Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|109720
Gene name
Locationscaffold_8:886447..888895
Strand-
Gene length (bp)2448
Transcript length (bp)2046
Coding sequence length (bp)2046
Protein length (aa) 682

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01734 Patatin Patatin-like phospholipase 5.8E-23 13 217
PF00931 NB-ARC NB-ARC domain 2.4E-05 393 586

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9NP80|PLPL8_HUMAN Calcium-independent phospholipase A2-gamma OS=Homo sapiens GN=PNPLA8 PE=1 SV=1 5 334 1.0E-19
sp|Q8K1N1|PLPL8_MOUSE Calcium-independent phospholipase A2-gamma OS=Mus musculus GN=Pnpla8 PE=1 SV=1 5 334 6.0E-19
sp|Q5XTS1|PLPL8_RABIT Calcium-independent phospholipase A2-gamma OS=Oryctolagus cuniculus GN=PNPLA8 PE=1 SV=1 5 334 6.0E-19
sp|F4HX15|LPAI_ARATH Phospholipase A I OS=Arabidopsis thaliana GN=PLA1 PE=2 SV=1 10 293 2.0E-15
sp|O48723|PLP2_ARATH Patatin-like protein 2 OS=Arabidopsis thaliana GN=PLP2 PE=1 SV=1 10 327 6.0E-12
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Swissprot ID Swissprot Description Start End E-value
sp|Q9NP80|PLPL8_HUMAN Calcium-independent phospholipase A2-gamma OS=Homo sapiens GN=PNPLA8 PE=1 SV=1 5 334 1.0E-19
sp|Q8K1N1|PLPL8_MOUSE Calcium-independent phospholipase A2-gamma OS=Mus musculus GN=Pnpla8 PE=1 SV=1 5 334 6.0E-19
sp|Q5XTS1|PLPL8_RABIT Calcium-independent phospholipase A2-gamma OS=Oryctolagus cuniculus GN=PNPLA8 PE=1 SV=1 5 334 6.0E-19
sp|F4HX15|LPAI_ARATH Phospholipase A I OS=Arabidopsis thaliana GN=PLA1 PE=2 SV=1 10 293 2.0E-15
sp|O48723|PLP2_ARATH Patatin-like protein 2 OS=Arabidopsis thaliana GN=PLP2 PE=1 SV=1 10 327 6.0E-12
sp|O23180|PLP5_ARATH Patatin-like protein 5 OS=Arabidopsis thaliana GN=PLP5 PE=1 SV=2 7 312 7.0E-11
sp|O23179|PLP1_ARATH Patatin-like protein 1 OS=Arabidopsis thaliana GN=PLP1 PE=1 SV=2 7 285 3.0E-09
sp|Q84QY3|PLP1_ORYSJ Patatin-like protein 1 OS=Oryza sativa subsp. japonica GN=PLP1 PE=3 SV=1 3 220 1.0E-08
sp|B8AQW7|PLP1_ORYSI Patatin-like protein 1 OS=Oryza sativa subsp. indica GN=PLP1 PE=3 SV=1 3 220 1.0E-08
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GO

GO Term Description Terminal node
GO:0006629 lipid metabolic process Yes
GO:0043531 ADP binding Yes
GO:0008152 metabolic process No
GO:0036094 small molecule binding No
GO:0030554 adenyl nucleotide binding No
GO:1901363 heterocyclic compound binding No
GO:0005488 binding No
GO:0043167 ion binding No
GO:0071704 organic substance metabolic process No
GO:0032559 adenyl ribonucleotide binding No
GO:0008150 biological_process No
GO:0043168 anion binding No
GO:0097159 organic cyclic compound binding No
GO:0017076 purine nucleotide binding No
GO:0097367 carbohydrate derivative binding No
GO:0003674 molecular_function No
GO:1901265 nucleoside phosphate binding No
GO:0044238 primary metabolic process No
GO:0032553 ribonucleotide binding No
GO:0032555 purine ribonucleotide binding No
GO:0000166 nucleotide binding No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.6378 0.4581 0.11 0.1882 0.3325 0.0226 0.061 0.1037 0.1279 0.0026

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Orthologs

Orthofinder run ID1
Orthogroup243
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|016000
Agaricus bisporus var bisporus H39 AgabiH39|474700
Agaricus bisporus var bisporus H39 AgabiH39|447800
Agaricus bisporus var bisporus H39 AgabiH39|447100
Agaricus bisporus var bisporus H39 AgabiH39|373300
Agaricus bisporus var bisporus H39 AgabiH39|481100
Agaricus bisporus var bisporus H39 AgabiH39|281600
Agaricus bisporus var bisporus H39 AgabiH39|278300
Agaricus bisporus var bisporus H39 AgabiH39|053070
Agaricus bisporus var bisporus H39 AgabiH39|371700
Agaricus bisporus var bisporus H97 AgabiH97|109720 (this protein)
Agaricus bisporus var bisporus H97 AgabiH97|016000
Agaricus bisporus var bisporus H97 AgabiH97|016120
Agaricus bisporus var bisporus H97 AgabiH97|020470
Agaricus bisporus var bisporus H97 AgabiH97|052840
Agaricus bisporus var bisporus H97 AgabiH97|052910
Agaricus bisporus var bisporus H97 AgabiH97|053070
Agaricus bisporus var bisporus H97 AgabiH97|054350
Agaricus bisporus var bisporus H97 AgabiH97|089750
Agaricus bisporus var bisporus H97 AgabiH97|109860

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|109720
MTSSAEGPPLRLLALDGGGIRGLSELLIIKEVMHKLMFEENEKRKKDGKEPLSVLPKPCDYFDLIGGTSTGGIIA
LMLGRLRMDVDTAITKYDALAKQVFSAMKPWPWGDGKFRATTLEAAMKSVVKNVTGDSESSLLEGDQAGVCRTFV
CAKNAHNLEIPVLFRTYQSRETHINCKIWEAARATSAAPTFFKRIIIGGDQPFIDGGLGRNNPSQVVLEEANALF
GARQIGCLVSIGTGQARVNEIKKPGFWQRILPTDVIDALRRITTDCESTHEDMLHRFSNLPSTYFRLNVEQGMQE
IALSEWEKLSNVKAHTTQYMRKEEVAKKLGLLVSTIRVPRGQLLLEQIITPRPPNESVPQARERKRCPLPVQPFM
GREEILEKMRKYFELGSDSRRVFVLHGLGGSGKTQIAFKFVQDSTCFSDVFYIDATNEQTLRTDLEAITLGNAER
SVDASLHWLASQREGNWLLFFDNADDVNLKLKKFLPQSGNILVTTRNPELRLLSAKDGDAKVGAMEHEDAKNLLL
DRARAEESYENKVLAEAIVQELHYFALAISQAGAYIHCHLSLSEYREFYRRHHDKLLQTEEFQGGDPYERAVYAT
WSLSYEKLDASARSLLQIFSLLNHEGISEEMFEKAASSEEELEDSELQNKVTELLNELGKRGPDWSWDFKQHSSA
STTVES*
Coding >AgabiH97|109720
ATGACTTCTTCTGCAGAGGGTCCGCCTTTGAGGCTGCTCGCGTTAGATGGCGGTGGGATTCGCGGACTTTCAGAA
CTACTCATCATCAAAGAAGTCATGCACAAGCTGATGTTTGAGGAGAACGAGAAACGGAAAAAGGACGGCAAAGAA
CCTCTTAGCGTACTCCCGAAGCCGTGCGATTACTTCGATCTGATTGGCGGTACTAGTACTGGAGGGATAATTGCT
TTGATGCTTGGGCGTCTCCGGATGGATGTAGACACGGCAATAACAAAGTATGATGCTCTGGCAAAACAAGTCTTC
TCCGCTATGAAGCCATGGCCATGGGGAGACGGAAAATTCAGGGCGACAACACTCGAAGCAGCCATGAAATCTGTT
GTGAAGAACGTAACTGGTGATTCCGAGTCATCCTTATTAGAAGGTGATCAAGCTGGAGTCTGCAGAACTTTCGTC
TGTGCCAAGAACGCCCATAACTTGGAAATTCCAGTGCTTTTCAGGACATACCAGTCTCGTGAAACACATATAAAT
TGCAAGATTTGGGAGGCCGCTCGAGCGACATCTGCGGCACCCACATTTTTCAAGCGCATTATAATTGGGGGGGAC
CAGCCCTTTATCGATGGTGGACTAGGCCGCAATAATCCGAGTCAGGTGGTACTGGAAGAAGCCAATGCTCTATTT
GGCGCTCGTCAAATCGGGTGCTTGGTGAGCATTGGCACTGGACAGGCCAGAGTAAACGAGATCAAGAAACCTGGG
TTCTGGCAGCGAATCCTACCAACCGACGTCATCGATGCGTTAAGGAGAATAACCACCGACTGCGAATCAACACAC
GAAGATATGTTGCACCGTTTCTCCAACTTGCCGAGCACCTATTTTCGGCTAAATGTCGAGCAGGGGATGCAGGAA
ATAGCGCTCTCCGAATGGGAGAAACTTAGCAATGTGAAGGCTCATACAACGCAATATATGAGGAAGGAGGAGGTC
GCCAAGAAGCTTGGCTTGTTGGTTAGTACGATCAGAGTCCCGAGAGGGCAGCTGCTACTCGAGCAAATCATTACT
CCTAGGCCTCCAAACGAATCGGTTCCACAAGCCAGGGAACGCAAGCGTTGTCCGCTTCCTGTGCAACCATTTATG
GGACGAGAGGAAATCCTGGAAAAGATGCGCAAATATTTTGAGTTAGGGAGTGATTCTCGACGCGTCTTCGTTTTG
CATGGTCTTGGGGGTTCCGGTAAGACCCAAATTGCTTTCAAATTTGTGCAAGATTCAACCTGCTTCTCCGACGTC
TTCTACATTGACGCGACCAATGAACAGACTCTTCGAACAGACCTTGAAGCCATCACTCTAGGGAATGCAGAGCGA
TCAGTAGATGCGAGTCTCCATTGGCTTGCAAGCCAGCGTGAGGGAAACTGGCTTCTCTTCTTCGACAACGCGGAC
GATGTGAACTTGAAACTGAAGAAATTCCTTCCTCAATCTGGAAACATCCTGGTTACAACACGTAACCCAGAGCTT
CGCCTTCTTTCCGCGAAAGACGGAGATGCAAAAGTTGGTGCGATGGAGCACGAAGATGCGAAAAATCTGCTGCTG
GATCGGGCTCGGGCAGAAGAGAGCTATGAAAATAAAGTGCTGGCAGAGGCGATTGTACAGGAACTCCATTACTTT
GCTTTGGCTATTTCCCAAGCTGGTGCTTATATTCATTGCCACTTGTCATTAAGCGAATATCGAGAATTCTATCGA
CGTCACCACGACAAACTGTTACAGACTGAAGAGTTTCAGGGAGGAGATCCATACGAACGAGCGGTGTATGCGACG
TGGAGTTTGAGCTACGAGAAACTTGACGCGTCAGCAAGATCTTTGCTCCAAATCTTCTCGTTGCTAAATCACGAA
GGAATCTCGGAGGAAATGTTCGAAAAGGCGGCATCGTCTGAAGAGGAACTGGAGGATTCCGAACTACAAAACAAA
GTGACTGAGTTGTTGAACGAGCTGGGAAAACGAGGTCCAGACTGGTCTTGGGACTTTAAGCAGCATTCATCCGCT
AGTACAACAGTGGAGTCGTAG
Transcript >AgabiH97|109720
ATGACTTCTTCTGCAGAGGGTCCGCCTTTGAGGCTGCTCGCGTTAGATGGCGGTGGGATTCGCGGACTTTCAGAA
CTACTCATCATCAAAGAAGTCATGCACAAGCTGATGTTTGAGGAGAACGAGAAACGGAAAAAGGACGGCAAAGAA
CCTCTTAGCGTACTCCCGAAGCCGTGCGATTACTTCGATCTGATTGGCGGTACTAGTACTGGAGGGATAATTGCT
TTGATGCTTGGGCGTCTCCGGATGGATGTAGACACGGCAATAACAAAGTATGATGCTCTGGCAAAACAAGTCTTC
TCCGCTATGAAGCCATGGCCATGGGGAGACGGAAAATTCAGGGCGACAACACTCGAAGCAGCCATGAAATCTGTT
GTGAAGAACGTAACTGGTGATTCCGAGTCATCCTTATTAGAAGGTGATCAAGCTGGAGTCTGCAGAACTTTCGTC
TGTGCCAAGAACGCCCATAACTTGGAAATTCCAGTGCTTTTCAGGACATACCAGTCTCGTGAAACACATATAAAT
TGCAAGATTTGGGAGGCCGCTCGAGCGACATCTGCGGCACCCACATTTTTCAAGCGCATTATAATTGGGGGGGAC
CAGCCCTTTATCGATGGTGGACTAGGCCGCAATAATCCGAGTCAGGTGGTACTGGAAGAAGCCAATGCTCTATTT
GGCGCTCGTCAAATCGGGTGCTTGGTGAGCATTGGCACTGGACAGGCCAGAGTAAACGAGATCAAGAAACCTGGG
TTCTGGCAGCGAATCCTACCAACCGACGTCATCGATGCGTTAAGGAGAATAACCACCGACTGCGAATCAACACAC
GAAGATATGTTGCACCGTTTCTCCAACTTGCCGAGCACCTATTTTCGGCTAAATGTCGAGCAGGGGATGCAGGAA
ATAGCGCTCTCCGAATGGGAGAAACTTAGCAATGTGAAGGCTCATACAACGCAATATATGAGGAAGGAGGAGGTC
GCCAAGAAGCTTGGCTTGTTGGTTAGTACGATCAGAGTCCCGAGAGGGCAGCTGCTACTCGAGCAAATCATTACT
CCTAGGCCTCCAAACGAATCGGTTCCACAAGCCAGGGAACGCAAGCGTTGTCCGCTTCCTGTGCAACCATTTATG
GGACGAGAGGAAATCCTGGAAAAGATGCGCAAATATTTTGAGTTAGGGAGTGATTCTCGACGCGTCTTCGTTTTG
CATGGTCTTGGGGGTTCCGGTAAGACCCAAATTGCTTTCAAATTTGTGCAAGATTCAACCTGCTTCTCCGACGTC
TTCTACATTGACGCGACCAATGAACAGACTCTTCGAACAGACCTTGAAGCCATCACTCTAGGGAATGCAGAGCGA
TCAGTAGATGCGAGTCTCCATTGGCTTGCAAGCCAGCGTGAGGGAAACTGGCTTCTCTTCTTCGACAACGCGGAC
GATGTGAACTTGAAACTGAAGAAATTCCTTCCTCAATCTGGAAACATCCTGGTTACAACACGTAACCCAGAGCTT
CGCCTTCTTTCCGCGAAAGACGGAGATGCAAAAGTTGGTGCGATGGAGCACGAAGATGCGAAAAATCTGCTGCTG
GATCGGGCTCGGGCAGAAGAGAGCTATGAAAATAAAGTGCTGGCAGAGGCGATTGTACAGGAACTCCATTACTTT
GCTTTGGCTATTTCCCAAGCTGGTGCTTATATTCATTGCCACTTGTCATTAAGCGAATATCGAGAATTCTATCGA
CGTCACCACGACAAACTGTTACAGACTGAAGAGTTTCAGGGAGGAGATCCATACGAACGAGCGGTGTATGCGACG
TGGAGTTTGAGCTACGAGAAACTTGACGCGTCAGCAAGATCTTTGCTCCAAATCTTCTCGTTGCTAAATCACGAA
GGAATCTCGGAGGAAATGTTCGAAAAGGCGGCATCGTCTGAAGAGGAACTGGAGGATTCCGAACTACAAAACAAA
GTGACTGAGTTGTTGAACGAGCTGGGAAAACGAGGTCCAGACTGGTCTTGGGACTTTAAGCAGCATTCATCCGCT
AGTACAACAGTGGAGTCGTAG
Gene >AgabiH97|109720
ATGACTTCTTCTGCAGAGGGTCCGCCTTTGAGGCTGCTCGCGTTAGGTGCATGCGTCCGTTTGCATTCTCTCACC
AATAGAGTGGCTAACTAGTAAACTCTGAACAGATGGCGGTGGGATTCGCGGACTTTCAGAACTACTCATCATCAA
AGAAGTCATGCACAAGCTGATGTTTGAGGAGAACGAGAAACGGAAAAAGGACGGCAAAGAACCTCTTAGCGTACT
CCCGAAGCCGTGCGATTACTTCGATCTGATTGGCGGTACTAGTACTGGAGGGTGCGCTGCGTTATACACCTACAA
TCGTCTCATGTTACTCACATGTATATTACAGGATAATTGCTTTGATGCTTGGGCGTCTCCGGATGGATGTAGACA
CGGCAATAACAAAGTATGATGCTCTGGCAAAACAAGTCTTCTCCGCTATGAAGCCATGGCCATGGGGAGACGGAA
AATTCAGGGCGACAACACTCGAAGCAGCCATGAAATCTGTTGTGAAGAACGTAACTGGTGATTCCGAGTCATCCT
TATTAGAAGGTGATCAAGCTGGAGTCTGCAGAACGTGAGTATATTACTCACTCTTCCATGCATTTGAATTTTGAA
TTCAAAGAATTACTAGTTTCGTCTGTGCCAAGAACGCCCATAACTTGGAAATTCCAGTGCTTTTCAGGACATACC
AGTCTCGTGAAACACATATAAATTGCAAGATTTGGGAGGCCGCTCGAGCGACATCTGCGGCACCCACATTTTTCA
AGCGCATTATAATTGGGGGGGACCAGCCCTTTATCGATGGTGGACTAGGCCGCAATAATCCGAGTCAGGTGGTAC
TGGAAGAAGCCAATGCTCTATTTGGCGCTCGTCAAATCGGGTGCTTGGTGAGCATTGGCACTGGACAGGCCAGAG
TAAACGAGATCAAGAAACCTGGGTTCTGGCAGCGAATCCTACCAACCGACGTCATCGATGCGTTAAGGAGAATAA
CCACCGACTGCGAATCAACACACGAAGATATGTTGCACCGTTTCTCCAACTTGCCGAGCACCTATTTTCGGCTAA
ATGTCGAGCAGGGGATGCAGGAAATAGCGCTCTCCGAATGGGAGAAACTTAGCAATGTGAAGGCTCATACAACGC
AATATATGAGGAAGGAGGAGGTCGCCAAGAAGCTTGGCTTGTTGGTTAGTACGATCAGAGTCCCGAGAGGGCAGC
TGCTACTCGAGCAAATCAGTATGGAAGACTCGCTCTTGTAGATCCTCATAGGAATCTAATCTTGTTACCTAGTTA
CTCCTAGGCCTCCAAACGAATCGGTTCCACAAGCCAGGGAACGCAAGCGTTGTCCGCTTCCTGTGCAACCATTTA
TGGGACGAGAGGAAATCCTGGAAAAGATGCGCAAATATTTTGAGTTAGGGAGTGATTCTCGACGCGTCTTCGTTT
TGCATGGTCTTGGGGGTTCCGGTAAGACCCAAATTGCTTTCAAATTTGTGCAAGATTCAACCTGGTATGATCTTA
CTCTCTACAAATTCGCGACTGGCGACAATTTATATGTTTAATTCCAGCTTCTCCGACGTCTTCTACATTGACGCG
ACCAATGAACAGACTCTTCGAACAGACCTTGAAGCCATCACTCTAGGGAATGCAGAGCGATCAGTAGATGCGAGT
CTCCATTGGCTTGCAAGCCAGCGTGAGGGAAACTGGCTTCTCTTCTTCGACAACGCGGACGATGTGAACTTGAAA
CTGAAGAAATTCCTTCCTCAATCTGGAAACATCCTGGTTACAACACGTAACCCAGAGCTTCGCCTTCTTTCCGCG
AAAGACGGAGATGCAAAAGTTGGTGCGATGGAGCACGAAGATGCGAAAAATCTGCTGCTGGATCGGGCTCGGGCA
GAAGAGAGCTATGAAAATAAAGTGCTGGCAGAGGCGATTGTACAGGTTCTTCTCATTTTCGTTTCTTCAGAAAAC
ACTTTCAGTCTAAAGCACGAGACAGGAACTCCATTACTTTGCTTTGGCTATTTCCCAAGCTGGTGCTTATATTCA
TTGCCACTTGTCATTAAGCGAATATCGAGAATTCTATCGACGTCACCACGACAAACTGTTACAGACTGAAGAGTT
TCAGGGAGGAGATCCATACGAACGAGCGGTGTATGCGACGTGGAGTTTGAGCTACGAGAAACTTGACGCGTCAGC
AAGATCTTTGCTCCAAATCTTCTCGTTGCTAAATCACGAAGGAATCTCGGAGGAAATGTTCGAAAAGGCGGCATC
GTCTGAAGAGGAACTGGAGGATTCCGAACTACAAAACAAAGTGACTGAGTTGTTGAACGAGCTGGGAAAACGAGG
TCCAGACTGGTCTTGGGACTTTAAGCAGGTCAGCAAGCGCCTTCGTTCATATTCGCTCATTGAATATGATGCTCG
AAATCATACCTACAGCATTCATCCGCTAGTACAACAGTGGAGTCGTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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