Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|108080
Gene name
Locationscaffold_8:473986..474928
Strand-
Gene length (bp)942
Transcript length (bp)942
Coding sequence length (bp)942
Protein length (aa) 314

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08284 RVP_2 Retroviral aspartyl protease 2.1E-09 34 133
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 3.0E-07 32 117
PF13650 Asp_protease_2 Aspartyl protease 5.0E-06 31 115

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q86TG7|PEG10_HUMAN Retrotransposon-derived protein PEG10 OS=Homo sapiens GN=PEG10 PE=1 SV=2 8 282 1.0E-09
sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY3B-I PE=3 SV=2 218 278 9.0E-09
sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY3B-G PE=1 SV=3 218 278 1.0E-08
sp|P0CT38|TF25_SCHPO Transposon Tf2-5 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-5 PE=3 SV=1 30 273 6.0E-08
sp|P0CT41|TF212_SCHPO Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-12 PE=3 SV=1 30 273 6.0E-08
[Show all]
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Swissprot ID Swissprot Description Start End E-value
sp|Q86TG7|PEG10_HUMAN Retrotransposon-derived protein PEG10 OS=Homo sapiens GN=PEG10 PE=1 SV=2 8 282 1.0E-09
sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY3B-I PE=3 SV=2 218 278 9.0E-09
sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY3B-G PE=1 SV=3 218 278 1.0E-08
sp|P0CT38|TF25_SCHPO Transposon Tf2-5 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-5 PE=3 SV=1 30 273 6.0E-08
sp|P0CT41|TF212_SCHPO Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-12 PE=3 SV=1 30 273 6.0E-08
sp|P0CT36|TF23_SCHPO Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-3 PE=1 SV=1 30 273 6.0E-08
sp|P0CT39|TF26_SCHPO Transposon Tf2-6 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-6 PE=3 SV=1 30 273 6.0E-08
sp|P0CT34|TF21_SCHPO Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-1 PE=3 SV=1 30 273 6.0E-08
sp|P0CT35|TF22_SCHPO Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-2 PE=3 SV=1 30 273 6.0E-08
sp|P0CT37|TF24_SCHPO Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-4 PE=3 SV=1 30 273 6.0E-08
sp|P0CT40|TF29_SCHPO Transposon Tf2-9 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-9 PE=3 SV=1 30 273 6.0E-08
sp|P0CT42|TF27_SCHPO Transposon Tf2-7 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-7 PE=3 SV=1 30 273 6.0E-08
sp|P0CT43|TF28_SCHPO Transposon Tf2-8 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-8 PE=3 SV=1 30 273 6.0E-08
sp|P20825|POL2_DROME Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster GN=pol PE=3 SV=1 108 279 8.0E-08
sp|Q9UR07|TF211_SCHPO Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-11 PE=3 SV=1 30 273 9.0E-08
sp|P03555|POL_CAMVC Enzymatic polyprotein OS=Cauliflower mosaic virus (strain CM-1841) GN=ORF V PE=3 SV=1 17 278 2.0E-07
sp|P03554|POL_CAMVS Enzymatic polyprotein OS=Cauliflower mosaic virus (strain Strasbourg) GN=ORF V PE=3 SV=1 17 278 6.0E-07
sp|P03556|POL_CAMVD Enzymatic polyprotein OS=Cauliflower mosaic virus (strain D/H) GN=ORF V PE=3 SV=1 17 278 4.0E-06
sp|Q02964|POL_CAMVE Enzymatic polyprotein OS=Cauliflower mosaic virus (strain BBC) GN=ORF V PE=3 SV=1 17 278 4.0E-06
sp|Q7TN75|PEG10_MOUSE Retrotransposon-derived protein PEG10 OS=Mus musculus GN=Peg10 PE=1 SV=2 8 133 5.0E-06
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GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Nucleus 0.5178 0.574 0.2978 0.0743 0.3366 0.0203 0.193 0.1888 0.044 0.1223

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Orthologs

Orthofinder run ID1
Orthogroup62
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|203700
Agaricus bisporus var bisporus H39 AgabiH39|543800
Agaricus bisporus var bisporus H39 AgabiH39|541900
Agaricus bisporus var bisporus H39 AgabiH39|484000
Agaricus bisporus var bisporus H39 AgabiH39|482700
Agaricus bisporus var bisporus H39 AgabiH39|465600
Agaricus bisporus var bisporus H39 AgabiH39|458400
Agaricus bisporus var bisporus H39 AgabiH39|442600
Agaricus bisporus var bisporus H39 AgabiH39|440000
Agaricus bisporus var bisporus H39 AgabiH39|431100
Agaricus bisporus var bisporus H39 AgabiH39|423100
Agaricus bisporus var bisporus H39 AgabiH39|407200
Agaricus bisporus var bisporus H39 AgabiH39|397400
Agaricus bisporus var bisporus H39 AgabiH39|367300
Agaricus bisporus var bisporus H39 AgabiH39|471500
Agaricus bisporus var bisporus H39 AgabiH39|365700
Agaricus bisporus var bisporus H39 AgabiH39|366200
Agaricus bisporus var bisporus H39 AgabiH39|220000
Agaricus bisporus var bisporus H39 AgabiH39|223400
Agaricus bisporus var bisporus H39 AgabiH39|231200
Agaricus bisporus var bisporus H39 AgabiH39|240600
Agaricus bisporus var bisporus H39 AgabiH39|225300
Agaricus bisporus var bisporus H39 AgabiH39|303300
Agaricus bisporus var bisporus H39 AgabiH39|310900
Agaricus bisporus var bisporus H39 AgabiH39|337900
Agaricus bisporus var bisporus H39 AgabiH39|363700
Agaricus bisporus var bisporus H39 AgabiH39|364000
Agaricus bisporus var bisporus H39 AgabiH39|288000
Agaricus bisporus var bisporus H97 AgabiH97|048890
Agaricus bisporus var bisporus H97 AgabiH97|078540
Agaricus bisporus var bisporus H97 AgabiH97|051180
Agaricus bisporus var bisporus H97 AgabiH97|059850
Agaricus bisporus var bisporus H97 AgabiH97|059860
Agaricus bisporus var bisporus H97 AgabiH97|059920
Agaricus bisporus var bisporus H97 AgabiH97|060470
Agaricus bisporus var bisporus H97 AgabiH97|076080
Agaricus bisporus var bisporus H97 AgabiH97|078600
Agaricus bisporus var bisporus H97 AgabiH97|108240
Agaricus bisporus var bisporus H97 AgabiH97|082340
Agaricus bisporus var bisporus H97 AgabiH97|084900
Agaricus bisporus var bisporus H97 AgabiH97|107880
Agaricus bisporus var bisporus H97 AgabiH97|108080 (this protein)
Agaricus bisporus var bisporus H97 AgabiH97|110130
Agaricus bisporus var bisporus H97 AgabiH97|117630
Agaricus bisporus var bisporus H97 AgabiH97|118430
Agaricus bisporus var bisporus H97 AgabiH97|048870
Agaricus bisporus var bisporus H97 AgabiH97|082290
Agaricus bisporus var bisporus H97 AgabiH97|048860
Agaricus bisporus var bisporus H97 AgabiH97|013380
Agaricus bisporus var bisporus H97 AgabiH97|044800
Agaricus bisporus var bisporus H97 AgabiH97|012380
Agaricus bisporus var bisporus H97 AgabiH97|012440
Agaricus bisporus var bisporus H97 AgabiH97|012730
Agaricus bisporus var bisporus H97 AgabiH97|012750
Agaricus bisporus var bisporus H97 AgabiH97|012780
Agaricus bisporus var bisporus H97 AgabiH97|013210
Agaricus bisporus var bisporus H97 AgabiH97|119550
Agaricus bisporus var bisporus H97 AgabiH97|013410
Agaricus bisporus var bisporus H97 AgabiH97|044810
Agaricus bisporus var bisporus H97 AgabiH97|016500
Agaricus bisporus var bisporus H97 AgabiH97|020610
Agaricus bisporus var bisporus H97 AgabiH97|025620
Agaricus bisporus var bisporus H97 AgabiH97|025630
Agaricus bisporus var bisporus H97 AgabiH97|032380
Agaricus bisporus var bisporus H97 AgabiH97|039690
Agaricus bisporus var bisporus H97 AgabiH97|039850
Agaricus bisporus var bisporus H97 AgabiH97|040720
Agaricus bisporus var bisporus H97 AgabiH97|041140
Agaricus bisporus var bisporus H97 AgabiH97|016510
Agaricus bisporus var bisporus H97 AgabiH97|119560

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|108080
MNNRYVVPQKRLGVQELEVKPLLTTTNRKKLKVSAMVDSGCTHTCIDEGLVKKKKIPTKKLERLITCRNSDGTIA
GKKDITKFAKIDLNINGHNEQLDAVVTPLQSSDLFLGHDWLTNHNPEINWKQGMIKFNRCPTSCSFPHTDISFEP
RIRRLQSNEDTEEKEPDPTNPEDLPAYMKPFAHLFNRKNFDKLPERTEWDHEINFTENAPTEISSKVYSMTPLER
EELDKFLDENLATNRIRPSKSPYAAPCFFVPKKDGSLRLCQDYRKLNEITIKDKTVRTLPECHGVTLSHLSHILL
HNNFPLLLQFDGG*
Coding >AgabiH97|108080
ATGAACAATCGATACGTTGTCCCTCAAAAACGTCTAGGAGTGCAAGAACTGGAAGTAAAACCCCTCCTCACCACA
ACAAACAGAAAGAAACTCAAAGTCTCAGCCATGGTCGACTCGGGATGCACACACACATGTATCGACGAAGGATTA
GTAAAGAAGAAGAAAATCCCAACGAAGAAATTGGAACGGCTGATCACATGCAGGAACTCAGATGGAACGATAGCA
GGAAAGAAGGATATCACCAAATTCGCGAAGATAGATCTAAACATCAACGGTCATAACGAGCAACTGGACGCGGTC
GTCACTCCATTACAATCCTCCGACCTCTTTCTAGGTCATGATTGGTTAACGAACCACAACCCCGAAATCAATTGG
AAACAAGGAATGATCAAATTCAACCGGTGCCCCACATCATGTTCTTTTCCCCATACCGACATCTCTTTCGAACCA
CGTATACGACGATTACAGTCAAACGAAGACACTGAGGAAAAAGAACCGGATCCAACGAACCCTGAGGACTTACCA
GCATACATGAAACCCTTCGCCCATCTTTTCAACAGAAAGAACTTCGACAAACTGCCTGAACGAACGGAATGGGAT
CACGAAATTAACTTCACGGAAAACGCACCAACGGAGATATCATCAAAGGTTTATAGCATGACACCACTGGAGAGA
GAAGAACTGGACAAATTCTTGGATGAAAATCTGGCTACCAATCGAATCCGACCATCGAAATCACCCTATGCAGCA
CCATGTTTTTTCGTTCCCAAGAAAGACGGTTCACTACGGTTATGTCAGGATTATAGGAAACTGAACGAAATCACG
ATCAAAGACAAGACTGTTAGAACTTTGCCAGAATGTCACGGCGTCACGCTGTCACATCTGTCACACATTTTATTA
CATAATAATTTCCCTCTGCTGCTACAGTTCGACGGAGGCTAA
Transcript >AgabiH97|108080
ATGAACAATCGATACGTTGTCCCTCAAAAACGTCTAGGAGTGCAAGAACTGGAAGTAAAACCCCTCCTCACCACA
ACAAACAGAAAGAAACTCAAAGTCTCAGCCATGGTCGACTCGGGATGCACACACACATGTATCGACGAAGGATTA
GTAAAGAAGAAGAAAATCCCAACGAAGAAATTGGAACGGCTGATCACATGCAGGAACTCAGATGGAACGATAGCA
GGAAAGAAGGATATCACCAAATTCGCGAAGATAGATCTAAACATCAACGGTCATAACGAGCAACTGGACGCGGTC
GTCACTCCATTACAATCCTCCGACCTCTTTCTAGGTCATGATTGGTTAACGAACCACAACCCCGAAATCAATTGG
AAACAAGGAATGATCAAATTCAACCGGTGCCCCACATCATGTTCTTTTCCCCATACCGACATCTCTTTCGAACCA
CGTATACGACGATTACAGTCAAACGAAGACACTGAGGAAAAAGAACCGGATCCAACGAACCCTGAGGACTTACCA
GCATACATGAAACCCTTCGCCCATCTTTTCAACAGAAAGAACTTCGACAAACTGCCTGAACGAACGGAATGGGAT
CACGAAATTAACTTCACGGAAAACGCACCAACGGAGATATCATCAAAGGTTTATAGCATGACACCACTGGAGAGA
GAAGAACTGGACAAATTCTTGGATGAAAATCTGGCTACCAATCGAATCCGACCATCGAAATCACCCTATGCAGCA
CCATGTTTTTTCGTTCCCAAGAAAGACGGTTCACTACGGTTATGTCAGGATTATAGGAAACTGAACGAAATCACG
ATCAAAGACAAGACTGTTAGAACTTTGCCAGAATGTCACGGCGTCACGCTGTCACATCTGTCACACATTTTATTA
CATAATAATTTCCCTCTGCTGCTACAGTTCGACGGAGGCTAA
Gene >AgabiH97|108080
ATGAACAATCGATACGTTGTCCCTCAAAAACGTCTAGGAGTGCAAGAACTGGAAGTAAAACCCCTCCTCACCACA
ACAAACAGAAAGAAACTCAAAGTCTCAGCCATGGTCGACTCGGGATGCACACACACATGTATCGACGAAGGATTA
GTAAAGAAGAAGAAAATCCCAACGAAGAAATTGGAACGGCTGATCACATGCAGGAACTCAGATGGAACGATAGCA
GGAAAGAAGGATATCACCAAATTCGCGAAGATAGATCTAAACATCAACGGTCATAACGAGCAACTGGACGCGGTC
GTCACTCCATTACAATCCTCCGACCTCTTTCTAGGTCATGATTGGTTAACGAACCACAACCCCGAAATCAATTGG
AAACAAGGAATGATCAAATTCAACCGGTGCCCCACATCATGTTCTTTTCCCCATACCGACATCTCTTTCGAACCA
CGTATACGACGATTACAGTCAAACGAAGACACTGAGGAAAAAGAACCGGATCCAACGAACCCTGAGGACTTACCA
GCATACATGAAACCCTTCGCCCATCTTTTCAACAGAAAGAACTTCGACAAACTGCCTGAACGAACGGAATGGGAT
CACGAAATTAACTTCACGGAAAACGCACCAACGGAGATATCATCAAAGGTTTATAGCATGACACCACTGGAGAGA
GAAGAACTGGACAAATTCTTGGATGAAAATCTGGCTACCAATCGAATCCGACCATCGAAATCACCCTATGCAGCA
CCATGTTTTTTCGTTCCCAAGAAAGACGGTTCACTACGGTTATGTCAGGATTATAGGAAACTGAACGAAATCACG
ATCAAAGACAAGACTGTTAGAACTTTGCCAGAATGTCACGGCGTCACGCTGTCACATCTGTCACACATTTTATTA
CATAATAATTTCCCTCTGCTGCTACAGTTCGACGGAGGCTAA

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