Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|107800
Gene name
Locationscaffold_8:405098..406007
Strand+
Gene length (bp)909
Transcript length (bp)909
Coding sequence length (bp)909
Protein length (aa) 303

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 1.7E-07 166 253
PF13650 Asp_protease_2 Aspartyl protease 2.6E-07 166 255

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 35 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|107800
MKPVVEFPPLPAKYFKEEKKGPSYKQQAKIEEGISIEEMLEKFGETEIKLSQKELLGMAPKLREALKDLLSKRRV
PTGNNNIVVDRDQEEEQLDWTYASLNKLGTVQKIQTEAKNREGNPVKVWKVKEPLTQYLTAVPAEKQERLVFTIE
KEESQSAETMGELRVIPATINGVREEEALLDSGSQIVTMSREAASECKLAWDPSMAINMQSANGGITQTCGLAKN
VPFLFGTITAYLQVHVIEDAPYRVLLGRPFDVLLESKITNSGTGHQFITITDPNTKEWASLATYAKGELPRTLET
NF*
Coding >AgabiH97|107800
ATGAAACCGGTAGTAGAATTTCCCCCTCTACCAGCTAAGTACTTCAAAGAAGAAAAGAAAGGACCTAGCTACAAG
CAACAAGCAAAGATTGAGGAGGGTATTAGTATCGAAGAAATGTTAGAAAAATTCGGAGAAACTGAGATAAAGCTC
TCGCAGAAAGAGCTTCTGGGAATGGCGCCGAAGCTTCGCGAAGCGCTTAAAGATTTACTCAGTAAAAGAAGAGTA
CCTACTGGTAACAACAATATTGTTGTTGATAGAGATCAAGAAGAAGAACAGCTTGATTGGACCTACGCTAGTCTC
AACAAGCTAGGGACGGTACAAAAGATACAGACAGAAGCTAAGAATAGAGAAGGGAACCCAGTGAAAGTTTGGAAA
GTTAAAGAACCTCTGACGCAGTACTTAACAGCGGTACCAGCCGAAAAGCAAGAGAGATTGGTGTTCACCATAGAA
AAAGAGGAGTCTCAGAGCGCCGAGACAATGGGGGAGTTACGCGTAATACCAGCAACTATTAACGGAGTCCGTGAG
GAAGAAGCGTTGTTGGATAGTGGATCTCAGATTGTCACGATGAGTAGAGAGGCCGCTAGTGAATGTAAGCTAGCA
TGGGACCCATCTATGGCGATTAATATGCAAAGCGCTAATGGAGGGATCACCCAAACATGTGGGCTAGCTAAGAAT
GTTCCCTTCCTCTTCGGAACAATCACGGCGTATCTACAAGTGCATGTTATCGAAGATGCACCTTATCGAGTACTA
CTAGGGAGACCGTTTGATGTTCTACTAGAAAGTAAGATAACGAACTCAGGAACAGGGCACCAGTTCATCACCATA
ACTGACCCAAATACCAAAGAATGGGCCTCGCTAGCTACCTATGCAAAAGGGGAGCTACCGAGGACATTGGAAACA
AATTTTTAA
Transcript >AgabiH97|107800
ATGAAACCGGTAGTAGAATTTCCCCCTCTACCAGCTAAGTACTTCAAAGAAGAAAAGAAAGGACCTAGCTACAAG
CAACAAGCAAAGATTGAGGAGGGTATTAGTATCGAAGAAATGTTAGAAAAATTCGGAGAAACTGAGATAAAGCTC
TCGCAGAAAGAGCTTCTGGGAATGGCGCCGAAGCTTCGCGAAGCGCTTAAAGATTTACTCAGTAAAAGAAGAGTA
CCTACTGGTAACAACAATATTGTTGTTGATAGAGATCAAGAAGAAGAACAGCTTGATTGGACCTACGCTAGTCTC
AACAAGCTAGGGACGGTACAAAAGATACAGACAGAAGCTAAGAATAGAGAAGGGAACCCAGTGAAAGTTTGGAAA
GTTAAAGAACCTCTGACGCAGTACTTAACAGCGGTACCAGCCGAAAAGCAAGAGAGATTGGTGTTCACCATAGAA
AAAGAGGAGTCTCAGAGCGCCGAGACAATGGGGGAGTTACGCGTAATACCAGCAACTATTAACGGAGTCCGTGAG
GAAGAAGCGTTGTTGGATAGTGGATCTCAGATTGTCACGATGAGTAGAGAGGCCGCTAGTGAATGTAAGCTAGCA
TGGGACCCATCTATGGCGATTAATATGCAAAGCGCTAATGGAGGGATCACCCAAACATGTGGGCTAGCTAAGAAT
GTTCCCTTCCTCTTCGGAACAATCACGGCGTATCTACAAGTGCATGTTATCGAAGATGCACCTTATCGAGTACTA
CTAGGGAGACCGTTTGATGTTCTACTAGAAAGTAAGATAACGAACTCAGGAACAGGGCACCAGTTCATCACCATA
ACTGACCCAAATACCAAAGAATGGGCCTCGCTAGCTACCTATGCAAAAGGGGAGCTACCGAGGACATTGGAAACA
AATTTTTAA
Gene >AgabiH97|107800
ATGAAACCGGTAGTAGAATTTCCCCCTCTACCAGCTAAGTACTTCAAAGAAGAAAAGAAAGGACCTAGCTACAAG
CAACAAGCAAAGATTGAGGAGGGTATTAGTATCGAAGAAATGTTAGAAAAATTCGGAGAAACTGAGATAAAGCTC
TCGCAGAAAGAGCTTCTGGGAATGGCGCCGAAGCTTCGCGAAGCGCTTAAAGATTTACTCAGTAAAAGAAGAGTA
CCTACTGGTAACAACAATATTGTTGTTGATAGAGATCAAGAAGAAGAACAGCTTGATTGGACCTACGCTAGTCTC
AACAAGCTAGGGACGGTACAAAAGATACAGACAGAAGCTAAGAATAGAGAAGGGAACCCAGTGAAAGTTTGGAAA
GTTAAAGAACCTCTGACGCAGTACTTAACAGCGGTACCAGCCGAAAAGCAAGAGAGATTGGTGTTCACCATAGAA
AAAGAGGAGTCTCAGAGCGCCGAGACAATGGGGGAGTTACGCGTAATACCAGCAACTATTAACGGAGTCCGTGAG
GAAGAAGCGTTGTTGGATAGTGGATCTCAGATTGTCACGATGAGTAGAGAGGCCGCTAGTGAATGTAAGCTAGCA
TGGGACCCATCTATGGCGATTAATATGCAAAGCGCTAATGGAGGGATCACCCAAACATGTGGGCTAGCTAAGAAT
GTTCCCTTCCTCTTCGGAACAATCACGGCGTATCTACAAGTGCATGTTATCGAAGATGCACCTTATCGAGTACTA
CTAGGGAGACCGTTTGATGTTCTACTAGAAAGTAAGATAACGAACTCAGGAACAGGGCACCAGTTCATCACCATA
ACTGACCCAAATACCAAAGAATGGGCCTCGCTAGCTACCTATGCAAAAGGGGAGCTACCGAGGACATTGGAAACA
AATTTTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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