATGCCAGAAAGCTCCCAGGAGATATTGCGAGCAAACCAGTACGGCCGCCCCTCCTTCATTGATAAAATCGGATTA
TTCTCCAAACTTGCTGTCCTTCCCGTCGTATTGGTTTGGTCATATCTCTTCAAATGGAGTGGTAGGACCAGAAAG
CGCAGCCTTCGTGATGGCCTTACTCGATTCTTACTCACCAAGCTCAACATCCGACAATGCCAACACGTTATCGGA
ACAACCAAAGCAACCTATAATGCCTGGTGCAAGCAGGTCAAACAAGAGCCTCACATCGAGGCAATCGGTGAAGGT
GCAAATCTTCTCTGGGTCGGTGAACGGAGACTGGAAAAGGTCATTTTAGTTTTTCATGGGGGCGCTTTCTTGCTG
CCTCCCATTGACACTCACGTGAAGTTCTGGGCCCGTGTCGGCGCCAAACTTGGCGAGCGCGGCATCAATGTATCT
TTAGCTATGCTTGAGTACACTCTCGTCCCTGCCGCTGCTTTCCCAACCCAACTCAAACAAGCGGTGGCTGCCATC
AATCACCTCACGAGCCTTGGGGTTAAACCACAAGATATTCAATTGGCGGGTGATTCGGCTGGTGCGAACTTGATC
CTTCAAGTTCTTTCCCACCTCTTGCACCCTCTGGAGTACAAAAATGTACCAGCTCTATCTCTTGCTGCACCTTTA
AAAGGTGCATACTTGATGTCTCCTTGGGTGGATCTCTCGGATATACACGGAACATTCAAGAGCGGTGATCCCACC
GACATACTGACTACTGGCACTCTGCGTTACTGGGGTACAGAGATTCTCAGACCTGTGCCAAAAGAGTACCTCGGT
TACGTCGAAGCCAACAGTGCAGGGGATGATTGGTGGAAAGGTGTCGATGCCTTGGTTGATCGTGTTCTTATCACG
GCAGGTCGGGAAGAATGTCTCAAGGATGAGATTATTCGTTTTAACGCTGTATTCGAGAACTTCCATGCTCACGTC
AAAATGGAGGAACATGATGGTGTACACGACGACCCGCTTTTTGCAGTGGAACTTGGGGAATCAGGTGAAGGTGCA
CCAGATATGATCATTGACTGGTTCCGAGCCGGTTACTGA
Transcript >AgabiH97|109740
ATGCCAGAAAGCTCCCAGGAGATATTGCGAGCAAACCAGTACGGCCGCCCCTCCTTCATTGATAAAATCGGATTA
TTCTCCAAACTTGCTGTCCTTCCCGTCGTATTGGTTTGGTCATATCTCTTCAAATGGAGTGGTAGGACCAGAAAG
CGCAGCCTTCGTGATGGCCTTACTCGATTCTTACTCACCAAGCTCAACATCCGACAATGCCAACACGTTATCGGA
ACAACCAAAGCAACCTATAATGCCTGGTGCAAGCAGGTCAAACAAGAGCCTCACATCGAGGCAATCGGTGAAGGT
GCAAATCTTCTCTGGGTCGGTGAACGGAGACTGGAAAAGGTCATTTTAGTTTTTCATGGGGGCGCTTTCTTGCTG
CCTCCCATTGACACTCACGTGAAGTTCTGGGCCCGTGTCGGCGCCAAACTTGGCGAGCGCGGCATCAATGTATCT
TTAGCTATGCTTGAGTACACTCTCGTCCCTGCCGCTGCTTTCCCAACCCAACTCAAACAAGCGGTGGCTGCCATC
AATCACCTCACGAGCCTTGGGGTTAAACCACAAGATATTCAATTGGCGGGTGATTCGGCTGGTGCGAACTTGATC
CTTCAAGTTCTTTCCCACCTCTTGCACCCTCTGGAGTACAAAAATGTACCAGCTCTATCTCTTGCTGCACCTTTA
AAAGGTGCATACTTGATGTCTCCTTGGGTGGATCTCTCGGATATACACGGAACATTCAAGAGCGGTGATCCCACC
GACATACTGACTACTGGCACTCTGCGTTACTGGGGTACAGAGATTCTCAGACCTGTGCCAAAAGAGTACCTCGGT
TACGTCGAAGCCAACAGTGCAGGGGATGATTGGTGGAAAGGTGTCGATGCCTTGGTTGATCGTGTTCTTATCACG
GCAGGTCGGGAAGAATGTCTCAAGGATGAGATTATTCGTTTTAACGCTGTATTCGAGAACTTCCATGCTCACGTC
AAAATGGAGGAACATGATGGTGTACACGACGACCCGCTTTTTGCAGTGGAACTTGGGGAATCAGGTGAAGGTGCA
CCAGATATGATCATTGACTGGTTCCGAGCCGGTTACTGA
Gene >AgabiH97|109740
ATGCCAGAAAGCTCCCAGGAGATATTGCGAGCAAACCAGTACGGCCGCCCCTCCTTCATTGATAAAATCGGATTA
TTCTCCAAACTTGCTGTCCTTCGTGAGTGCAGTATTTCTACCAGTGTCTGCTGGGAAGCTAACGTGACTTTTTCC
GGGGCAGCCGTCGTATTGGTTTGGTCATATCTCTTCAAATGGAGTGGTAGGACCAGAAAGCGCAGCCTTCGTGAT
GGCCTTACTCGATTCTTACTCACCAAGCTCAACATCCGACAATGCCAACACGTTATCGGAACAACCAAAGCAACC
TATAATGCCTGGTGCAAGCAGGTCAAACAAGAGCCTCACATCGAGGCAATCGGTGAAGGTGCAAATCTTCTCTGG
GTCGGTGAACGGAGACTGGAAAAGGTCATTTTAGTTTTTCATGGTGAGTCTACATCTCTTGGTATGTCGTGTATG
ACTTATTCATTTGGAAATAGGGGGCGCTTTCTTGCTGCCTCCCATTGACACTCACGTGAAGTTCTGGGCCCGTGT
CGGCGCCAAACTTGGCGAGCGCGGCATCAATGTATCTTTAGCTATGCTTGAGTACAGTGAGCATTTCATTACCAG
TGAACCTGCCCTACGAAGACAACTGACCCAGACGCTTTCCCGTAAAGCTCTCGTCCCTGCCGCTGCTTTCCCAAC
CCAACTCAAACAAGCGGTGGCTGCCATCAATCACCTCACGAGCCTTGGGGTTAAACCACAAGATATTCAATTGGC
GGGTGATTCGGCTGGTGCGAACTTGATCCTTCAAGTTCTTTCCCACCTCTTGCACCCTCTGGAGTACAAAAATGT
ACCAGCTCTATCTCTTGCTGCACCTTTAAAAGGTGCATACTTGATGTCTCCTTGGGTGGATCTCTCGGATATACA
CGGAACATTCAAGAGCGGTGATCCCACCGACATACTGACTACTGGCACTCTGCGTTACTGGGGTACAGAGATTCT
CAGACCTGTGCCAAAAGAGTACCTCGGTTACGTCGAAGCCAACAGTGCAGGGGATGATTGGTGGAAAGGTGTCGA
TGCCTTGGTTGATCGTGTTCTTATCACGGCAGGTCGGGAAGAATGTCTCAAGGATGAGATTATTCGTTTTAACGC
TGTATTCGAGAACTTCCATGCTCACGTCAAAATGGAGGAACATGATGGTGTACACGACGACCCGCTTTTTGCAGT
GGAACTTGGGGAATCAGGTGAAGGTGCACCAGATATGATCATTGACTGGTTCCGAGCCGGTTACTGA

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