Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|107800
Gene name
Locationscaffold_8:405098..406007
Strand+
Gene length (bp)909
Transcript length (bp)909
Coding sequence length (bp)909
Protein length (aa) 303

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 1.7E-07 166 253
PF13650 Asp_protease_2 Aspartyl protease 2.6E-07 166 255

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Nucleus Nuclear localization signal 0.5098 0.622 0.3674 0.0862 0.0212 0.0372 0.0447 0.1547 0.033 0.0023

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Orthologs

Orthofinder run ID1
Orthogroup85
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|291900
Agaricus bisporus var bisporus H97 AgabiH97|039720
Agaricus bisporus var bisporus H97 AgabiH97|086810
Agaricus bisporus var bisporus H97 AgabiH97|089510
Agaricus bisporus var bisporus H97 AgabiH97|098710
Agaricus bisporus var bisporus H97 AgabiH97|107800 (this protein)
Rhodonia placenta FPRL280 RhoplFPRL280|1232_2
Rhodonia placenta FPRL280 RhoplFPRL280|1518_2

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|107800
MKPVVEFPPLPAKYFKEEKKGPSYKQQAKIEEGISIEEMLEKFGETEIKLSQKELLGMAPKLREALKDLLSKRRV
PTGNNNIVVDRDQEEEQLDWTYASLNKLGTVQKIQTEAKNREGNPVKVWKVKEPLTQYLTAVPAEKQERLVFTIE
KEESQSAETMGELRVIPATINGVREEEALLDSGSQIVTMSREAASECKLAWDPSMAINMQSANGGITQTCGLAKN
VPFLFGTITAYLQVHVIEDAPYRVLLGRPFDVLLESKITNSGTGHQFITITDPNTKEWASLATYAKGELPRTLET
NF*
Coding >AgabiH97|107800
ATGAAACCGGTAGTAGAATTTCCCCCTCTACCAGCTAAGTACTTCAAAGAAGAAAAGAAAGGACCTAGCTACAAG
CAACAAGCAAAGATTGAGGAGGGTATTAGTATCGAAGAAATGTTAGAAAAATTCGGAGAAACTGAGATAAAGCTC
TCGCAGAAAGAGCTTCTGGGAATGGCGCCGAAGCTTCGCGAAGCGCTTAAAGATTTACTCAGTAAAAGAAGAGTA
CCTACTGGTAACAACAATATTGTTGTTGATAGAGATCAAGAAGAAGAACAGCTTGATTGGACCTACGCTAGTCTC
AACAAGCTAGGGACGGTACAAAAGATACAGACAGAAGCTAAGAATAGAGAAGGGAACCCAGTGAAAGTTTGGAAA
GTTAAAGAACCTCTGACGCAGTACTTAACAGCGGTACCAGCCGAAAAGCAAGAGAGATTGGTGTTCACCATAGAA
AAAGAGGAGTCTCAGAGCGCCGAGACAATGGGGGAGTTACGCGTAATACCAGCAACTATTAACGGAGTCCGTGAG
GAAGAAGCGTTGTTGGATAGTGGATCTCAGATTGTCACGATGAGTAGAGAGGCCGCTAGTGAATGTAAGCTAGCA
TGGGACCCATCTATGGCGATTAATATGCAAAGCGCTAATGGAGGGATCACCCAAACATGTGGGCTAGCTAAGAAT
GTTCCCTTCCTCTTCGGAACAATCACGGCGTATCTACAAGTGCATGTTATCGAAGATGCACCTTATCGAGTACTA
CTAGGGAGACCGTTTGATGTTCTACTAGAAAGTAAGATAACGAACTCAGGAACAGGGCACCAGTTCATCACCATA
ACTGACCCAAATACCAAAGAATGGGCCTCGCTAGCTACCTATGCAAAAGGGGAGCTACCGAGGACATTGGAAACA
AATTTTTAA
Transcript >AgabiH97|107800
ATGAAACCGGTAGTAGAATTTCCCCCTCTACCAGCTAAGTACTTCAAAGAAGAAAAGAAAGGACCTAGCTACAAG
CAACAAGCAAAGATTGAGGAGGGTATTAGTATCGAAGAAATGTTAGAAAAATTCGGAGAAACTGAGATAAAGCTC
TCGCAGAAAGAGCTTCTGGGAATGGCGCCGAAGCTTCGCGAAGCGCTTAAAGATTTACTCAGTAAAAGAAGAGTA
CCTACTGGTAACAACAATATTGTTGTTGATAGAGATCAAGAAGAAGAACAGCTTGATTGGACCTACGCTAGTCTC
AACAAGCTAGGGACGGTACAAAAGATACAGACAGAAGCTAAGAATAGAGAAGGGAACCCAGTGAAAGTTTGGAAA
GTTAAAGAACCTCTGACGCAGTACTTAACAGCGGTACCAGCCGAAAAGCAAGAGAGATTGGTGTTCACCATAGAA
AAAGAGGAGTCTCAGAGCGCCGAGACAATGGGGGAGTTACGCGTAATACCAGCAACTATTAACGGAGTCCGTGAG
GAAGAAGCGTTGTTGGATAGTGGATCTCAGATTGTCACGATGAGTAGAGAGGCCGCTAGTGAATGTAAGCTAGCA
TGGGACCCATCTATGGCGATTAATATGCAAAGCGCTAATGGAGGGATCACCCAAACATGTGGGCTAGCTAAGAAT
GTTCCCTTCCTCTTCGGAACAATCACGGCGTATCTACAAGTGCATGTTATCGAAGATGCACCTTATCGAGTACTA
CTAGGGAGACCGTTTGATGTTCTACTAGAAAGTAAGATAACGAACTCAGGAACAGGGCACCAGTTCATCACCATA
ACTGACCCAAATACCAAAGAATGGGCCTCGCTAGCTACCTATGCAAAAGGGGAGCTACCGAGGACATTGGAAACA
AATTTTTAA
Gene >AgabiH97|107800
ATGAAACCGGTAGTAGAATTTCCCCCTCTACCAGCTAAGTACTTCAAAGAAGAAAAGAAAGGACCTAGCTACAAG
CAACAAGCAAAGATTGAGGAGGGTATTAGTATCGAAGAAATGTTAGAAAAATTCGGAGAAACTGAGATAAAGCTC
TCGCAGAAAGAGCTTCTGGGAATGGCGCCGAAGCTTCGCGAAGCGCTTAAAGATTTACTCAGTAAAAGAAGAGTA
CCTACTGGTAACAACAATATTGTTGTTGATAGAGATCAAGAAGAAGAACAGCTTGATTGGACCTACGCTAGTCTC
AACAAGCTAGGGACGGTACAAAAGATACAGACAGAAGCTAAGAATAGAGAAGGGAACCCAGTGAAAGTTTGGAAA
GTTAAAGAACCTCTGACGCAGTACTTAACAGCGGTACCAGCCGAAAAGCAAGAGAGATTGGTGTTCACCATAGAA
AAAGAGGAGTCTCAGAGCGCCGAGACAATGGGGGAGTTACGCGTAATACCAGCAACTATTAACGGAGTCCGTGAG
GAAGAAGCGTTGTTGGATAGTGGATCTCAGATTGTCACGATGAGTAGAGAGGCCGCTAGTGAATGTAAGCTAGCA
TGGGACCCATCTATGGCGATTAATATGCAAAGCGCTAATGGAGGGATCACCCAAACATGTGGGCTAGCTAAGAAT
GTTCCCTTCCTCTTCGGAACAATCACGGCGTATCTACAAGTGCATGTTATCGAAGATGCACCTTATCGAGTACTA
CTAGGGAGACCGTTTGATGTTCTACTAGAAAGTAAGATAACGAACTCAGGAACAGGGCACCAGTTCATCACCATA
ACTGACCCAAATACCAAAGAATGGGCCTCGCTAGCTACCTATGCAAAAGGGGAGCTACCGAGGACATTGGAAACA
AATTTTTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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